NEW
Try the new Transcript table
These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001282971.2 → NP_001269900.1 protein MTSS 1 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC090198, AJ710067, AK027015, DA790325
- Consensus CDS
-
CCDS64969.1
- UniProtKB/TrEMBL
-
A5YM41
- Related
- ENSP00000322804.5, ENST00000325064.9
- Conserved Domains (3) summary
-
- cd07643
Location:7 → 241
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- PHA03247
Location:330 → 729
- PHA03247; large tegument protein UL36; Provisional
- cd22060
Location:728 → 758
- WH2_MTSS1; Wiskott Aldrich syndrome homology region 2 (WH2 motif) found in Metastasis suppressor protein 1 (MTSS-1)
-
NM_001282974.2 → NP_001269903.1 protein MTSS 1 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) has multiple differences in the coding region but maintains the reading frame, compared to variant 1. This variant encodes isoform 3, which is shorter than isoform 1.
- Source sequence(s)
-
AC090198, AF086645, AJ710067, DA790325, EF560715
- Consensus CDS
-
CCDS64968.1
- UniProtKB/TrEMBL
-
A5YM41
- Related
- ENSP00000367256.3, ENST00000378017.7
- Conserved Domains (3) summary
-
- cd07643
Location:7 → 237
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- PHA03247
Location:400 → 700
- PHA03247; large tegument protein UL36; Provisional
- cd22060
Location:699 → 729
- WH2_MTSS1; Wiskott Aldrich syndrome homology region 2 (WH2 motif) found in Metastasis suppressor protein 1 (MTSS-1)
-
NM_001363294.2 → NP_001350223.1 protein MTSS 1 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AC090198, AF086645, AJ710067, CN348724, DA790325
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (3) summary
-
- cd07643
Location:7 → 237
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- pfam02205
Location:723 → 749
- WH2; WH2 motif
- cl26464
Location:325 → 724
- Atrophin-1; Atrophin-1 family
-
NM_001363295.2 → NP_001350224.1 protein MTSS 1 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC090198, AF086645, AJ710067, DA447614, DA790325
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (3) summary
-
- cd07643
Location:7 → 237
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- PHA03247
Location:326 → 708
- PHA03247; large tegument protein UL36; Provisional
- cd22060
Location:707 → 737
- WH2_MTSS1; Wiskott Aldrich syndrome homology region 2 (WH2 motif) found in Metastasis suppressor protein 1 (MTSS-1)
-
NM_001363296.2 → NP_001350225.1 protein MTSS 1 isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC090198, AJ710067, AK027015, BY993850, DA227466, DA785323, DA790325
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (3) summary
-
- cd07643
Location:7 → 241
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- PHA03247
Location:404 → 704
- PHA03247; large tegument protein UL36; Provisional
- cd22060
Location:703 → 733
- WH2_MTSS1; Wiskott Aldrich syndrome homology region 2 (WH2 motif) found in Metastasis suppressor protein 1 (MTSS-1)
-
NM_001363297.2 → NP_001350226.1 protein MTSS 1 isoform 7
Status: VALIDATED
- Source sequence(s)
-
AC090198, AJ710067, AK027015, BY993850, DA227466, DA785323, DA790325
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (4) summary
-
- cd07643
Location:7 → 241
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- pfam03276
Location:567 → 695
- Gag_spuma; Spumavirus gag protein
- pfam02205
Location:702 → 728
- WH2; WH2 motif
- cl26464
Location:403 → 703
- Atrophin-1; Atrophin-1 family
-
NM_001363298.2 → NP_001350227.1 protein MTSS 1 isoform 8
Status: VALIDATED
- Source sequence(s)
-
AC090198, AJ710067, AK027015, BY993850, DA225605, DA227466, DA785323, DA790325
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (4) summary
-
- cd07643
Location:7 → 237
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- pfam03276
Location:563 → 691
- Gag_spuma; Spumavirus gag protein
- pfam02205
Location:698 → 724
- WH2; WH2 motif
- cl26464
Location:399 → 699
- Atrophin-1; Atrophin-1 family
-
NM_001363299.2 → NP_001350228.1 protein MTSS 1 isoform 9
Status: VALIDATED
- Source sequence(s)
-
AC090198, AJ710067, AK027015, BU145296, BY993850, DA785323, DA790325, HY339502
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (2) summary
-
- cd07643
Location:7 → 241
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- cl26464
Location:338 → 664
- Atrophin-1; Atrophin-1 family
-
NM_001363300.2 → NP_001350229.1 protein MTSS 1 isoform 10
Status: VALIDATED
- Source sequence(s)
-
AC090198, AJ710067, AK027015, BU145296, BY993850, DA785323, DA790325, HY339502
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (2) summary
-
- cd07643
Location:7 → 237
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- cl26464
Location:334 → 660
- Atrophin-1; Atrophin-1 family
-
NM_001363301.2 → NP_001350230.1 protein MTSS 1 isoform 11
Status: VALIDATED
- Source sequence(s)
-
AC090198, AJ710067, AK027015, BU145296, BY993850, DA785323, DA790325, HY339502
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (3) summary
-
- cd07643
Location:7 → 237
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- pfam02205
Location:658 → 684
- WH2; WH2 motif
- cl26464
Location:333 → 659
- Atrophin-1; Atrophin-1 family
-
NM_001363302.2 → NP_001350231.1 protein MTSS 1 isoform 12
Status: VALIDATED
- Source sequence(s)
-
AC090198, AF086645, AJ710067, DA790325
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (2) summary
-
- cd07643
Location:7 → 237
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- cl26464
Location:326 → 644
- Atrophin-1; Atrophin-1 family
-
NM_014751.6 → NP_055566.3 protein MTSS 1 isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an in-frame exon in the central coding region compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AC090198, AF086645, AJ710067, DA790325
- Consensus CDS
-
CCDS6353.1
- UniProtKB/Swiss-Prot
- J3KNK6, O43312, Q8TCA2, Q96RX2
- UniProtKB/TrEMBL
-
A5YM41
- Related
- ENSP00000429064.1, ENST00000518547.6
- Conserved Domains (3) summary
-
- cd07643
Location:7 → 237
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- PHA03247
Location:326 → 725
- PHA03247; large tegument protein UL36; Provisional
- cd22060
Location:724 → 754
- WH2_MTSS1; Wiskott Aldrich syndrome homology region 2 (WH2 motif) found in Metastasis suppressor protein 1 (MTSS-1)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000008.11 Reference GRCh38.p14 Primary Assembly
- Range
-
124550784..124728473 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047422493.1 → XP_047278449.1 protein MTSS 1 isoform X22
-
XM_047422490.1 → XP_047278446.1 protein MTSS 1 isoform X18
-
XM_017014086.3 → XP_016869575.1 protein MTSS 1 isoform X4
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (2) summary
-
- cd07643
Location:7 → 237
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- pfam03276
Location:697 → 825
- Gag_spuma; Spumavirus gag protein
-
XM_017014089.3 → XP_016869578.1 protein MTSS 1 isoform X8
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (2) summary
-
- cd07643
Location:7 → 237
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- pfam03276
Location:672 → 800
- Gag_spuma; Spumavirus gag protein
-
XM_017014092.3 → XP_016869581.1 protein MTSS 1 isoform X13
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (2) summary
-
- cd07643
Location:7 → 237
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- pfam03276
Location:633 → 761
- Gag_spuma; Spumavirus gag protein
-
XM_006716701.3 → XP_006716764.1 protein MTSS 1 isoform X3
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (2) summary
-
- cd07643
Location:7 → 237
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- pfam03276
Location:698 → 826
- Gag_spuma; Spumavirus gag protein
-
XM_017014088.3 → XP_016869577.1 protein MTSS 1 isoform X7
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (2) summary
-
- cd07643
Location:7 → 237
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- pfam03276
Location:673 → 801
- Gag_spuma; Spumavirus gag protein
-
XM_047422492.1 → XP_047278448.1 protein MTSS 1 isoform X20
-
XM_006716704.3 → XP_006716767.1 protein MTSS 1 isoform X16
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (2) summary
-
- cd07643
Location:7 → 241
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- PHA03247
Location:329 → 728
- PHA03247; large tegument protein UL36; Provisional
-
XM_006716700.3 → XP_006716763.1 protein MTSS 1 isoform X2
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (2) summary
-
- cd07643
Location:7 → 241
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- pfam03276
Location:701 → 829
- Gag_spuma; Spumavirus gag protein
-
XM_006716706.3 → XP_006716769.1 protein MTSS 1 isoform X21
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (2) summary
-
- cd07643
Location:7 → 241
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- PHA03247
Location:341 → 647
- PHA03247; large tegument protein UL36; Provisional
-
XM_006716703.3 → XP_006716766.1 protein MTSS 1 isoform X15
- Conserved Domains (3) summary
-
- cd07643
Location:7 → 241
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- PHA03247
Location:330 → 756
- PHA03247; large tegument protein UL36; Provisional
- pfam03276
Location:620 → 748
- Gag_spuma; Spumavirus gag protein
-
XM_005251113.3 → XP_005251170.1 protein MTSS 1 isoform X11
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (2) summary
-
- cd07643
Location:7 → 241
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- pfam03276
Location:637 → 765
- Gag_spuma; Spumavirus gag protein
-
XM_006716705.3 → XP_006716768.1 protein MTSS 1 isoform X17
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (3) summary
-
- cd07643
Location:7 → 241
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- PHA03247
Location:330 → 712
- PHA03247; large tegument protein UL36; Provisional
- cd22060
Location:711 → 741
- WH2_MTSS1; Wiskott Aldrich syndrome homology region 2 (WH2 motif) found in Metastasis suppressor protein 1 (MTSS-1)
-
XM_006716702.3 → XP_006716765.1 protein MTSS 1 isoform X5
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (2) summary
-
- cd07643
Location:7 → 241
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- pfam03276
Location:685 → 813
- Gag_spuma; Spumavirus gag protein
-
XM_005251111.3 → XP_005251168.1 protein MTSS 1 isoform X1
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (2) summary
-
- cd07643
Location:7 → 241
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- pfam03276
Location:702 → 830
- Gag_spuma; Spumavirus gag protein
-
XM_017014087.3 → XP_016869576.1 protein MTSS 1 isoform X6
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (2) summary
-
- cd07643
Location:7 → 241
- I-BAR_IMD_MIM; Inverse (I)-BAR, also known as the IRSp53/MIM homology Domain (IMD), of Missing In Metastasis
- pfam03276
Location:677 → 805
- Gag_spuma; Spumavirus gag protein
-
XM_011517403.2 → XP_011515705.1 protein MTSS 1 isoform X12
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (2) summary
-
- pfam03276
Location:635 → 763
- Gag_spuma; Spumavirus gag protein
- cl12013
Location:1 → 174
- BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
-
XM_017014091.2 → XP_016869580.1 protein MTSS 1 isoform X10
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (2) summary
-
- pfam03276
Location:639 → 767
- Gag_spuma; Spumavirus gag protein
- cl12013
Location:1 → 178
- BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
-
XM_047422491.1 → XP_047278447.1 protein MTSS 1 isoform X19
- Related
- ENSP00000428319.1, ENST00000524090.5
-
XM_017014090.3 → XP_016869579.1 protein MTSS 1 isoform X9
- UniProtKB/TrEMBL
-
A5YM41
- Conserved Domains (2) summary
-
- pfam03276
Location:647 → 775
- Gag_spuma; Spumavirus gag protein
- cl12013
Location:15 → 186
- BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
-
XM_047422488.1 → XP_047278444.1 protein MTSS 1 isoform X14
Reference GRCh38.p14 PATCHES
Genomic
-
NW_025791784.1 Reference GRCh38.p14 PATCHES
- Range
-
85734..103488 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060932.1 Alternate T2T-CHM13v2.0
- Range
-
125683798..125861532 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054361614.1 → XP_054217589.1 protein MTSS 1 isoform X22
-
XM_054361610.1 → XP_054217585.1 protein MTSS 1 isoform X18
-
XM_054361612.1 → XP_054217587.1 protein MTSS 1 isoform X20
-
XM_054361608.1 → XP_054217583.1 protein MTSS 1 isoform X16
-
XM_054361613.1 → XP_054217588.1 protein MTSS 1 isoform X21
-
XM_054361609.1 → XP_054217584.1 protein MTSS 1 isoform X17
-
XM_054361611.1 → XP_054217586.1 protein MTSS 1 isoform X19