SNP Links for Gene (Select 81399) - SNP

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Links from Gene

Items: 1 to 20 of 1000

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Select item 14913528761.

rs1491352876 [Homo sapiens]

Variant type:: DEL
Alleles:: TT>- [Show Flanks]
Chromosome:: 1:712055 (GRCh38)
1:647435 (GRCh37)
Canonical SPDI:: NC_000001.11:712054:TT:
Gene:: OR4F16 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000001.11:g.712055_712056del, NC_000001.10:g.647435_647436del

Select item 14912582482.

rs1491258248 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AT [Show Flanks]
Chromosome:: 1:712055 (GRCh38)
1:647436 (GRCh37)
Canonical SPDI:: NC_000001.11:712055:TATATAT:TATATATAT
Gene:: OR4F16 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: TATATATAT=0./0 (ALFA)
HGVS:: NC_000001.11:g.712057AT[4], NC_000001.10:g.647437AT[4]

Select item 14906595023.

rs1490659502 [Homo sapiens]

Variant type:: DELINS
Alleles:: TACAT>- [Show Flanks]
Chromosome:: 1:715988 (GRCh38)
1:651368 (GRCh37)
Canonical SPDI:: NC_000001.11:715980:ATTACATTACAT:ATTACAT
Gene:: OR4F16 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: ATTACAT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.715983TACAT[1], NC_000001.10:g.651363TACAT[1]

Select item 14903894054.

rs1490389405 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:703382 (GRCh38)
1:638762 (GRCh37)
Canonical SPDI:: NC_000001.11:703381:C:T
Gene:: OR4F16 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.00185/22 (ALFA)
HGVS:: NC_000001.11:g.703382C>T, NC_000001.10:g.638762C>T

Select item 14903363955.

rs1490336395 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:714687 (GRCh38)
1:650067 (GRCh37)
Canonical SPDI:: NC_000001.11:714686:C:G
Gene:: OR4F16 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000001.11:g.714687C>G, NC_000001.10:g.650067C>G

Select item 14901621156.

rs1490162115 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:698681 (GRCh38)
1:634061 (GRCh37)
Canonical SPDI:: NC_000001.11:698680:T:C
Gene:: OR4F16 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000001.11:g.698681T>C, NC_000001.10:g.634061T>C

Select item 14900747057.

rs1490074705 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:702977 (GRCh38)
1:638357 (GRCh37)
Canonical SPDI:: NC_000001.11:702976:C:A
Gene:: OR4F16 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.02934/348 (ALFA)
A=0.05309/313 (TOMMO)
A=0.15693/86 (KOREAN)
HGVS:: NC_000001.11:g.702977C>A, NC_000001.10:g.638357C>A

Select item 14900639448.

rs1490063944 [Homo sapiens]

Variant type:: DEL
Alleles:: G>- [Show Flanks]
Chromosome:: 1:711117 (GRCh38)
1:646497 (GRCh37)
Canonical SPDI:: NC_000001.11:711116:G:
Gene:: OR4F16 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency
MAF:: -=0.000009/1 (GnomAD)
HGVS:: NC_000001.11:g.711117del, NC_000001.10:g.646497del

Select item 14899104099.

rs1489910409 [Homo sapiens]

Variant type:: DEL
Alleles:: GGAAGAGAAGC>- [Show Flanks]
Chromosome:: 1:701789 (GRCh38)
1:637169 (GRCh37)
Canonical SPDI:: NC_000001.11:701788:GGAAGAGAAGC:
Gene:: OR4F16 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.701789_701799del, NC_000001.10:g.637169_637179del

Select item 148986039710.

rs1489860397 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:709434 (GRCh38)
1:644814 (GRCh37)
Canonical SPDI:: NC_000001.11:709433:T:C
Gene:: OR4F16 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.00084/10 (ALFA)
HGVS:: NC_000001.11:g.709434T>C, NC_000001.10:g.644814T>C

Select item 148984656411.

rs1489846564 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 1:715410 (GRCh38)
1:650790 (GRCh37)
Canonical SPDI:: NC_000001.11:715409:T:A
Gene:: OR4F16 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.00009/2 (TOMMO)
A=0.00227/5 (KOREAN)
HGVS:: NC_000001.11:g.715410T>A, NC_000001.10:g.650790T>A

Select item 148981608012.

rs1489816080 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:714072 (GRCh38)
1:649452 (GRCh37)
Canonical SPDI:: NC_000001.11:714071:T:C
Gene:: OR4F16 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.714072T>C, NC_000001.10:g.649452T>C

Select item 148956636913.

rs1489566369 [Homo sapiens]

Variant type:: INS
Alleles:: ->TG [Show Flanks]
Chromosome:: 1:714376 (GRCh38)
1:649757 (GRCh37)
Canonical SPDI:: NC_000001.11:714376::TG
Gene:: OR4F16 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: TG=0.00008/1 (ALFA)
HGVS:: NC_000001.11:g.714376_714377insTG, NC_000001.10:g.649756_649757insTG

Select item 148937128914.

rs1489371289 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:695396 (GRCh38)
1:630776 (GRCh37)
Canonical SPDI:: NC_000001.11:695395:A:G
Gene:: OR4F16 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.03153/374 (ALFA)
G=0.02724/191 (TOMMO)
G=0.13504/74 (KOREAN)
HGVS:: NC_000001.11:g.695396A>G, NC_000001.10:g.630776A>G

Select item 148935130215.

rs1489351302 [Homo sapiens]

Variant type:: DELINS
Alleles:: GTAT>- [Show Flanks]
Chromosome:: 1:712043 (GRCh38)
1:647423 (GRCh37)
Canonical SPDI:: NC_000001.11:712039:TATGTAT:TAT
Gene:: OR4F16 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TAT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.00036/6 (TOMMO)
HGVS:: NC_000001.11:g.712043_712046del, NC_000001.10:g.647423_647426del

Select item 148931894216.

rs1489318942 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:710205 (GRCh38)
1:645585 (GRCh37)
Canonical SPDI:: NC_000001.11:710204:T:C
Gene:: OR4F16 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000001.11:g.710205T>C, NC_000001.10:g.645585T>C

Select item 148927540117.

rs1489275401 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:713657 (GRCh38)
1:649037 (GRCh37)
Canonical SPDI:: NC_000001.11:713656:C:T
Gene:: OR4F16 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000001.11:g.713657C>T, NC_000001.10:g.649037C>T

Select item 148917999518.

rs1489179995 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:713178 (GRCh38)
1:648558 (GRCh37)
Canonical SPDI:: NC_000001.11:713177:T:C
Gene:: OR4F16 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000001.11:g.713178T>C, NC_000001.10:g.648558T>C

Select item 148912236519.

rs1489122365 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 1:690907 (GRCh38)
1:626287 (GRCh37)
Canonical SPDI:: NC_000001.11:690906:T:A
Gene:: OR4F16 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.690907T>A, NC_000001.10:g.626287T>A

Select item 148910999420.

rs1489109994 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:714134 (GRCh38)
1:649514 (GRCh37)
Canonical SPDI:: NC_000001.11:714133:C:T
Gene:: OR4F16 (Varview)
Functional Consequence:: intron_variant,genic_upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.00001/1 (GnomAD)
HGVS:: NC_000001.11:g.714134C>T, NC_000001.10:g.649514C>T

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