Links from Gene
Items: 1 to 20 of 12623
1.
rs1491543850 has merged into rs146757703 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ACACACACACACACAC>-,AC,ACAC,ACACAC,ACACACAC,ACACACACAC,ACACACACACAC,ACACACACACACAC,ACACACACACACACACAC,ACACACACACACACACACAC,ACACACACACACACACACACAC,ACACACACACACACACACACACAC,ACACACACACACACACACACACACAC
[Show Flanks]
- Chromosome:
- 13:43855379
(GRCh38)
13:44429515
(GRCh37)
- Canonical SPDI:
- NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACACACACACACACACAC
- Gene:
- CCDC122 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
CACACACACACACACAC=0./0
(
ALFA)
-=0.1002/386
(ALSPAC)
CA=0.4952/2480
(1000Genomes)
- HGVS:
NC_000013.11:g.43855365AC[7], NC_000013.11:g.43855365AC[8], NC_000013.11:g.43855365AC[9], NC_000013.11:g.43855365AC[10], NC_000013.11:g.43855365AC[11], NC_000013.11:g.43855365AC[12], NC_000013.11:g.43855365AC[13], NC_000013.11:g.43855365AC[14], NC_000013.11:g.43855365AC[16], NC_000013.11:g.43855365AC[17], NC_000013.11:g.43855365AC[18], NC_000013.11:g.43855365AC[19], NC_000013.11:g.43855365AC[20], NC_000013.10:g.44429501AC[7], NC_000013.10:g.44429501AC[8], NC_000013.10:g.44429501AC[9], NC_000013.10:g.44429501AC[10], NC_000013.10:g.44429501AC[11], NC_000013.10:g.44429501AC[12], NC_000013.10:g.44429501AC[13], NC_000013.10:g.44429501AC[14], NC_000013.10:g.44429501AC[16], NC_000013.10:g.44429501AC[17], NC_000013.10:g.44429501AC[18], NC_000013.10:g.44429501AC[19], NC_000013.10:g.44429501AC[20]
2.
rs1491466003 has merged into rs55637761 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TGTGTGTGTGTGTG>-,TG,TGTG,TGTGTG,TGTGTGTG,TGTGTGTGTG,TGTGTGTGTGTG,TGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTG,TGTGTGTGTGTGTGTGTGTGTGTG
[Show Flanks]
- Chromosome:
- 13:43863690
(GRCh38)
13:44437826
(GRCh37)
- Canonical SPDI:
- NC_000013.11:43863675:TGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTG,NC_000013.11:43863675:TGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTG,NC_000013.11:43863675:TGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTG,NC_000013.11:43863675:TGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTG,NC_000013.11:43863675:TGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:43863675:TGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:43863675:TGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:43863675:TGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:43863675:TGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:43863675:TGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:43863675:TGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG,NC_000013.11:43863675:TGTGTGTGTGTGTGTGTGTGTGTGTGTG:TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
- Gene:
- CCDC122 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TGTGTGTGTGTGTGTG=0./0
(
ALFA)
TGTG=0.1466/734
(1000Genomes)
-=0.4829/1861
(ALSPAC)
- HGVS:
NC_000013.11:g.43863676TG[7], NC_000013.11:g.43863676TG[8], NC_000013.11:g.43863676TG[9], NC_000013.11:g.43863676TG[10], NC_000013.11:g.43863676TG[11], NC_000013.11:g.43863676TG[12], NC_000013.11:g.43863676TG[13], NC_000013.11:g.43863676TG[15], NC_000013.11:g.43863676TG[16], NC_000013.11:g.43863676TG[17], NC_000013.11:g.43863676TG[18], NC_000013.11:g.43863676TG[19], NC_000013.10:g.44437812TG[7], NC_000013.10:g.44437812TG[8], NC_000013.10:g.44437812TG[9], NC_000013.10:g.44437812TG[10], NC_000013.10:g.44437812TG[11], NC_000013.10:g.44437812TG[12], NC_000013.10:g.44437812TG[13], NC_000013.10:g.44437812TG[15], NC_000013.10:g.44437812TG[16], NC_000013.10:g.44437812TG[17], NC_000013.10:g.44437812TG[18], NC_000013.10:g.44437812TG[19]
3.
rs1491385502 has merged into rs1555391082 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CC>-,CCCC
[Show Flanks]
- Chromosome:
- 13:43855396
(GRCh38)
13:44429532
(GRCh37)
- Canonical SPDI:
- NC_000013.11:43855393:CCCC:CC,NC_000013.11:43855393:CCCC:CCCCCC
- Gene:
- CCDC122 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
CCCCCC=0./0
(
ALFA)
-=0.000031/4
(GnomAD)
-=0.000145/2
(TOMMO)
-=0.001638/3
(Korea1K)
- HGVS:
4.
rs1491352556 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- CC>-
[Show Flanks]
- Chromosome:
- 13:43855363
(GRCh38)
13:44429499
(GRCh37)
- Canonical SPDI:
- NC_000013.11:43855362:CC:
- Gene:
- CCDC122 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
-=0./0
(
ALFA)
-=0.00001/1
(GnomAD)
- HGVS:
5.
rs1491305735 has merged into rs11323501 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAA>-,A,AA,AAA,AAAAA,AAAAAA,AAAAAAAAA
[Show Flanks]
- Chromosome:
- 13:43832143
(GRCh38)
13:44406279
(GRCh37)
- Canonical SPDI:
- NC_000013.11:43832129:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000013.11:43832129:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000013.11:43832129:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000013.11:43832129:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000013.11:43832129:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000013.11:43832129:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000013.11:43832129:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA
- Gene:
- CCDC122 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAAAAAA=0./0
(
ALFA)
-=0.0727/280
(ALSPAC)
A=0.2/8
(GENOME_DK)
A=0.2901/1453
(1000Genomes)
- HGVS:
NC_000013.11:g.43832143_43832146del, NC_000013.11:g.43832144_43832146del, NC_000013.11:g.43832145_43832146del, NC_000013.11:g.43832146del, NC_000013.11:g.43832146dup, NC_000013.11:g.43832145_43832146dup, NC_000013.11:g.43832142_43832146dup, NC_000013.10:g.44406279_44406282del, NC_000013.10:g.44406280_44406282del, NC_000013.10:g.44406281_44406282del, NC_000013.10:g.44406282del, NC_000013.10:g.44406282dup, NC_000013.10:g.44406281_44406282dup, NC_000013.10:g.44406278_44406282dup
7.
rs1491185670 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TA>-
[Show Flanks]
- Chromosome:
- 13:43855682
(GRCh38)
13:44429818
(GRCh37)
- Canonical SPDI:
- NC_000013.11:43855680:ATA:A
- Gene:
- CCDC122 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.001602/19
(
ALFA)
-=0.000216/3
(TOMMO)
-=0.002305/610
(TOPMED)
-=0.002433/291
(GnomAD)
- HGVS:
8.
rs1491126133 has merged into rs146757703 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ACACACACACACACAC>-,AC,ACAC,ACACAC,ACACACAC,ACACACACAC,ACACACACACAC,ACACACACACACAC,ACACACACACACACACAC,ACACACACACACACACACAC,ACACACACACACACACACACAC,ACACACACACACACACACACACAC,ACACACACACACACACACACACACAC
[Show Flanks]
- Chromosome:
- 13:43855379
(GRCh38)
13:44429515
(GRCh37)
- Canonical SPDI:
- NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACACACACACACACAC,NC_000013.11:43855363:CACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACACACACACACACACAC
- Gene:
- CCDC122 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
CACACACACACACACAC=0./0
(
ALFA)
-=0.1002/386
(ALSPAC)
CA=0.4952/2480
(1000Genomes)
- HGVS:
NC_000013.11:g.43855365AC[7], NC_000013.11:g.43855365AC[8], NC_000013.11:g.43855365AC[9], NC_000013.11:g.43855365AC[10], NC_000013.11:g.43855365AC[11], NC_000013.11:g.43855365AC[12], NC_000013.11:g.43855365AC[13], NC_000013.11:g.43855365AC[14], NC_000013.11:g.43855365AC[16], NC_000013.11:g.43855365AC[17], NC_000013.11:g.43855365AC[18], NC_000013.11:g.43855365AC[19], NC_000013.11:g.43855365AC[20], NC_000013.10:g.44429501AC[7], NC_000013.10:g.44429501AC[8], NC_000013.10:g.44429501AC[9], NC_000013.10:g.44429501AC[10], NC_000013.10:g.44429501AC[11], NC_000013.10:g.44429501AC[12], NC_000013.10:g.44429501AC[13], NC_000013.10:g.44429501AC[14], NC_000013.10:g.44429501AC[16], NC_000013.10:g.44429501AC[17], NC_000013.10:g.44429501AC[18], NC_000013.10:g.44429501AC[19], NC_000013.10:g.44429501AC[20]
9.
rs1491002643 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C,G
[Show Flanks]
- Chromosome:
- 13:43837579
(GRCh38)
13:44411715
(GRCh37)
- Canonical SPDI:
- NC_000013.11:43837578:A:C,NC_000013.11:43837578:A:G
- Gene:
- CCDC122 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
- HGVS:
10.
rs1490977023 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 13:43879825
(GRCh38)
13:44453961
(GRCh37)
- Canonical SPDI:
- NC_000013.11:43879824:G:A
- Gene:
- LACC1 (Varview), CCDC122 (Varview)
- Functional Consequence:
- intron_variant,2KB_upstream_variant,upstream_transcript_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0.00008/1
(
ALFA)
A=0.00002/1
(GnomAD)
- HGVS:
11.
rs1490906409 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G
[Show Flanks]
- Chromosome:
- 13:43879510
(GRCh38)
13:44453646
(GRCh37)
- Canonical SPDI:
- NC_000013.11:43879509:C:G
- Gene:
- LACC1 (Varview), CCDC122 (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,upstream_transcript_variant,5_prime_UTR_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
G=0.000007/1
(GnomAD)
- HGVS:
NC_000013.11:g.43879510C>G, NC_000013.10:g.44453646C>G, NG_053160.1:g.5677C>G, NM_001128303.2:c.-259C>G, NM_001128303.1:c.-259C>G, XM_017020397.3:c.-292G>C, XM_017020397.2:c.-292G>C, XM_017020397.1:c.-292G>C, XM_024449319.2:c.-259C>G, NM_001350617.2:c.-386G>C, NM_001350617.1:c.-386G>C, XM_017020398.2:c.-292G>C, XM_017020398.1:c.-292G>C, NM_001350641.1:c.-472C>G, NM_001350638.1:c.-463C>G, XM_047430102.1:c.-463C>G, NM_001350640.1:c.-268C>G, NM_001350645.1:c.-981C>G, XM_047430104.1:c.-259C>G, NM_001350644.1:c.-777C>G, XM_047430106.1:c.-463C>G, XM_047430114.1:c.-292G>C
12.
rs1490882757 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>T
[Show Flanks]
- Chromosome:
- 13:43863101
(GRCh38)
13:44437237
(GRCh37)
- Canonical SPDI:
- NC_000013.11:43863100:A:T
- Gene:
- CCDC122 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000011/3
(TOPMED)
T=0.000014/2
(GnomAD)
- HGVS:
13.
rs1490857194 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A
[Show Flanks]
- Chromosome:
- 13:43846165
(GRCh38)
13:44420301
(GRCh37)
- Canonical SPDI:
- NC_000013.11:43846164:C:A
- Gene:
- CCDC122 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000007/1
(GnomAD)
- HGVS:
14.
rs1490828439 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- C>-
[Show Flanks]
- Chromosome:
- 13:43830207
(GRCh38)
13:44404343
(GRCh37)
- Canonical SPDI:
- NC_000013.11:43830206:C:
- Gene:
- CCDC122 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
-=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
- HGVS:
15.
rs1490796274 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TAT>-
[Show Flanks]
- Chromosome:
- 13:43855747
(GRCh38)
13:44429883
(GRCh37)
- Canonical SPDI:
- NC_000013.11:43855742:TTATTAT:TTAT
- Gene:
- CCDC122 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTAT=0.000142/2
(
ALFA)
-=0.00005/7
(GnomAD)
-=0.00006/16
(TOPMED)
- HGVS:
16.
rs1490761326 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C
[Show Flanks]
- Chromosome:
- 13:43853328
(GRCh38)
13:44427464
(GRCh37)
- Canonical SPDI:
- NC_000013.11:43853327:A:C
- Gene:
- CCDC122 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000007/1
(GnomAD)
- HGVS:
17.
rs1490684171 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ACTT>-
[Show Flanks]
- Chromosome:
- 13:43871392
(GRCh38)
13:44445528
(GRCh37)
- Canonical SPDI:
- NC_000013.11:43871387:ACTTACTT:ACTT
- Gene:
- CCDC122 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
ACTTACTT=0./0
(
ALFA)
-=0.000008/2
(TOPMED)
- HGVS:
19.
rs1490541448 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>G
[Show Flanks]
- Chromosome:
- 13:43873410
(GRCh38)
13:44447546
(GRCh37)
- Canonical SPDI:
- NC_000013.11:43873409:C:G
- Gene:
- CCDC122 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000007/1
(GnomAD)
- HGVS:
20.
rs1490527026 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A
[Show Flanks]
- Chromosome:
- 13:43872065
(GRCh38)
13:44446201
(GRCh37)
- Canonical SPDI:
- NC_000013.11:43872064:C:A
- Gene:
- CCDC122 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
A=0.000008/2
(TOPMED)
- HGVS: