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    GCK72_014517 hypothetical protein [ Caenorhabditis remanei ]

    Gene ID: 9829189, updated on 23-Nov-2023

    Summary

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    Gene symbol
    GCK72_014517
    Gene description
    hypothetical protein
    Locus tag
    GCK72_014517
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Caenorhabditis remanei (strain: PX506)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Old locus tag
    CRE_10117
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    Genomic context

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    See GCK72_014517 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    4
    Sequence:
    Chromosome: IV; NC_071331.1 (16229950..16231059, complement)

    Chromosome IV - NC_071331.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_071331.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables large ribosomal subunit rRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_071331.1 Reference assembly

      Range
      16229950..16231059 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003108337.2 → XP_003108385.1  hypothetical protein GCK72_014517 [Caenorhabditis remanei]

      See identical proteins and their annotated locations for XP_003108385.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      E3M6B2
      Conserved Domains (1) summary
      PLN03072
      Location:1 → 163
      PLN03072; 60S ribosomal protein L12; Provisional
    Nucleotide Protein
    Heading Accession and Version

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