SNP Links for Gene (Select 7480) - SNP

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Select item 14907832381.

rs1490783238 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 12:48965673 (GRCh38)
12:49359456 (GRCh37)
Canonical SPDI:: NC_000012.12:48965672:G:A,NC_000012.12:48965672:G:T
Gene:: WNT10B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000012.12:g.48965673G>A, NC_000012.12:g.48965673G>T, NC_000012.11:g.49359456G>A, NC_000012.11:g.49359456G>T, NG_023347.1:g.11186C>T, NG_023347.1:g.11186C>A, NM_003394.4:c.*422C>T, NM_003394.4:c.*422C>A, NM_003394.3:c.*422C>T, NM_003394.3:c.*422C>A

Select item 14907192372.

rs1490719237 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 12:48966886 (GRCh38)
12:49360669 (GRCh37)
Canonical SPDI:: NC_000012.12:48966885:C:A
Gene:: WNT10B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000156/1 (1000Genomes)
HGVS:: NC_000012.12:g.48966886C>A, NC_000012.11:g.49360669C>A, NG_023347.1:g.9973G>T

Select item 14904235163.

rs1490423516 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 12:48968559 (GRCh38)
12:49362342 (GRCh37)
Canonical SPDI:: NC_000012.12:48968558:T:C
Gene:: WNT10B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000012.12:g.48968559T>C, NC_000012.11:g.49362342T>C, NG_023347.1:g.8300A>G

Select item 14902918294.

rs1490291829 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 12:48965121 (GRCh38)
12:49358904 (GRCh37)
Canonical SPDI:: NC_000012.12:48965120:A:C
Gene:: WNT10B (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.48965121A>C, NC_000012.11:g.49358904A>C, NG_023347.1:g.11738T>G

Select item 14901595605.

rs1490159560 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 12:48972523 (GRCh38)
12:49366306 (GRCh37)
Canonical SPDI:: NC_000012.12:48972522:G:A,NC_000012.12:48972522:G:T
Gene:: WNT10B (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000012.12:g.48972523G>A, NC_000012.12:g.48972523G>T, NC_000012.11:g.49366306G>A, NC_000012.11:g.49366306G>T, NG_023347.1:g.4336C>T, NG_023347.1:g.4336C>A

Select item 14898625706.

rs1489862570 [Homo sapiens]

Variant type:: DELINS
Alleles:: GCGCGCACACACAC>- [Show Flanks]
Chromosome:: 12:48971859 (GRCh38)
12:49365642 (GRCh37)
Canonical SPDI:: NC_000012.12:48971857:CGCGCGCACACACAC:C
Gene:: WNT10B (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.00051/6 (ALFA)
-=0.00041/23 (GnomAD)
HGVS:: NC_000012.12:g.48971859_48971872del, NC_000012.11:g.49365642_49365655del, NG_023347.1:g.4988_5001del, NG_079719.1:g.454_467del

Select item 14896003817.

rs1489600381 [Homo sapiens]

Variant type:: DELINS
Alleles:: GCGCGCGCGCACAC>- [Show Flanks]
Chromosome:: 12:48971855 (GRCh38)
12:49365638 (GRCh37)
Canonical SPDI:: NC_000012.12:48971853:CGCGCGCGCGCACAC:C
Gene:: WNT10B (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0.00025/3 (ALFA)
-=0.00007/5 (GnomAD)
HGVS:: NC_000012.12:g.48971855_48971868del, NC_000012.11:g.49365638_49365651del, NG_023347.1:g.4992_5005del, NG_079719.1:g.450_463del

Select item 14893118718.

rs1489311871 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 12:48969323 (GRCh38)
12:49363106 (GRCh37)
Canonical SPDI:: NC_000012.12:48969322:A:C
Gene:: WNT10B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.48969323A>C, NC_000012.11:g.49363106A>C, NG_023347.1:g.7536T>G

Select item 14892955059.

rs1489295505 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 12:48973679 (GRCh38)
12:49367462 (GRCh37)
Canonical SPDI:: NC_000012.12:48973678:C:T
Gene:: WNT10B (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000015/4 (TOPMED)
HGVS:: NC_000012.12:g.48973679C>T, NC_000012.11:g.49367462C>T, NG_023347.1:g.3180G>A, NG_033141.1:g.227C>T

Select item 148852420010.

rs1488524200 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 12:48968441 (GRCh38)
12:49362224 (GRCh37)
Canonical SPDI:: NC_000012.12:48968440:C:A,NC_000012.12:48968440:C:T
Gene:: WNT10B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000066/1 (ALFA)
T=0.000004/1 (TOPMED)
A=0.000223/1 (Estonian)
HGVS:: NC_000012.12:g.48968441C>A, NC_000012.12:g.48968441C>T, NC_000012.11:g.49362224C>A, NC_000012.11:g.49362224C>T, NG_023347.1:g.8418G>T, NG_023347.1:g.8418G>A

Select item 148839295211.

rs1488392952 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 12:48967675 (GRCh38)
12:49361458 (GRCh37)
Canonical SPDI:: NC_000012.12:48967674:C:G
Gene:: WNT10B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.48967675C>G, NC_000012.11:g.49361458C>G, NG_023347.1:g.9184G>C

Select item 148784628712.

rs1487846287 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 12:48966445 (GRCh38)
12:49360228 (GRCh37)
Canonical SPDI:: NC_000012.12:48966444:C:A
Gene:: WNT10B (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000012.12:g.48966445C>A, NC_000012.11:g.49360228C>A, NG_023347.1:g.10414G>T, NM_003394.4:c.820G>T, NM_003394.3:c.820G>T, NP_003385.2:p.Ala274Ser

Select item 148773980713.

rs1487739807 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 12:48969979 (GRCh38)
12:49363762 (GRCh37)
Canonical SPDI:: NC_000012.12:48969978:A:T
Gene:: WNT10B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000022/3 (GnomAD)
HGVS:: NC_000012.12:g.48969979A>T, NC_000012.11:g.49363762A>T, NG_023347.1:g.6880T>A

Select item 148649830414.

rs1486498304 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 12:48970504 (GRCh38)
12:49364287 (GRCh37)
Canonical SPDI:: NC_000012.12:48970503:G:A,NC_000012.12:48970503:G:C
Gene:: WNT10B (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000054/1 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
C=0.000223/1 (Estonian)
HGVS:: NC_000012.12:g.48970504G>A, NC_000012.12:g.48970504G>C, NC_000012.11:g.49364287G>A, NC_000012.11:g.49364287G>C, NG_023347.1:g.6355C>T, NG_023347.1:g.6355C>G, NM_003394.4:c.26C>T, NM_003394.4:c.26C>G, NM_003394.3:c.26C>T, NM_003394.3:c.26C>G, NP_003385.2:p.Pro9Leu, NP_003385.2:p.Pro9Arg

Select item 148617443415.

rs1486174434 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 12:48965550 (GRCh38)
12:49359333 (GRCh37)
Canonical SPDI:: NC_000012.12:48965549:A:G
Gene:: WNT10B (Varview)
Functional Consequence:: 3_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000012.12:g.48965550A>G, NC_000012.11:g.49359333A>G, NG_023347.1:g.11309T>C, NM_003394.4:c.*545T>C, NM_003394.3:c.*545T>C

Select item 148616503016.

rs1486165030 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 12:48970203 (GRCh38)
12:49363986 (GRCh37)
Canonical SPDI:: NC_000012.12:48970202:C:T
Gene:: WNT10B (Varview)
Functional Consequence:: coding_sequence_variant,missense_variant
HGVS:: NC_000012.12:g.48970203C>T, NC_000012.11:g.49363986C>T, NG_023347.1:g.6656G>A, NM_003394.4:c.223G>A, NM_003394.3:c.223G>A, NP_003385.2:p.Gly75Ser

Select item 148602855617.

rs1486028556 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 12:48971695 (GRCh38)
12:49365478 (GRCh37)
Canonical SPDI:: NC_000012.12:48971694:G:T
Gene:: WNT10B (Varview)
Functional Consequence:: 5_prime_UTR_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000012.12:g.48971695G>T, NC_000012.11:g.49365478G>T, NG_023347.1:g.5164C>A, NM_003394.4:c.-281C>A, NM_003394.3:c.-281C>A, NG_079719.1:g.290G>T

Select item 148593785318.

rs1485937853 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 12:48969938 (GRCh38)
12:49363721 (GRCh37)
Canonical SPDI:: NC_000012.12:48969937:C:A,NC_000012.12:48969937:C:G
Gene:: WNT10B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.48969938C>A, NC_000012.12:g.48969938C>G, NC_000012.11:g.49363721C>A, NC_000012.11:g.49363721C>G, NG_023347.1:g.6921G>T, NG_023347.1:g.6921G>C

Select item 148548904719.

rs1485489047 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 12:48969161 (GRCh38)
12:49362944 (GRCh37)
Canonical SPDI:: NC_000012.12:48969160:G:A
Gene:: WNT10B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
A=0.000014/2 (GnomAD_exomes)
HGVS:: NC_000012.12:g.48969161G>A, NC_000012.11:g.49362944G>A, NG_023347.1:g.7698C>T

Select item 148537254020.

rs1485372540 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 12:48969407 (GRCh38)
12:49363190 (GRCh37)
Canonical SPDI:: NC_000012.12:48969406:C:T
Gene:: WNT10B (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000214/3 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000026/7 (TOPMED)
HGVS:: NC_000012.12:g.48969407C>T, NC_000012.11:g.49363190C>T, NG_023347.1:g.7452G>A

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