SNP Links for Gene (Select 283171) - SNP

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Items: 1 to 20 of 10108

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Select item 14909912701.

rs1490991270 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:130680897 (GRCh38)
11:130550792 (GRCh37)
Canonical SPDI:: NC_000011.10:130680896:G:C
Gene:: LINC02873 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.130680897G>C, NC_000011.9:g.130550792G>C

Select item 14909379212.

rs1490937921 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:130696817 (GRCh38)
11:130566712 (GRCh37)
Canonical SPDI:: NC_000011.10:130696816:C:T
Gene:: LINC02873 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000026/7 (TOPMED)
HGVS:: NC_000011.10:g.130696817C>T, NC_000011.9:g.130566712C>T

Select item 14908271953.

rs1490827195 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 11:130689642 (GRCh38)
11:130559538 (GRCh37)
Canonical SPDI:: NC_000011.10:130689642:AAAAAA:AAAAAAA
Gene:: LINC02873 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAA=0./0 (ALFA)
A=0.000042/11 (TOPMED)
A=0.000086/12 (GnomAD)
HGVS:: NC_000011.10:g.130689648dup, NC_000011.9:g.130559543dup

Select item 14907779494.

rs1490777949 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 11:130687173 (GRCh38)
11:130557068 (GRCh37)
Canonical SPDI:: NC_000011.10:130687172:G:A,NC_000011.10:130687172:G:T
Gene:: LINC02873 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0.000169/2 (ALFA)
A=0.000067/8 (GnomAD)
HGVS:: NC_000011.10:g.130687173G>A, NC_000011.10:g.130687173G>T, NC_000011.9:g.130557068G>A, NC_000011.9:g.130557068G>T

Select item 14907150315.

rs1490715031 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:130712097 (GRCh38)
11:130581992 (GRCh37)
Canonical SPDI:: NC_000011.10:130712096:C:T
Gene:: LINC02873 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.130712097C>T, NC_000011.9:g.130581992C>T

Select item 14906197166.

rs1490619716 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:130672756 (GRCh38)
11:130542651 (GRCh37)
Canonical SPDI:: NC_000011.10:130672755:G:A
Gene:: LINC02873 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000015/4 (TOPMED)
HGVS:: NC_000011.10:g.130672756G>A, NC_000011.9:g.130542651G>A

Select item 14905154437.

rs1490515443 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:130673177 (GRCh38)
11:130543072 (GRCh37)
Canonical SPDI:: NC_000011.10:130673176:C:T
Gene:: LINC02873 (Varview)
Functional Consequence:: non_coding_transcript_variant
HGVS:: NC_000011.10:g.130673177C>T, NC_000011.9:g.130543072C>T, NR_164144.1:n.222C>T, NM_173580.1:c.199C>T, NM_001271983.1:c.199C>T

Select item 14905153518.

rs1490515351 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 11:130712732 (GRCh38)
11:130582627 (GRCh37)
Canonical SPDI:: NC_000011.10:130712731:C:A
Gene:: LINC02873 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.130712732C>A, NC_000011.9:g.130582627C>A

Select item 14904111229.

rs1490411122 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:130705534 (GRCh38)
11:130575429 (GRCh37)
Canonical SPDI:: NC_000011.10:130705533:T:C
Gene:: LINC02873 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.130705534T>C, NC_000011.9:g.130575429T>C

Select item 149035709410.

rs1490357094 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 11:130689679 (GRCh38)
11:130559574 (GRCh37)
Canonical SPDI:: NC_000011.10:130689678:C:A
Gene:: LINC02873 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.130689679C>A, NC_000011.9:g.130559574C>A

Select item 149026803611.

rs1490268036 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G [Show Flanks]
Chromosome:: 11:130673320 (GRCh38)
11:130543216 (GRCh37)
Canonical SPDI:: NC_000011.10:130673320:GGGGG:GGGGGG
Gene:: LINC02873 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GGGGGG=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000018/1 (GnomAD)
HGVS:: NC_000011.10:g.130673325dup, NC_000011.9:g.130543220dup

Select item 149024685112.

rs1490246851 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:130706445 (GRCh38)
11:130576340 (GRCh37)
Canonical SPDI:: NC_000011.10:130706444:G:A
Gene:: LINC02873 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.130706445G>A, NC_000011.9:g.130576340G>A

Select item 149021937813.

rs1490219378 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 11:130673444 (GRCh38)
11:130543339 (GRCh37)
Canonical SPDI:: NC_000011.10:130673443:G:T
Gene:: LINC02873 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.130673444G>T, NC_000011.9:g.130543339G>T

Select item 149019419314.

rs1490194193 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:130689182 (GRCh38)
11:130559077 (GRCh37)
Canonical SPDI:: NC_000011.10:130689181:C:T
Gene:: LINC02873 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.130689182C>T, NC_000011.9:g.130559077C>T

Select item 149017185515.

rs1490171855 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 11:130680436 (GRCh38)
11:130550331 (GRCh37)
Canonical SPDI:: NC_000011.10:130680435:G:A,NC_000011.10:130680435:G:T
Gene:: LINC02873 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.130680436G>A, NC_000011.10:g.130680436G>T, NC_000011.9:g.130550331G>A, NC_000011.9:g.130550331G>T

Select item 148967657616.

rs1489676576 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:130711203 (GRCh38)
11:130581098 (GRCh37)
Canonical SPDI:: NC_000011.10:130711202:T:C
Gene:: LINC02873 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000026/7 (TOPMED)
HGVS:: NC_000011.10:g.130711203T>C, NC_000011.9:g.130581098T>C

Select item 148960291017.

rs1489602910 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:130714239 (GRCh38)
11:130584134 (GRCh37)
Canonical SPDI:: NC_000011.10:130714238:A:G
Gene:: LINC02873 (Varview)
Functional Consequence:: non_coding_transcript_variant
HGVS:: NC_000011.10:g.130714239A>G, NC_000011.9:g.130584134A>G, NR_164144.1:n.434A>G, NM_173580.1:c.*42A>G, NM_001271983.1:c.*42A>G

Select item 148958620318.

rs1489586203 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:130707077 (GRCh38)
11:130576972 (GRCh37)
Canonical SPDI:: NC_000011.10:130707076:C:T
Gene:: LINC02873 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.130707077C>T, NC_000011.9:g.130576972C>T

Select item 148957880319.

rs1489578803 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:130678973 (GRCh38)
11:130548868 (GRCh37)
Canonical SPDI:: NC_000011.10:130678972:C:T
Gene:: LINC02873 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.130678973C>T, NC_000011.9:g.130548868C>T

Select item 148955630920.

rs1489556309 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:130692138 (GRCh38)
11:130562033 (GRCh37)
Canonical SPDI:: NC_000011.10:130692137:A:G
Gene:: LINC02873 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.130692138A>G, NC_000011.9:g.130562033A>G

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