SNP Links for Protein (Select 203098098) - SNP

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Links from Protein

Items: 1 to 20 of 2087

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Select item 14906798641.

rs1490679864 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 4:76755074 (GRCh38)
4:77676227 (GRCh37)
Canonical SPDI:: NC_000004.12:76755073:C:G
Gene:: SHROOM3 (Varview), SHROOM3-AS1 (Varview)
Functional Consequence:: intron_variant,missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.76755074C>G, NC_000004.11:g.77676227C>G, NG_028077.1:g.324975C>G, NM_020859.4:c.4591C>G, NM_020859.3:c.4591C>G, NP_065910.3:p.Pro1531Ala

Select item 14898254112.

rs1489825411 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:76740680 (GRCh38)
4:77661833 (GRCh37)
Canonical SPDI:: NC_000004.12:76740679:A:G
Gene:: SHROOM3 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000004.12:g.76740680A>G, NC_000004.11:g.77661833A>G, NG_028077.1:g.310581A>G, NM_020859.4:c.2507A>G, NM_020859.3:c.2507A>G, NP_065910.3:p.Glu836Gly

Select item 14887727463.

rs1488772746 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:76739639 (GRCh38)
4:77660792 (GRCh37)
Canonical SPDI:: NC_000004.12:76739638:G:A
Gene:: SHROOM3 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000004.12:g.76739639G>A, NC_000004.11:g.77660792G>A, NG_028077.1:g.309540G>A, NM_020859.4:c.1466G>A, NM_020859.3:c.1466G>A, NP_065910.3:p.Gly489Asp

Select item 14883373504.

rs1488337350 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 4:76740312 (GRCh38)
4:77661465 (GRCh37)
Canonical SPDI:: NC_000004.12:76740311:G:C
Gene:: SHROOM3 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.76740312G>C, NC_000004.11:g.77661465G>C, NG_028077.1:g.310213G>C, NM_020859.4:c.2139G>C, NM_020859.3:c.2139G>C

Select item 14882292515.

rs1488229251 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:76738800 (GRCh38)
4:77659953 (GRCh37)
Canonical SPDI:: NC_000004.12:76738799:T:C
Gene:: SHROOM3 (Varview)
Functional Consequence:: synonymous_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.76738800T>C, NC_000004.11:g.77659953T>C, NG_028077.1:g.308701T>C, NM_020859.4:c.627T>C, NM_020859.3:c.627T>C

Select item 14880284646.

rs1488028464 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:76770700 (GRCh38)
4:77691853 (GRCh37)
Canonical SPDI:: NC_000004.12:76770699:C:T
Gene:: SHROOM3 (Varview), SHROOM3-AS1 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa
MAF:: T=0.000047/1 (ALFA)
T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000004.12:g.76770700C>T, NC_000004.11:g.77691853C>T, NG_028077.1:g.340601C>T, NM_020859.4:c.5424C>T, NM_020859.3:c.5424C>T

Select item 14880117697.

rs1488011769 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 4:76739797 (GRCh38)
4:77660950 (GRCh37)
Canonical SPDI:: NC_000004.12:76739796:G:C
Gene:: SHROOM3 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.76739797G>C, NC_000004.11:g.77660950G>C, NG_028077.1:g.309698G>C, NM_020859.4:c.1624G>C, NM_020859.3:c.1624G>C, NP_065910.3:p.Val542Leu

Select item 14872646568.

rs1487264656 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:76739280 (GRCh38)
4:77660433 (GRCh37)
Canonical SPDI:: NC_000004.12:76739279:G:A
Gene:: SHROOM3 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000004.12:g.76739280G>A, NC_000004.11:g.77660433G>A, NG_028077.1:g.309181G>A, NM_020859.4:c.1107G>A, NM_020859.3:c.1107G>A

Select item 14870709999.

rs1487070999 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 4:76741885 (GRCh38)
4:77663038 (GRCh37)
Canonical SPDI:: NC_000004.12:76741884:G:A,NC_000004.12:76741884:G:T
Gene:: SHROOM3 (Varview), SHROOM3-AS1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.76741885G>A, NC_000004.12:g.76741885G>T, NC_000004.11:g.77663038G>A, NC_000004.11:g.77663038G>T, NG_028077.1:g.311786G>A, NG_028077.1:g.311786G>T, NM_020859.4:c.3712G>A, NM_020859.4:c.3712G>T, NM_020859.3:c.3712G>A, NM_020859.3:c.3712G>T, NP_065910.3:p.Val1238Met, NP_065910.3:p.Val1238Leu

Select item 148684714610.

rs1486847146 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:76740773 (GRCh38)
4:77661926 (GRCh37)
Canonical SPDI:: NC_000004.12:76740772:T:C
Gene:: SHROOM3 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by cluster
MAF:: C=0.000004/1 (GnomAD_exomes)
C=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.76740773T>C, NC_000004.11:g.77661926T>C, NG_028077.1:g.310674T>C, NM_020859.4:c.2600T>C, NM_020859.3:c.2600T>C, NP_065910.3:p.Leu867Pro

Select item 148663761611.

rs1486637616 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 4:76759609 (GRCh38)
4:77680762 (GRCh37)
Canonical SPDI:: NC_000004.12:76759608:C:G
Gene:: SHROOM3 (Varview), SHROOM3-AS1 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.76759609C>G, NC_000004.11:g.77680762C>G, NG_028077.1:g.329510C>G, NM_020859.4:c.5263C>G, NM_020859.3:c.5263C>G, NP_065910.3:p.Pro1755Ala

Select item 148653927812.

rs1486539278 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 4:76756620 (GRCh38)
4:77677773 (GRCh37)
Canonical SPDI:: NC_000004.12:76756619:T:A
Gene:: SHROOM3 (Varview), SHROOM3-AS1 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,synonymous_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000004.12:g.76756620T>A, NC_000004.11:g.77677773T>A, NG_028077.1:g.326521T>A, NM_020859.4:c.4881T>A, NM_020859.3:c.4881T>A

Select item 148621257713.

rs1486212577 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:76759572 (GRCh38)
4:77680725 (GRCh37)
Canonical SPDI:: NC_000004.12:76759571:G:A
Gene:: SHROOM3 (Varview), SHROOM3-AS1 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
A=0.000011/3 (TOPMED)
HGVS:: NC_000004.12:g.76759572G>A, NC_000004.11:g.77680725G>A, NG_028077.1:g.329473G>A, NM_020859.4:c.5226G>A, NM_020859.3:c.5226G>A, NP_065910.3:p.Met1742Ile

Select item 148612953114.

rs1486129531 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:76739246 (GRCh38)
4:77660399 (GRCh37)
Canonical SPDI:: NC_000004.12:76739245:C:T
Gene:: SHROOM3 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.76739246C>T, NC_000004.11:g.77660399C>T, NG_028077.1:g.309147C>T, NM_020859.4:c.1073C>T, NM_020859.3:c.1073C>T, NP_065910.3:p.Pro358Leu

Select item 148579208815.

rs1485792088 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:76555748 (GRCh38)
4:77476901 (GRCh37)
Canonical SPDI:: NC_000004.12:76555747:G:A
Gene:: SHROOM3 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000004.12:g.76555748G>A, NC_000004.11:g.77476901G>A, NG_028077.1:g.125649G>A, NM_020859.4:c.308G>A, NM_020859.3:c.308G>A, NP_065910.3:p.Arg103Lys

Select item 148531967316.

rs1485319673 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:76779058 (GRCh38)
4:77700211 (GRCh37)
Canonical SPDI:: NC_000004.12:76779057:T:C
Gene:: SHROOM3 (Varview), SHROOM3-AS1 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,missense_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (GnomAD_exomes)
C=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.76779058T>C, NC_000004.11:g.77700211T>C, NG_028077.1:g.348959T>C, NM_020859.4:c.5872T>C, NM_020859.3:c.5872T>C, NP_065910.3:p.Ser1958Pro

Select item 148485327217.

rs1484853272 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 4:76741465 (GRCh38)
4:77662618 (GRCh37)
Canonical SPDI:: NC_000004.12:76741464:C:G
Gene:: SHROOM3 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.76741465C>G, NC_000004.11:g.77662618C>G, NG_028077.1:g.311366C>G, NM_020859.4:c.3292C>G, NM_020859.3:c.3292C>G, NP_065910.3:p.Pro1098Ala

Select item 148366269118.

rs1483662691 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 4:76740255 (GRCh38)
4:77661408 (GRCh37)
Canonical SPDI:: NC_000004.12:76740254:C:A
Gene:: SHROOM3 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000056/2 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.76740255C>A, NC_000004.11:g.77661408C>A, NG_028077.1:g.310156C>A, NM_020859.4:c.2082C>A, NM_020859.3:c.2082C>A

Select item 148358372919.

rs1483583729 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:76741729 (GRCh38)
4:77662882 (GRCh37)
Canonical SPDI:: NC_000004.12:76741728:G:A
Gene:: SHROOM3 (Varview), SHROOM3-AS1 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
A=0.000023/6 (TOPMED)
HGVS:: NC_000004.12:g.76741729G>A, NC_000004.11:g.77662882G>A, NG_028077.1:g.311630G>A, NM_020859.4:c.3556G>A, NM_020859.3:c.3556G>A, NP_065910.3:p.Gly1186Arg

Select item 148337245120.

rs1483372451 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 4:76749027 (GRCh38)
4:77670180 (GRCh37)
Canonical SPDI:: NC_000004.12:76749026:T:G
Gene:: SHROOM3 (Varview), SHROOM3-AS1 (Varview)
Functional Consequence:: intron_variant,coding_sequence_variant,missense_variant
Validated:: by frequency
MAF:: G=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000004.12:g.76749027T>G, NC_000004.11:g.77670180T>G, NG_028077.1:g.318928T>G, NM_020859.4:c.3764T>G, NM_020859.3:c.3764T>G, NP_065910.3:p.Leu1255Trp

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