SNP Links for Gene (Select 55802) - SNP

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Select item 14915652601.

rs1491565260 [Homo sapiens]

Variant type:: DEL
Alleles:: CT>- [Show Flanks]
Chromosome:: 3:53316596 (GRCh38)
3:53350624 (GRCh37)
Canonical SPDI:: NC_000003.12:53316595:CT:
Gene:: DCP1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000087/9 (GnomAD)
HGVS:: NC_000003.12:g.53316596_53316597del, NW_004775426.1:g.165551_165552del, NC_000003.11:g.53350624_53350625del

Select item 14915114642.

rs1491511464 has merged into rs71087077 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTT>-,T,TT,TTT,TTTTT,TTTTTT,TTTTTTTTT [Show Flanks]
Chromosome:: 3:53330836 (GRCh38)
3:53364863 (GRCh37)
Canonical SPDI:: NC_000003.12:53330825:TTTTTTTTTTTTTT:TTTTTTTTTT,NC_000003.12:53330825:TTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000003.12:53330825:TTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000003.12:53330825:TTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000003.12:53330825:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000003.12:53330825:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000003.12:53330825:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT
Gene:: DCP1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTT=0./0 (ALFA)
-=0.28763/172 (NorthernSweden)
-=0.325/13 (GENOME_DK)
-=0.37081/1857 (1000Genomes)
HGVS:: NC_000003.12:g.53330836_53330839del, NC_000003.12:g.53330837_53330839del, NC_000003.12:g.53330838_53330839del, NC_000003.12:g.53330839del, NC_000003.12:g.53330839dup, NC_000003.12:g.53330838_53330839dup, NC_000003.12:g.53330835_53330839dup, NC_000003.11:g.53364863_53364866del, NC_000003.11:g.53364864_53364866del, NC_000003.11:g.53364865_53364866del, NC_000003.11:g.53364866del, NC_000003.11:g.53364866dup, NC_000003.11:g.53364865_53364866dup, NC_000003.11:g.53364862_53364866dup, NW_004775426.1:g.179791_179794del, NW_004775426.1:g.179792_179794del, NW_004775426.1:g.179793_179794del, NW_004775426.1:g.179794del, NW_004775426.1:g.179794dup, NW_004775426.1:g.179793_179794dup, NW_004775426.1:g.179790_179794dup

Select item 14914876443.

rs1491487644 has merged into rs200145954 [Homo sapiens]

Variant type:: DELINS
Alleles:: AT>-,ATAT,ATATAT [Show Flanks]
Chromosome:: 3:53322481 (GRCh38)
3:53356508 (GRCh37)
Canonical SPDI:: NC_000003.12:53322467:TATATATATATATAT:TATATATATATAT,NC_000003.12:53322467:TATATATATATATAT:TATATATATATATATAT,NC_000003.12:53322467:TATATATATATATAT:TATATATATATATATATAT
Gene:: DCP1A (Varview), LOC124909380 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TATATATATATATATAT=0./0 (ALFA)
TA=0.02509/421 (TOMMO)
TA=0.05072/254 (1000Genomes)
TA=0.05416/99 (Korea1K)
HGVS:: NC_000003.12:g.53322469AT[6], NC_000003.12:g.53322469AT[8], NC_000003.12:g.53322469AT[9], NC_000003.11:g.53356496AT[6], NC_000003.11:g.53356496AT[8], NC_000003.11:g.53356496AT[9], NW_004775426.1:g.171424AT[6], NW_004775426.1:g.171424AT[8], NW_004775426.1:g.171424AT[9]

Select item 14914856084.

rs1491485608 [Homo sapiens]

Variant type:: INS
Alleles:: ->G [Show Flanks]
Chromosome:: 3:53315758 (GRCh38)
3:53349788 (GRCh37)
Canonical SPDI:: NC_000003.12:53315758::G
Gene:: DCP1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.00004/1 (TOMMO)
HGVS:: NC_000003.12:g.53315758_53315759insG, NW_004775426.1:g.164713_164714insG, NC_000003.11:g.53349787_53349788insG

Select item 14914732515.

rs1491473251 has merged into rs369209976 [Homo sapiens]

Variant type:: DELINS
Alleles:: CCC>-,C,CC,CCCC,CCCCC,CCCCCC,CCCCCCC [Show Flanks]
Chromosome:: 3:53326986 (GRCh38)
3:53361013 (GRCh37)
Canonical SPDI:: NC_000003.12:53326976:CCCCCCCCCCCC:CCCCCCCCC,NC_000003.12:53326976:CCCCCCCCCCCC:CCCCCCCCCC,NC_000003.12:53326976:CCCCCCCCCCCC:CCCCCCCCCCC,NC_000003.12:53326976:CCCCCCCCCCCC:CCCCCCCCCCCCC,NC_000003.12:53326976:CCCCCCCCCCCC:CCCCCCCCCCCCCC,NC_000003.12:53326976:CCCCCCCCCCCC:CCCCCCCCCCCCCCC,NC_000003.12:53326976:CCCCCCCCCCCC:CCCCCCCCCCCCCCCC
Gene:: DCP1A (Varview), LOC124909380 (Varview)
Functional Consequence:: intron_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CCCCCCCCCC=0./0 (ALFA)
-=0.185/111 (NorthernSweden)
-=0.225/9 (GENOME_DK)
HGVS:: NC_000003.12:g.53326986_53326988del, NC_000003.12:g.53326987_53326988del, NC_000003.12:g.53326988del, NC_000003.12:g.53326988dup, NC_000003.12:g.53326987_53326988dup, NC_000003.12:g.53326986_53326988dup, NC_000003.12:g.53326985_53326988dup, NC_000003.11:g.53361013_53361015del, NC_000003.11:g.53361014_53361015del, NC_000003.11:g.53361015del, NC_000003.11:g.53361015dup, NC_000003.11:g.53361014_53361015dup, NC_000003.11:g.53361013_53361015dup, NC_000003.11:g.53361012_53361015dup, NW_004775426.1:g.175941_175943del, NW_004775426.1:g.175942_175943del, NW_004775426.1:g.175943del, NW_004775426.1:g.175943dup, NW_004775426.1:g.175942_175943dup, NW_004775426.1:g.175941_175943dup, NW_004775426.1:g.175940_175943dup

Select item 14914383876.

rs1491438387 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CA [Show Flanks]
Chromosome:: 3:53322468 (GRCh38)
3:53356496 (GRCh37)
Canonical SPDI:: NC_000003.12:53322468:A:ACA
Gene:: DCP1A (Varview), LOC124909380 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ACA=0./0 (ALFA)
AC=0.000007/1 (GnomAD)
AC=0.000011/3 (TOPMED)
HGVS:: NC_000003.12:g.53322469_53322470insCA, NC_000003.11:g.53356496_53356497insCA, NW_004775426.1:g.171424_171425insCA

Select item 14914080207.

rs1491408020 has merged into rs369209976 [Homo sapiens]

Variant type:: DELINS
Alleles:: CCC>-,C,CC,CCCC,CCCCC,CCCCCC,CCCCCCC [Show Flanks]
Chromosome:: 3:53326986 (GRCh38)
3:53361013 (GRCh37)
Canonical SPDI:: NC_000003.12:53326976:CCCCCCCCCCCC:CCCCCCCCC,NC_000003.12:53326976:CCCCCCCCCCCC:CCCCCCCCCC,NC_000003.12:53326976:CCCCCCCCCCCC:CCCCCCCCCCC,NC_000003.12:53326976:CCCCCCCCCCCC:CCCCCCCCCCCCC,NC_000003.12:53326976:CCCCCCCCCCCC:CCCCCCCCCCCCCC,NC_000003.12:53326976:CCCCCCCCCCCC:CCCCCCCCCCCCCCC,NC_000003.12:53326976:CCCCCCCCCCCC:CCCCCCCCCCCCCCCC
Gene:: DCP1A (Varview), LOC124909380 (Varview)
Functional Consequence:: intron_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CCCCCCCCCC=0./0 (ALFA)
-=0.185/111 (NorthernSweden)
-=0.225/9 (GENOME_DK)
HGVS:: NC_000003.12:g.53326986_53326988del, NC_000003.12:g.53326987_53326988del, NC_000003.12:g.53326988del, NC_000003.12:g.53326988dup, NC_000003.12:g.53326987_53326988dup, NC_000003.12:g.53326986_53326988dup, NC_000003.12:g.53326985_53326988dup, NC_000003.11:g.53361013_53361015del, NC_000003.11:g.53361014_53361015del, NC_000003.11:g.53361015del, NC_000003.11:g.53361015dup, NC_000003.11:g.53361014_53361015dup, NC_000003.11:g.53361013_53361015dup, NC_000003.11:g.53361012_53361015dup, NW_004775426.1:g.175941_175943del, NW_004775426.1:g.175942_175943del, NW_004775426.1:g.175943del, NW_004775426.1:g.175943dup, NW_004775426.1:g.175942_175943dup, NW_004775426.1:g.175941_175943dup, NW_004775426.1:g.175940_175943dup

Select item 14913889328.

rs1491388932 has merged into rs1359300693 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTT>-,TT,TTT,TTTTT,TTTTTT,TTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 3:53315768 (GRCh38)
3:53349797 (GRCh37)
Canonical SPDI:: NC_000003.12:53315757:TTTTTTTTTTTTTT:TTTTTTTTTT,NC_000003.12:53315757:TTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000003.12:53315757:TTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000003.12:53315757:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000003.12:53315757:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000003.12:53315757:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000003.12:53315757:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:53315757:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:53315757:TTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: DCP1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTT=0./0 (ALFA)
T=0.00223/35 (TOMMO)
-=0.45801/829 (Korea1K)
HGVS:: NC_000003.12:g.53315768_53315771del, NC_000003.12:g.53315770_53315771del, NC_000003.12:g.53315771del, NC_000003.12:g.53315771dup, NC_000003.12:g.53315770_53315771dup, NC_000003.12:g.53315768_53315771dup, NC_000003.12:g.53315761_53315771dup, NC_000003.12:g.53315758_53315771dup, NC_000003.12:g.53315771_53315772insTTTTTTTTTTTTTTT, NW_004775426.1:g.164723_164726del, NW_004775426.1:g.164725_164726del, NW_004775426.1:g.164726del, NW_004775426.1:g.164726dup, NW_004775426.1:g.164725_164726dup, NW_004775426.1:g.164723_164726dup, NW_004775426.1:g.164716_164726dup, NW_004775426.1:g.164713_164726dup, NW_004775426.1:g.164726_164727insTTTTTTTTTTTTTTT, NC_000003.11:g.53349799dup, NC_000003.11:g.53349797_53349799del, NC_000003.11:g.53349799del, NC_000003.11:g.53349798_53349799dup, NC_000003.11:g.53349797_53349799dup, NC_000003.11:g.53349795_53349799dup, NC_000003.11:g.53349788_53349799dup, NC_000003.11:g.53349799_53349800insTTTTTTTTTTTTTTT, NC_000003.11:g.53349799_53349800insTTTTTTTTTTTTTTTT

Select item 14913524929.

rs1491352492 [Homo sapiens]

Variant type:: DEL
Alleles:: AG>- [Show Flanks]
Chromosome:: 3:53344150 (GRCh38)
3:53378177 (GRCh37)
Canonical SPDI:: NC_000003.12:53344149:AG:
Gene:: DCP1A (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000003.12:g.53344150_53344151del, NC_000003.11:g.53378177_53378178del, NW_004775426.1:g.193105_193106del

Select item 149130673210.

rs1491306732 [Homo sapiens]

Variant type:: DEL
Alleles:: AC>- [Show Flanks]
Chromosome:: 3:53326976 (GRCh38)
3:53361003 (GRCh37)
Canonical SPDI:: NC_000003.12:53326975:AC:
Gene:: DCP1A (Varview), LOC124909380 (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: -=0.00017/2 (ALFA)
HGVS:: NC_000003.12:g.53326976_53326977del, NC_000003.11:g.53361003_53361004del, NW_004775426.1:g.175931_175932del

Select item 149128376711.

rs1491283767 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CTT [Show Flanks]
Chromosome:: 3:53314668 (GRCh38)
3:53348699 (GRCh37)
Canonical SPDI:: NC_000003.12:53314668:TT:TTCTT
Gene:: DCP1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TTCTT=0./0 (ALFA)
HGVS:: NC_000003.12:g.53314670_53314671insCTT, NW_004775426.1:g.163625_163626insCTT, NC_000003.11:g.53348700_53348701insCTT

Select item 149122487812.

rs1491224878 has merged into rs1211486616 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAAAA>-,AA,AAA,AAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 3:53315543 (GRCh38)
3:53349572 (GRCh37)
Canonical SPDI:: NC_000003.12:53315534:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAA,NC_000003.12:53315534:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000003.12:53315534:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000003.12:53315534:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000003.12:53315534:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000003.12:53315534:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000003.12:53315534:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000003.12:53315534:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000003.12:53315534:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000003.12:53315534:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000003.12:53315534:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000003.12:53315534:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000003.12:53315534:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:53315534:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:53315534:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:53315534:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:53315534:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:53315534:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:53315534:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:53315534:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:53315534:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: DCP1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAA=0./0 (ALFA)
HGVS:: NC_000003.12:g.53315543_53315557del, NC_000003.12:g.53315545_53315557del, NC_000003.12:g.53315546_53315557del, NC_000003.12:g.53315547_53315557del, NC_000003.12:g.53315549_53315557del, NC_000003.12:g.53315550_53315557del, NC_000003.12:g.53315551_53315557del, NC_000003.12:g.53315552_53315557del, NC_000003.12:g.53315553_53315557del, NC_000003.12:g.53315554_53315557del, NC_000003.12:g.53315555_53315557del, NC_000003.12:g.53315556_53315557del, NC_000003.12:g.53315557del, NC_000003.12:g.53315557dup, NC_000003.12:g.53315556_53315557dup, NC_000003.12:g.53315555_53315557dup, NC_000003.12:g.53315554_53315557dup, NC_000003.12:g.53315553_53315557dup, NC_000003.12:g.53315552_53315557dup, NC_000003.12:g.53315551_53315557dup, NC_000003.12:g.53315549_53315557dup, NW_004775426.1:g.164498_164512del, NW_004775426.1:g.164500_164512del, NW_004775426.1:g.164501_164512del, NW_004775426.1:g.164502_164512del, NW_004775426.1:g.164504_164512del, NW_004775426.1:g.164505_164512del, NW_004775426.1:g.164506_164512del, NW_004775426.1:g.164507_164512del, NW_004775426.1:g.164508_164512del, NW_004775426.1:g.164509_164512del, NW_004775426.1:g.164510_164512del, NW_004775426.1:g.164511_164512del, NW_004775426.1:g.164512del, NW_004775426.1:g.164512dup, NW_004775426.1:g.164511_164512dup, NW_004775426.1:g.164510_164512dup, NW_004775426.1:g.164509_164512dup, NW_004775426.1:g.164508_164512dup, NW_004775426.1:g.164507_164512dup, NW_004775426.1:g.164506_164512dup, NW_004775426.1:g.164504_164512dup, NC_000003.11:g.53349572_53349586del, NC_000003.11:g.53349574_53349586del, NC_000003.11:g.53349575_53349586del, NC_000003.11:g.53349576_53349586del, NC_000003.11:g.53349578_53349586del, NC_000003.11:g.53349579_53349586del, NC_000003.11:g.53349580_53349586del, NC_000003.11:g.53349581_53349586del, NC_000003.11:g.53349582_53349586del, NC_000003.11:g.53349583_53349586del, NC_000003.11:g.53349584_53349586del, NC_000003.11:g.53349585_53349586del, NC_000003.11:g.53349586del, NC_000003.11:g.53349586dup, NC_000003.11:g.53349585_53349586dup, NC_000003.11:g.53349584_53349586dup, NC_000003.11:g.53349583_53349586dup, NC_000003.11:g.53349582_53349586dup, NC_000003.11:g.53349581_53349586dup, NC_000003.11:g.53349580_53349586dup, NC_000003.11:g.53349578_53349586dup

Select item 149114148613.

rs1491141486 has merged into rs1167830951 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTTTTTTTTT>-,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 3:53314673 (GRCh38)
3:53348703 (GRCh37)
Canonical SPDI:: NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:53314667:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: DCP1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTT=0./0 (ALFA)
-=0.000079/21 (TOPMED)
HGVS:: NC_000003.12:g.53314673_53314689del, NC_000003.12:g.53314675_53314689del, NC_000003.12:g.53314676_53314689del, NC_000003.12:g.53314677_53314689del, NC_000003.12:g.53314678_53314689del, NC_000003.12:g.53314679_53314689del, NC_000003.12:g.53314680_53314689del, NC_000003.12:g.53314681_53314689del, NC_000003.12:g.53314682_53314689del, NC_000003.12:g.53314683_53314689del, NC_000003.12:g.53314684_53314689del, NC_000003.12:g.53314685_53314689del, NC_000003.12:g.53314686_53314689del, NC_000003.12:g.53314687_53314689del, NC_000003.12:g.53314688_53314689del, NC_000003.12:g.53314689del, NC_000003.12:g.53314689dup, NC_000003.12:g.53314688_53314689dup, NC_000003.12:g.53314687_53314689dup, NC_000003.12:g.53314686_53314689dup, NC_000003.12:g.53314685_53314689dup, NC_000003.12:g.53314684_53314689dup, NC_000003.12:g.53314683_53314689dup, NC_000003.12:g.53314682_53314689dup, NC_000003.12:g.53314681_53314689dup, NC_000003.12:g.53314680_53314689dup, NC_000003.12:g.53314679_53314689dup, NC_000003.12:g.53314678_53314689dup, NC_000003.12:g.53314677_53314689dup, NC_000003.12:g.53314676_53314689dup, NC_000003.12:g.53314675_53314689dup, NC_000003.12:g.53314674_53314689dup, NC_000003.12:g.53314673_53314689dup, NC_000003.12:g.53314671_53314689dup, NC_000003.12:g.53314689_53314690insTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000003.12:g.53314689_53314690insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NW_004775426.1:g.163628_163644del, NW_004775426.1:g.163630_163644del, NW_004775426.1:g.163631_163644del, NW_004775426.1:g.163632_163644del, NW_004775426.1:g.163633_163644del, NW_004775426.1:g.163634_163644del, NW_004775426.1:g.163635_163644del, NW_004775426.1:g.163636_163644del, NW_004775426.1:g.163637_163644del, NW_004775426.1:g.163638_163644del, NW_004775426.1:g.163639_163644del, NW_004775426.1:g.163640_163644del, NW_004775426.1:g.163641_163644del, NW_004775426.1:g.163642_163644del, NW_004775426.1:g.163643_163644del, NW_004775426.1:g.163644del, NW_004775426.1:g.163644dup, NW_004775426.1:g.163643_163644dup, NW_004775426.1:g.163642_163644dup, NW_004775426.1:g.163641_163644dup, NW_004775426.1:g.163640_163644dup, NW_004775426.1:g.163639_163644dup, NW_004775426.1:g.163638_163644dup, NW_004775426.1:g.163637_163644dup, NW_004775426.1:g.163636_163644dup, NW_004775426.1:g.163635_163644dup, NW_004775426.1:g.163634_163644dup, NW_004775426.1:g.163633_163644dup, NW_004775426.1:g.163632_163644dup, NW_004775426.1:g.163631_163644dup, NW_004775426.1:g.163630_163644dup, NW_004775426.1:g.163629_163644dup, NW_004775426.1:g.163628_163644dup, NW_004775426.1:g.163626_163644dup, NW_004775426.1:g.163644_163645insTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NW_004775426.1:g.163644_163645insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000003.11:g.53348718dup, NC_000003.11:g.53348703_53348718del, NC_000003.11:g.53348705_53348718del, NC_000003.11:g.53348706_53348718del, NC_000003.11:g.53348707_53348718del, NC_000003.11:g.53348708_53348718del, NC_000003.11:g.53348709_53348718del, NC_000003.11:g.53348710_53348718del, NC_000003.11:g.53348711_53348718del, NC_000003.11:g.53348712_53348718del, NC_000003.11:g.53348713_53348718del, NC_000003.11:g.53348714_53348718del, NC_000003.11:g.53348715_53348718del, NC_000003.11:g.53348716_53348718del, NC_000003.11:g.53348717_53348718del, NC_000003.11:g.53348718del, NC_000003.11:g.53348717_53348718dup, NC_000003.11:g.53348716_53348718dup, NC_000003.11:g.53348715_53348718dup, NC_000003.11:g.53348714_53348718dup, NC_000003.11:g.53348713_53348718dup, NC_000003.11:g.53348712_53348718dup, NC_000003.11:g.53348711_53348718dup, NC_000003.11:g.53348710_53348718dup, NC_000003.11:g.53348709_53348718dup, NC_000003.11:g.53348708_53348718dup, NC_000003.11:g.53348707_53348718dup, NC_000003.11:g.53348706_53348718dup, NC_000003.11:g.53348705_53348718dup, NC_000003.11:g.53348704_53348718dup, NC_000003.11:g.53348703_53348718dup, NC_000003.11:g.53348702_53348718dup, NC_000003.11:g.53348701_53348718dup, NC_000003.11:g.53348699_53348718dup, NC_000003.11:g.53348718_53348719insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000003.11:g.53348718_53348719insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

Select item 149113875514.

rs1491138755 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AC [Show Flanks]
Chromosome:: 3:53326977 (GRCh38)
3:53361005 (GRCh37)
Canonical SPDI:: NC_000003.12:53326977:C:CAC
Gene:: DCP1A (Varview), LOC124909380 (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CAC=0./0 (ALFA)
CA=0.00008/7 (GnomAD)
HGVS:: NC_000003.12:g.53326978_53326979insAC, NC_000003.11:g.53361005_53361006insAC, NW_004775426.1:g.175933_175934insAC

Select item 149112769315.

rs1491127693 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 3:53315534 (GRCh38)
3:53349563 (GRCh37)
Canonical SPDI:: NC_000003.12:53315533:CA:
Gene:: DCP1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00008/1 (ALFA)
HGVS:: NC_000003.12:g.53315534_53315535del, NW_004775426.1:g.164489_164490del, NC_000003.11:g.53349563_53349564del

Select item 149104843716.

rs1491048437 has merged into rs11451581 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAA>-,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 3:53323872 (GRCh38)
3:53357899 (GRCh37)
Canonical SPDI:: NC_000003.12:53323861:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000003.12:53323861:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000003.12:53323861:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000003.12:53323861:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000003.12:53323861:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000003.12:53323861:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000003.12:53323861:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000003.12:53323861:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:53323861:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:53323861:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:53323861:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:53323861:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:53323861:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:53323861:AAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: DCP1A (Varview), LOC124909380 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAA=0./0 (ALFA)
-=0.000004/1 (TOPMED)
A=0.475/19 (GENOME_DK)
HGVS:: NC_000003.12:g.53323872_53323882del, NC_000003.12:g.53323877_53323882del, NC_000003.12:g.53323878_53323882del, NC_000003.12:g.53323879_53323882del, NC_000003.12:g.53323880_53323882del, NC_000003.12:g.53323881_53323882del, NC_000003.12:g.53323882del, NC_000003.12:g.53323882dup, NC_000003.12:g.53323881_53323882dup, NC_000003.12:g.53323880_53323882dup, NC_000003.12:g.53323879_53323882dup, NC_000003.12:g.53323878_53323882dup, NC_000003.12:g.53323876_53323882dup, NC_000003.12:g.53323875_53323882dup, NC_000003.11:g.53357899_53357909del, NC_000003.11:g.53357904_53357909del, NC_000003.11:g.53357905_53357909del, NC_000003.11:g.53357906_53357909del, NC_000003.11:g.53357907_53357909del, NC_000003.11:g.53357908_53357909del, NC_000003.11:g.53357909del, NC_000003.11:g.53357909dup, NC_000003.11:g.53357908_53357909dup, NC_000003.11:g.53357907_53357909dup, NC_000003.11:g.53357906_53357909dup, NC_000003.11:g.53357905_53357909dup, NC_000003.11:g.53357903_53357909dup, NC_000003.11:g.53357902_53357909dup, NW_004775426.1:g.172827_172837del, NW_004775426.1:g.172832_172837del, NW_004775426.1:g.172833_172837del, NW_004775426.1:g.172834_172837del, NW_004775426.1:g.172835_172837del, NW_004775426.1:g.172836_172837del, NW_004775426.1:g.172837del, NW_004775426.1:g.172837dup, NW_004775426.1:g.172836_172837dup, NW_004775426.1:g.172835_172837dup, NW_004775426.1:g.172834_172837dup, NW_004775426.1:g.172833_172837dup, NW_004775426.1:g.172831_172837dup, NW_004775426.1:g.172830_172837dup

Select item 149099147217.

rs1490991472 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 3:53293798 (GRCh38)
3:53327828 (GRCh37)
Canonical SPDI:: NC_000003.12:53293797:C:A
Gene:: DCP1A (Varview), LOC107986087 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000003.12:g.53293798C>A, NW_004775426.1:g.142753C>A, NC_000003.11:g.53327828C>A

Select item 149097450118.

rs1490974501 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:53308333 (GRCh38)
3:53342363 (GRCh37)
Canonical SPDI:: NC_000003.12:53308332:T:C
Gene:: DCP1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.53308333T>C, NW_004775426.1:g.157288T>C, NC_000003.11:g.53342363T>C

Select item 149090514019.

rs1490905140 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:53323793 (GRCh38)
3:53357820 (GRCh37)
Canonical SPDI:: NC_000003.12:53323792:C:T
Gene:: DCP1A (Varview), LOC124909380 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000008/1 (GnomAD)
HGVS:: NC_000003.12:g.53323793C>T, NC_000003.11:g.53357820C>T, NW_004775426.1:g.172748C>T

Select item 149087750320.

rs1490877503 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:53337151 (GRCh38)
3:53371178 (GRCh37)
Canonical SPDI:: NC_000003.12:53337150:G:A
Gene:: DCP1A (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000026/7 (TOPMED)
HGVS:: NC_000003.12:g.53337151G>A, NC_000003.11:g.53371178G>A, NW_004775426.1:g.186106G>A

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