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Items: 1 to 20 of 1085

2.

rs1489915913 has merged into rs966712982 [Homo sapiens]
    Variant type:
    DELINS
    Alleles:
    A>-,AA [Show Flanks]
    Chromosome:
    21:25881013 (GRCh38)
    21:27253324 (GRCh37)
    Canonical SPDI:
    NC_000021.9:25881012:AAAAAAA:AAAAAA,NC_000021.9:25881012:AAAAAAA:AAAAAAAA
    Gene:
    APP (Varview)
    Functional Consequence:
    3_prime_UTR_variant
    Validated:
    by frequency,by alfa,by cluster
    MAF:
    AAAAAAAA=0./0 (ALFA)
    -=0.00004/1 (TOMMO)
    HGVS:
    NC_000021.9:g.25881019del, NC_000021.9:g.25881019dup, NC_000021.8:g.27253330del, NC_000021.8:g.27253330dup, NG_007376.2:g.295116del, NG_007376.2:g.295116dup, NM_000484.4:c.*657del, NM_000484.4:c.*657dup, NM_000484.3:c.*657del, NM_000484.3:c.*657dup, NM_001136016.3:c.*657del, NM_001136016.3:c.*657dup, NM_201413.3:c.*657del, NM_201413.3:c.*657dup, NM_201413.2:c.*657del, NM_201413.2:c.*657dup, NM_001136130.3:c.*657del, NM_001136130.3:c.*657dup, NM_001136130.2:c.*657del, NM_001136130.2:c.*657dup, NM_201414.3:c.*657del, NM_201414.3:c.*657dup, NM_201414.2:c.*657del, NM_201414.2:c.*657dup, NM_001136131.3:c.*657del, NM_001136131.3:c.*657dup, NM_001136131.2:c.*657del, NM_001136131.2:c.*657dup, NM_001136129.3:c.*657del, NM_001136129.3:c.*657dup, NM_001136129.2:c.*657del, NM_001136129.2:c.*657dup, NM_001204301.2:c.*657del, NM_001204301.2:c.*657dup, NM_001204301.1:c.*657del, NM_001204301.1:c.*657dup, NM_001204302.2:c.*657del, NM_001204302.2:c.*657dup, NM_001204302.1:c.*657del, NM_001204302.1:c.*657dup, NM_001204303.2:c.*657del, NM_001204303.2:c.*657dup, NM_001204303.1:c.*657del, NM_001204303.1:c.*657dup, NM_001385253.1:c.*657del, NM_001385253.1:c.*657dup
    3.

    rs1489658935 [Homo sapiens]
      Variant type:
      SNV
      Alleles:
      A>G [Show Flanks]
      Chromosome:
      21:26140224 (GRCh38)
      21:27512542 (GRCh37)
      Canonical SPDI:
      NC_000021.9:26140223:A:G
      Gene:
      APP (Varview), LOC124900466 (Varview)
      Functional Consequence:
      5_prime_UTR_variant,intron_variant
      Validated:
      by frequency,by alfa,by cluster
      MAF:
      G=0.000198/3 (ALFA)
      G=0.000004/1 (TOPMED)
      G=0.000014/2 (GnomAD)
      G=0.000446/2 (Estonian)
      HGVS:
      8.

      rs1486755973 [Homo sapiens]
        Variant type:
        SNV
        Alleles:
        G>A,C,T [Show Flanks]
        Chromosome:
        21:25880957 (GRCh38)
        21:27253268 (GRCh37)
        Canonical SPDI:
        NC_000021.9:25880956:G:A,NC_000021.9:25880956:G:C,NC_000021.9:25880956:G:T
        Gene:
        APP (Varview)
        Functional Consequence:
        3_prime_UTR_variant
        Validated:
        by frequency,by alfa,by cluster
        MAF:
        A=0.00067/8 (ALFA)
        A=0.00166/3 (Korea1K)
        A=0.02677/78 (KOREAN)
        HGVS:
        NC_000021.9:g.25880957G>A, NC_000021.9:g.25880957G>C, NC_000021.9:g.25880957G>T, NC_000021.8:g.27253268G>A, NC_000021.8:g.27253268G>C, NC_000021.8:g.27253268G>T, NG_007376.2:g.295172C>T, NG_007376.2:g.295172C>G, NG_007376.2:g.295172C>A, NM_000484.4:c.*713C>T, NM_000484.4:c.*713C>G, NM_000484.4:c.*713C>A, NM_000484.3:c.*713C>T, NM_000484.3:c.*713C>G, NM_000484.3:c.*713C>A, NM_001136016.3:c.*713C>T, NM_001136016.3:c.*713C>G, NM_001136016.3:c.*713C>A, NM_201413.3:c.*713C>T, NM_201413.3:c.*713C>G, NM_201413.3:c.*713C>A, NM_201413.2:c.*713C>T, NM_201413.2:c.*713C>G, NM_201413.2:c.*713C>A, NM_001136130.3:c.*713C>T, NM_001136130.3:c.*713C>G, NM_001136130.3:c.*713C>A, NM_001136130.2:c.*713C>T, NM_001136130.2:c.*713C>G, NM_001136130.2:c.*713C>A, NM_201414.3:c.*713C>T, NM_201414.3:c.*713C>G, NM_201414.3:c.*713C>A, NM_201414.2:c.*713C>T, NM_201414.2:c.*713C>G, NM_201414.2:c.*713C>A, NM_001136131.3:c.*713C>T, NM_001136131.3:c.*713C>G, NM_001136131.3:c.*713C>A, NM_001136131.2:c.*713C>T, NM_001136131.2:c.*713C>G, NM_001136131.2:c.*713C>A, NM_001136129.3:c.*713C>T, NM_001136129.3:c.*713C>G, NM_001136129.3:c.*713C>A, NM_001136129.2:c.*713C>T, NM_001136129.2:c.*713C>G, NM_001136129.2:c.*713C>A, NM_001204301.2:c.*713C>T, NM_001204301.2:c.*713C>G, NM_001204301.2:c.*713C>A, NM_001204301.1:c.*713C>T, NM_001204301.1:c.*713C>G, NM_001204301.1:c.*713C>A, NM_001204302.2:c.*713C>T, NM_001204302.2:c.*713C>G, NM_001204302.2:c.*713C>A, NM_001204302.1:c.*713C>T, NM_001204302.1:c.*713C>G, NM_001204302.1:c.*713C>A, NM_001204303.2:c.*713C>T, NM_001204303.2:c.*713C>G, NM_001204303.2:c.*713C>A, NM_001204303.1:c.*713C>T, NM_001204303.1:c.*713C>G, NM_001204303.1:c.*713C>A, NM_001385253.1:c.*713C>T, NM_001385253.1:c.*713C>G, NM_001385253.1:c.*713C>A
        10.

        rs1484754023 [Homo sapiens]
          Variant type:
          SNV:
          Alleles:
          A>G
          Chromosome:
          no mapping
          Canonical SPDI:
          11.
          14.

          rs1481257485 [Homo sapiens]
            Variant type:
            SNV
            Alleles:
            G>A,C [Show Flanks]
            Chromosome:
            21:25881620 (GRCh38)
            21:27253931 (GRCh37)
            Canonical SPDI:
            NC_000021.9:25881619:G:A,NC_000021.9:25881619:G:C
            Gene:
            APP (Varview)
            Functional Consequence:
            3_prime_UTR_variant
            Validated:
            by frequency,by alfa,by cluster
            MAF:
            A=0./0 (ALFA)
            A=0.000004/1 (GnomAD_exomes)
            A=0.000004/1 (TOPMED)
            A=0.000007/1 (GnomAD)
            C=0.000071/1 (TOMMO)
            HGVS:
            NC_000021.9:g.25881620G>A, NC_000021.9:g.25881620G>C, NC_000021.8:g.27253931G>A, NC_000021.8:g.27253931G>C, NG_007376.2:g.294509C>T, NG_007376.2:g.294509C>G, NM_000484.4:c.*50C>T, NM_000484.4:c.*50C>G, NM_000484.3:c.*50C>T, NM_000484.3:c.*50C>G, NM_001136016.3:c.*50C>T, NM_001136016.3:c.*50C>G, NM_201413.3:c.*50C>T, NM_201413.3:c.*50C>G, NM_201413.2:c.*50C>T, NM_201413.2:c.*50C>G, NM_001136130.3:c.*50C>T, NM_001136130.3:c.*50C>G, NM_001136130.2:c.*50C>T, NM_001136130.2:c.*50C>G, NM_201414.3:c.*50C>T, NM_201414.3:c.*50C>G, NM_201414.2:c.*50C>T, NM_201414.2:c.*50C>G, NM_001136131.3:c.*50C>T, NM_001136131.3:c.*50C>G, NM_001136131.2:c.*50C>T, NM_001136131.2:c.*50C>G, NM_001136129.3:c.*50C>T, NM_001136129.3:c.*50C>G, NM_001136129.2:c.*50C>T, NM_001136129.2:c.*50C>G, NM_001204301.2:c.*50C>T, NM_001204301.2:c.*50C>G, NM_001204301.1:c.*50C>T, NM_001204301.1:c.*50C>G, NM_001204302.2:c.*50C>T, NM_001204302.2:c.*50C>G, NM_001204302.1:c.*50C>T, NM_001204302.1:c.*50C>G, NM_001204303.2:c.*50C>T, NM_001204303.2:c.*50C>G, NM_001204303.1:c.*50C>T, NM_001204303.1:c.*50C>G, NM_001385253.1:c.*50C>T, NM_001385253.1:c.*50C>G
            16.

            rs1477489193 [Homo sapiens]
              Variant type:
              SNV
              Alleles:
              C>G,T [Show Flanks]
              Chromosome:
              21:25881006 (GRCh38)
              21:27253317 (GRCh37)
              Canonical SPDI:
              NC_000021.9:25881005:C:G,NC_000021.9:25881005:C:T
              Gene:
              APP (Varview)
              Functional Consequence:
              3_prime_UTR_variant
              Validated:
              by frequency,by alfa,by cluster
              MAF:
              T=0./0 (ALFA)
              T=0.000009/1 (GnomAD)
              T=0.000035/1 (TOMMO)
              HGVS:
              NC_000021.9:g.25881006C>G, NC_000021.9:g.25881006C>T, NC_000021.8:g.27253317C>G, NC_000021.8:g.27253317C>T, NG_007376.2:g.295123G>C, NG_007376.2:g.295123G>A, NM_000484.4:c.*664G>C, NM_000484.4:c.*664G>A, NM_000484.3:c.*664G>C, NM_000484.3:c.*664G>A, NM_001136016.3:c.*664G>C, NM_001136016.3:c.*664G>A, NM_201413.3:c.*664G>C, NM_201413.3:c.*664G>A, NM_201413.2:c.*664G>C, NM_201413.2:c.*664G>A, NM_001136130.3:c.*664G>C, NM_001136130.3:c.*664G>A, NM_001136130.2:c.*664G>C, NM_001136130.2:c.*664G>A, NM_201414.3:c.*664G>C, NM_201414.3:c.*664G>A, NM_201414.2:c.*664G>C, NM_201414.2:c.*664G>A, NM_001136131.3:c.*664G>C, NM_001136131.3:c.*664G>A, NM_001136131.2:c.*664G>C, NM_001136131.2:c.*664G>A, NM_001136129.3:c.*664G>C, NM_001136129.3:c.*664G>A, NM_001136129.2:c.*664G>C, NM_001136129.2:c.*664G>A, NM_001204301.2:c.*664G>C, NM_001204301.2:c.*664G>A, NM_001204301.1:c.*664G>C, NM_001204301.1:c.*664G>A, NM_001204302.2:c.*664G>C, NM_001204302.2:c.*664G>A, NM_001204302.1:c.*664G>C, NM_001204302.1:c.*664G>A, NM_001204303.2:c.*664G>C, NM_001204303.2:c.*664G>A, NM_001204303.1:c.*664G>C, NM_001204303.1:c.*664G>A, NM_001385253.1:c.*664G>C, NM_001385253.1:c.*664G>A
              17.

              rs1476605928 [Homo sapiens]
                Variant type:
                SNV
                Alleles:
                T>A,C [Show Flanks]
                Chromosome:
                21:25880937 (GRCh38)
                21:27253248 (GRCh37)
                Canonical SPDI:
                NC_000021.9:25880936:T:A,NC_000021.9:25880936:T:C
                Gene:
                APP (Varview)
                Functional Consequence:
                3_prime_UTR_variant
                Validated:
                by frequency,by alfa,by cluster
                MAF:
                C=0.04086/664 (ALFA)
                C=0.04768/795 (TOMMO)
                C=0.12045/351 (KOREAN)
                HGVS:
                NC_000021.9:g.25880937T>A, NC_000021.9:g.25880937T>C, NC_000021.8:g.27253248T>A, NC_000021.8:g.27253248T>C, NG_007376.2:g.295192A>T, NG_007376.2:g.295192A>G, NM_000484.4:c.*733A>T, NM_000484.4:c.*733A>G, NM_000484.3:c.*733A>T, NM_000484.3:c.*733A>G, NM_001136016.3:c.*733A>T, NM_001136016.3:c.*733A>G, NM_201413.3:c.*733A>T, NM_201413.3:c.*733A>G, NM_201413.2:c.*733A>T, NM_201413.2:c.*733A>G, NM_001136130.3:c.*733A>T, NM_001136130.3:c.*733A>G, NM_001136130.2:c.*733A>T, NM_001136130.2:c.*733A>G, NM_201414.3:c.*733A>T, NM_201414.3:c.*733A>G, NM_201414.2:c.*733A>T, NM_201414.2:c.*733A>G, NM_001136131.3:c.*733A>T, NM_001136131.3:c.*733A>G, NM_001136131.2:c.*733A>T, NM_001136131.2:c.*733A>G, NM_001136129.3:c.*733A>T, NM_001136129.3:c.*733A>G, NM_001136129.2:c.*733A>T, NM_001136129.2:c.*733A>G, NM_001204301.2:c.*733A>T, NM_001204301.2:c.*733A>G, NM_001204301.1:c.*733A>T, NM_001204301.1:c.*733A>G, NM_001204302.2:c.*733A>T, NM_001204302.2:c.*733A>G, NM_001204302.1:c.*733A>T, NM_001204302.1:c.*733A>G, NM_001204303.2:c.*733A>T, NM_001204303.2:c.*733A>G, NM_001204303.1:c.*733A>T, NM_001204303.1:c.*733A>G, NM_001385253.1:c.*733A>T, NM_001385253.1:c.*733A>G
                19.

                rs1476363021 [Homo sapiens]
                  Variant type:
                  SNV
                  Alleles:
                  G>A,T [Show Flanks]
                  Chromosome:
                  21:25955678 (GRCh38)
                  21:27327992 (GRCh37)
                  Canonical SPDI:
                  NC_000021.9:25955677:G:A,NC_000021.9:25955677:G:T
                  Gene:
                  APP (Varview)
                  Functional Consequence:
                  missense_variant,synonymous_variant,coding_sequence_variant
                  Validated:
                  by frequency,by alfa,by cluster
                  MAF:
                  A=0./0 (ALFA)
                  A=0.000004/1 (GnomAD_exomes)
                  A=0.000004/1 (TOPMED)
                  T=0.000035/1 (TOMMO)
                  HGVS:
                  NC_000021.9:g.25955678G>A, NC_000021.9:g.25955678G>T, NC_000021.8:g.27327992G>A, NC_000021.8:g.27327992G>T, NG_007376.2:g.220451C>T, NG_007376.2:g.220451C>A, NM_000484.4:c.1536C>T, NM_000484.4:c.1536C>A, NM_000484.3:c.1536C>T, NM_000484.3:c.1536C>A, NM_001136016.3:c.1464C>T, NM_001136016.3:c.1464C>A, NM_201413.3:c.1479C>T, NM_201413.3:c.1479C>A, NM_201413.2:c.1479C>T, NM_201413.2:c.1479C>A, NM_001136130.3:c.1368C>T, NM_001136130.3:c.1368C>A, NM_001136130.2:c.1368C>T, NM_001136130.2:c.1368C>A, NM_201414.3:c.1311C>T, NM_201414.3:c.1311C>A, NM_201414.2:c.1311C>T, NM_201414.2:c.1311C>A, NM_001136131.3:c.1206C>T, NM_001136131.3:c.1206C>A, NM_001136131.2:c.1206C>T, NM_001136131.2:c.1206C>A, NM_001136129.3:c.1143C>T, NM_001136129.3:c.1143C>A, NM_001136129.2:c.1143C>T, NM_001136129.2:c.1143C>A, NM_001204301.2:c.1536C>T, NM_001204301.2:c.1536C>A, NM_001204301.1:c.1536C>T, NM_001204301.1:c.1536C>A, NM_001204302.2:c.1479C>T, NM_001204302.2:c.1479C>A, NM_001204302.1:c.1479C>T, NM_001204302.1:c.1479C>A, NM_001204303.2:c.1311C>T, NM_001204303.2:c.1311C>A, NM_001204303.1:c.1311C>T, NM_001204303.1:c.1311C>A, NM_001385253.1:c.1368C>T, NM_001385253.1:c.1368C>A, NG_081823.1:g.1115G>A, NG_081823.1:g.1115G>T, NP_000475.1:p.Phe512Leu, NP_001129488.1:p.Phe488Leu, NP_958816.1:p.Phe493Leu, NP_001129602.1:p.Phe456Leu, NP_958817.1:p.Phe437Leu, NP_001129603.1:p.Phe402Leu, NP_001129601.1:p.Phe381Leu, NP_001191230.1:p.Phe512Leu, NP_001191231.1:p.Phe493Leu, NP_001191232.1:p.Phe437Leu, NP_001372182.1:p.Phe456Leu

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