SNP Links for Nucleotide (Select 821325153) - SNP

Links from Nucleotide

Items: 1 to 20 of 120

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Select item 14903609091.

rs1490360909 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:53331217 (GRCh38)
1:53796889 (GRCh37)
Canonical SPDI:: NC_000001.11:53331216:G:A
Gene:: LRP8-DT (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.53331217G>A, NC_000001.10:g.53796889G>A, NG_011517.2:g.1933C>T, NR_131923.1:n.193G>A

Select item 14847407422.

rs1484740742 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:53336471 (GRCh38)
1:53802143 (GRCh37)
Canonical SPDI:: NC_000001.11:53336470:G:A
Gene:: LOC105378731 (Varview), LRP8-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.53336471G>A, NC_000001.10:g.53802143G>A, NR_131923.1:n.529G>A

Select item 14838396613.

rs1483839661 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:53328311 (GRCh38)
1:53793983 (GRCh37)
Canonical SPDI:: NC_000001.11:53328310:C:A
Gene:: LRP8 (Varview), LRP8-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000015/4 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.53328311C>A, NC_000001.10:g.53793983C>A, NG_011517.2:g.4839G>T, NR_131923.1:n.79C>A

Select item 14831772544.

rs1483177254 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:53336265 (GRCh38)
1:53801937 (GRCh37)
Canonical SPDI:: NC_000001.11:53336264:G:A
Gene:: LOC105378731 (Varview), LRP8-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.00046/8 (TOMMO)
HGVS:: NC_000001.11:g.53336265G>A, NC_000001.10:g.53801937G>A, NR_131923.1:n.323G>A

Select item 14796686555.

rs1479668655 [Homo sapiens]

Variant type:: DEL
Alleles:: TCATCTTTGTCTTCA>- [Show Flanks]
Chromosome:: 1:53331199 (GRCh38)
1:53796871 (GRCh37)
Canonical SPDI:: NC_000001.11:53331198:TCATCTTTGTCTTCA:
Gene:: LRP8-DT (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.53331199_53331213del, NC_000001.10:g.53796871_53796885del, NG_011517.2:g.1937_1951del, NR_131923.1:n.175_189del

Select item 14733958196.

rs1473395819 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:53328362 (GRCh38)
1:53794034 (GRCh37)
Canonical SPDI:: NC_000001.11:53328361:G:A
Gene:: LRP8 (Varview), LRP8-DT (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.53328362G>A, NC_000001.10:g.53794034G>A, NG_011517.2:g.4788C>T, NR_131923.1:n.130G>A

Select item 14593172747.

rs1459317274 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:53336425 (GRCh38)
1:53802097 (GRCh37)
Canonical SPDI:: NC_000001.11:53336424:T:G
Gene:: LOC105378731 (Varview), LRP8-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000015/4 (TOPMED)
HGVS:: NC_000001.11:g.53336425T>G, NC_000001.10:g.53802097T>G, NR_131923.1:n.483T>G

Select item 14541467048.

rs1454146704 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:53336233 (GRCh38)
1:53801905 (GRCh37)
Canonical SPDI:: NC_000001.11:53336232:A:G
Gene:: LOC105378731 (Varview), LRP8-DT (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
G=0.000035/1 (TOMMO)
HGVS:: NC_000001.11:g.53336233A>G, NC_000001.10:g.53801905A>G, NR_131923.1:n.291A>G

Select item 14509299579.

rs1450929957 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:53328354 (GRCh38)
1:53794026 (GRCh37)
Canonical SPDI:: NC_000001.11:53328353:C:T
Gene:: LRP8 (Varview), LRP8-DT (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0./0 (GnomAD)
T=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.53328354C>T, NC_000001.10:g.53794026C>T, NG_011517.2:g.4796G>A, NR_131923.1:n.122C>T

Select item 144875299310.

rs1448752993 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 1:53336386 (GRCh38)
1:53802058 (GRCh37)
Canonical SPDI:: NC_000001.11:53336385:G:A,NC_000001.11:53336385:G:T
Gene:: LOC105378731 (Varview), LRP8-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.53336386G>A, NC_000001.11:g.53336386G>T, NC_000001.10:g.53802058G>A, NC_000001.10:g.53802058G>T, NR_131923.1:n.444G>A, NR_131923.1:n.444G>T

Select item 143783417211.

rs1437834172 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:53336508 (GRCh38)
1:53802180 (GRCh37)
Canonical SPDI:: NC_000001.11:53336507:C:A
Gene:: LOC105378731 (Varview), LRP8-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.53336508C>A, NC_000001.10:g.53802180C>A, NR_131923.1:n.566C>A

Select item 143682371212.

rs1436823712 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:53336361 (GRCh38)
1:53802033 (GRCh37)
Canonical SPDI:: NC_000001.11:53336360:C:T
Gene:: LOC105378731 (Varview), LRP8-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00004/1 (TOMMO)
T=0.00034/1 (KOREAN)
HGVS:: NC_000001.11:g.53336361C>T, NC_000001.10:g.53802033C>T, NR_131923.1:n.419C>T

Select item 143062780913.

rs1430627809 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:53336221 (GRCh38)
1:53801893 (GRCh37)
Canonical SPDI:: NC_000001.11:53336220:C:T
Gene:: LOC105378731 (Varview), LRP8-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.53336221C>T, NC_000001.10:g.53801893C>T, NR_131923.1:n.279C>T

Select item 142537474214.

rs1425374742 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:53331173 (GRCh38)
1:53796845 (GRCh37)
Canonical SPDI:: NC_000001.11:53331172:G:A
Gene:: LRP8-DT (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.53331173G>A, NC_000001.10:g.53796845G>A, NG_011517.2:g.1977C>T, NR_131923.1:n.149G>A

Select item 142326487715.

rs1423264877 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:53336351 (GRCh38)
1:53802023 (GRCh37)
Canonical SPDI:: NC_000001.11:53336350:A:G
Gene:: LOC105378731 (Varview), LRP8-DT (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
G=0.000023/6 (TOPMED)
HGVS:: NC_000001.11:g.53336351A>G, NC_000001.10:g.53802023A>G, NR_131923.1:n.409A>G

Select item 141344852616.

rs1413448526 [Homo sapiens]

Variant type:: DEL
Alleles:: G>- [Show Flanks]
Chromosome:: 1:53336429 (GRCh38)
1:53802101 (GRCh37)
Canonical SPDI:: NC_000001.11:53336428:G:
Gene:: LOC105378731 (Varview), LRP8-DT (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000001.11:g.53336429del, NC_000001.10:g.53802101del, NR_131923.1:n.487del

Select item 140493083017.

rs1404930830 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:53328340 (GRCh38)
1:53794012 (GRCh37)
Canonical SPDI:: NC_000001.11:53328339:A:C
Gene:: LRP8 (Varview), LRP8-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.53328340A>C, NC_000001.10:g.53794012A>C, NG_011517.2:g.4810T>G, NR_131923.1:n.108A>C

Select item 139302201718.

rs1393022017 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:53331177 (GRCh38)
1:53796849 (GRCh37)
Canonical SPDI:: NC_000001.11:53331176:C:A
Gene:: LRP8-DT (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.53331177C>A, NC_000001.10:g.53796849C>A, NG_011517.2:g.1973G>T, NR_131923.1:n.153C>A

Select item 137403027819.

rs1374030278 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:53328250 (GRCh38)
1:53793922 (GRCh37)
Canonical SPDI:: NC_000001.11:53328249:G:T
Gene:: LRP8 (Varview), LRP8-DT (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.53328250G>T, NC_000001.10:g.53793922G>T, NG_011517.2:g.4900C>A, NR_131923.1:n.18G>T

Select item 137388583420.

rs1373885834 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 1:53331191 (GRCh38)
1:53796863 (GRCh37)
Canonical SPDI:: NC_000001.11:53331190:T:A
Gene:: LRP8-DT (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.53331191T>A, NC_000001.10:g.53796863T>A, NG_011517.2:g.1959A>T, NR_131923.1:n.167T>A

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