SNP Links for Protein (Select 4507593) - SNP

Links from Protein

Items: 1 to 20 of 263

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Select item 14890368191.

rs1489036819 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:172523277 (GRCh38)
3:172241067 (GRCh37)
Canonical SPDI:: NC_000003.12:172523276:C:T
Gene:: TNFSF10 (Varview)
Functional Consequence:: coding_sequence_variant,non_coding_transcript_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000003.12:g.172523277C>T, NC_000003.11:g.172241067C>T, NM_003810.4:c.108G>A, NM_003810.3:c.108G>A, NR_033994.2:n.154G>A, NR_033994.1:n.231G>A, NM_001190942.2:c.108G>A, NM_001190942.1:c.108G>A, NM_001190943.2:c.108G>A, NM_001190943.1:c.108G>A

Select item 14841705612.

rs1484170561 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 3:172509243 (GRCh38)
3:172227033 (GRCh37)
Canonical SPDI:: NC_000003.12:172509242:C:A,NC_000003.12:172509242:C:T
Gene:: TNFSF10 (Varview)
Functional Consequence:: coding_sequence_variant,intron_variant,missense_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: A=0.000004/1 (GnomAD_exomes)
T=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.172509243C>A, NC_000003.12:g.172509243C>T, NC_000003.11:g.172227033C>A, NC_000003.11:g.172227033C>T, NM_003810.4:c.392G>T, NM_003810.4:c.392G>A, NM_003810.3:c.392G>T, NM_003810.3:c.392G>A, NR_033994.2:n.395G>T, NR_033994.2:n.395G>A, NR_033994.1:n.472G>T, NR_033994.1:n.472G>A, NP_003801.1:p.Gly131Val, NP_003801.1:p.Gly131Glu

Select item 14734282213.

rs1473428221 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 3:172523364 (GRCh38)
3:172241154 (GRCh37)
Canonical SPDI:: NC_000003.12:172523363:C:G
Gene:: TNFSF10 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.172523364C>G, NC_000003.11:g.172241154C>G, NM_003810.4:c.21G>C, NM_003810.3:c.21G>C, NR_033994.2:n.67G>C, NR_033994.1:n.144G>C, NM_001190942.2:c.21G>C, NM_001190942.1:c.21G>C, NM_001190943.2:c.21G>C, NM_001190943.1:c.21G>C, NP_003801.1:p.Gln7His, NP_001177871.1:p.Gln7His, NP_001177872.1:p.Gln7His

Select item 14723167674.

rs1472316767 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 3:172509255 (GRCh38)
3:172227045 (GRCh37)
Canonical SPDI:: NC_000003.12:172509254:G:C
Gene:: TNFSF10 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant,missense_variant,genic_downstream_transcript_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000019/5 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000003.12:g.172509255G>C, NC_000003.11:g.172227045G>C, NM_003810.4:c.380C>G, NM_003810.3:c.380C>G, NR_033994.2:n.383C>G, NR_033994.1:n.460C>G, NP_003801.1:p.Thr127Ser

Select item 14717406835.

rs1471740683 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 3:172514885 (GRCh38)
3:172232675 (GRCh37)
Canonical SPDI:: NC_000003.12:172514884:C:G,NC_000003.12:172514884:C:T
Gene:: TNFSF10 (Varview)
Functional Consequence:: non_coding_transcript_variant,missense_variant,genic_downstream_transcript_variant,coding_sequence_variant,stop_gained
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
T=0.000008/2 (TOPMED)
HGVS:: NC_000003.12:g.172514885C>G, NC_000003.12:g.172514885C>T, NC_000003.11:g.172232675C>G, NC_000003.11:g.172232675C>T, NM_003810.4:c.246G>C, NM_003810.4:c.246G>A, NM_003810.3:c.246G>C, NM_003810.3:c.246G>A, NR_033994.2:n.292G>C, NR_033994.2:n.292G>A, NR_033994.1:n.369G>C, NR_033994.1:n.369G>A, NM_001190942.2:c.246G>C, NM_001190942.2:c.246G>A, NM_001190942.1:c.246G>C, NM_001190942.1:c.246G>A, NP_003801.1:p.Trp82Cys, NP_003801.1:p.Trp82Ter, NP_001177871.1:p.Trp82Cys, NP_001177871.1:p.Trp82Ter

Select item 14656804076.

rs1465680407 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:172506790 (GRCh38)
3:172224580 (GRCh37)
Canonical SPDI:: NC_000003.12:172506789:T:C
Gene:: TNFSF10 (Varview)
Functional Consequence:: non_coding_transcript_variant,3_prime_UTR_variant,missense_variant,genic_downstream_transcript_variant,coding_sequence_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000003.12:g.172506790T>C, NC_000003.11:g.172224580T>C, NM_003810.4:c.548A>G, NM_003810.3:c.548A>G, NR_033994.2:n.551A>G, NR_033994.1:n.628A>G, NM_001190942.2:c.*94A>G, NM_001190942.1:c.*94A>G, NP_003801.1:p.Tyr183Cys

Select item 14580612727.

rs1458061272 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:172506534 (GRCh38)
3:172224324 (GRCh37)
Canonical SPDI:: NC_000003.12:172506533:C:T
Gene:: TNFSF10 (Varview)
Functional Consequence:: coding_sequence_variant,non_coding_transcript_variant,missense_variant,3_prime_UTR_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.172506534C>T, NC_000003.11:g.172224324C>T, NM_003810.4:c.804G>A, NM_003810.3:c.804G>A, NR_033994.2:n.807G>A, NR_033994.1:n.884G>A, NM_001190942.2:c.*350G>A, NM_001190942.1:c.*350G>A, NP_003801.1:p.Met268Ile

Select item 14575223108.

rs1457522310 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 3:172506548 (GRCh38)
3:172224338 (GRCh37)
Canonical SPDI:: NC_000003.12:172506547:G:C
Gene:: TNFSF10 (Varview)
Functional Consequence:: coding_sequence_variant,non_coding_transcript_variant,missense_variant,3_prime_UTR_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.172506548G>C, NC_000003.11:g.172224338G>C, NM_003810.4:c.790C>G, NM_003810.3:c.790C>G, NR_033994.2:n.793C>G, NR_033994.1:n.870C>G, NM_001190942.2:c.*336C>G, NM_001190942.1:c.*336C>G, NP_003801.1:p.His264Asp

Select item 14538836849.

rs1453883684 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:172506515 (GRCh38)
3:172224305 (GRCh37)
Canonical SPDI:: NC_000003.12:172506514:A:G
Gene:: TNFSF10 (Varview)
Functional Consequence:: coding_sequence_variant,non_coding_transcript_variant,missense_variant,3_prime_UTR_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (GnomAD_exomes)
G=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.172506515A>G, NC_000003.11:g.172224305A>G, NM_003810.4:c.823T>C, NM_003810.3:c.823T>C, NR_033994.2:n.826T>C, NR_033994.1:n.903T>C, NM_001190942.2:c.*369T>C, NM_001190942.1:c.*369T>C, NP_003801.1:p.Phe275Leu

Select item 145246569210.

rs1452465692 [Homo sapiens]

Variant type:: DELINS
Alleles:: GTGTTTT>- [Show Flanks]
Chromosome:: 3:172506739 (GRCh38)
3:172224529 (GRCh37)
Canonical SPDI:: NC_000003.12:172506735:TTTGTGTTTT:TTT
Gene:: TNFSF10 (Varview)
Functional Consequence:: frameshift_variant,3_prime_UTR_variant,coding_sequence_variant,non_coding_transcript_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: TTT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.172506739_172506745del, NC_000003.11:g.172224529_172224535del, NM_003810.4:c.596_602del, NM_003810.3:c.596_602del, NR_033994.2:n.599_605del, NR_033994.1:n.676_682del, NM_001190942.2:c.*142_*148del, NM_001190942.1:c.*142_*148del, NP_003801.1:p.Asn199fs

Select item 144821874011.

rs1448218740 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:172514988 (GRCh38)
3:172232778 (GRCh37)
Canonical SPDI:: NC_000003.12:172514987:T:C
Gene:: TNFSF10 (Varview)
Functional Consequence:: coding_sequence_variant,non_coding_transcript_variant,missense_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000003.12:g.172514988T>C, NC_000003.11:g.172232778T>C, NM_003810.4:c.143A>G, NM_003810.3:c.143A>G, NR_033994.2:n.189A>G, NR_033994.1:n.266A>G, NM_001190942.2:c.143A>G, NM_001190942.1:c.143A>G, NP_003801.1:p.Lys48Arg, NP_001177871.1:p.Lys48Arg

Select item 144783921112.

rs1447839211 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 3:172506573 (GRCh38)
3:172224363 (GRCh37)
Canonical SPDI:: NC_000003.12:172506572:T:A
Gene:: TNFSF10 (Varview)
Functional Consequence:: 3_prime_UTR_variant,missense_variant,coding_sequence_variant,non_coding_transcript_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000003.12:g.172506573T>A, NC_000003.11:g.172224363T>A, NM_003810.4:c.765A>T, NM_003810.3:c.765A>T, NR_033994.2:n.768A>T, NR_033994.1:n.845A>T, NM_001190942.2:c.*311A>T, NM_001190942.1:c.*311A>T, NP_003801.1:p.Arg255Ser

Select item 144112163413.

rs1441121634 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:172506494 (GRCh38)
3:172224284 (GRCh37)
Canonical SPDI:: NC_000003.12:172506493:A:G
Gene:: TNFSF10 (Varview)
Functional Consequence:: stop_lost,non_coding_transcript_variant,3_prime_UTR_variant,genic_downstream_transcript_variant,terminator_codon_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000003.12:g.172506494A>G, NC_000003.11:g.172224284A>G, NM_003810.4:c.844T>C, NM_003810.3:c.844T>C, NR_033994.2:n.847T>C, NR_033994.1:n.924T>C, NM_001190942.2:c.*390T>C, NM_001190942.1:c.*390T>C, NP_003801.1:p.Ter282Gln

Select item 143068401514.

rs1430684015 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:172514904 (GRCh38)
3:172232694 (GRCh37)
Canonical SPDI:: NC_000003.12:172514903:G:A
Gene:: TNFSF10 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0.000111/1 (ALFA)
A=0.000008/2 (GnomAD_exomes)
HGVS:: NC_000003.12:g.172514904G>A, NC_000003.11:g.172232694G>A, NM_003810.4:c.227C>T, NM_003810.3:c.227C>T, NR_033994.2:n.273C>T, NR_033994.1:n.350C>T, NM_001190942.2:c.227C>T, NM_001190942.1:c.227C>T, NP_003801.1:p.Pro76Leu, NP_001177871.1:p.Pro76Leu

Select item 143035466115.

rs1430354661 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:172523312 (GRCh38)
3:172241102 (GRCh37)
Canonical SPDI:: NC_000003.12:172523311:G:A
Gene:: TNFSF10 (Varview)
Functional Consequence:: missense_variant,coding_sequence_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.172523312G>A, NC_000003.11:g.172241102G>A, NM_003810.4:c.73C>T, NM_003810.3:c.73C>T, NR_033994.2:n.119C>T, NR_033994.1:n.196C>T, NM_001190942.2:c.73C>T, NM_001190942.1:c.73C>T, NM_001190943.2:c.73C>T, NM_001190943.1:c.73C>T, NP_003801.1:p.Leu25Phe, NP_001177871.1:p.Leu25Phe, NP_001177872.1:p.Leu25Phe

Select item 142969953516.

rs1429699535 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:172523343 (GRCh38)
3:172241133 (GRCh37)
Canonical SPDI:: NC_000003.12:172523342:C:T
Gene:: TNFSF10 (Varview)
Functional Consequence:: coding_sequence_variant,synonymous_variant,non_coding_transcript_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000003.12:g.172523343C>T, NC_000003.11:g.172241133C>T, NM_003810.4:c.42G>A, NM_003810.3:c.42G>A, NR_033994.2:n.88G>A, NR_033994.1:n.165G>A, NM_001190942.2:c.42G>A, NM_001190942.1:c.42G>A, NM_001190943.2:c.42G>A, NM_001190943.1:c.42G>A

Select item 142484510617.

rs1424845106 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 3:172509248 (GRCh38)
3:172227038 (GRCh37)
Canonical SPDI:: NC_000003.12:172509247:G:A,NC_000003.12:172509247:G:T
Gene:: TNFSF10 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant,coding_sequence_variant,synonymous_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000003.12:g.172509248G>A, NC_000003.12:g.172509248G>T, NC_000003.11:g.172227038G>A, NC_000003.11:g.172227038G>T, NM_003810.4:c.387C>T, NM_003810.4:c.387C>A, NM_003810.3:c.387C>T, NM_003810.3:c.387C>A, NR_033994.2:n.390C>T, NR_033994.2:n.390C>A, NR_033994.1:n.467C>T, NR_033994.1:n.467C>A

Select item 141396628618.

rs1413966286 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:172514982 (GRCh38)
3:172232772 (GRCh37)
Canonical SPDI:: NC_000003.12:172514981:G:A
Gene:: TNFSF10 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,missense_variant,non_coding_transcript_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.00026/6 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
A=0.000024/6 (GnomAD_exomes)
HGVS:: NC_000003.12:g.172514982G>A, NC_000003.11:g.172232772G>A, NM_003810.4:c.149C>T, NM_003810.3:c.149C>T, NR_033994.2:n.195C>T, NR_033994.1:n.272C>T, NM_001190942.2:c.149C>T, NM_001190942.1:c.149C>T, NP_003801.1:p.Ser50Phe, NP_001177871.1:p.Ser50Phe

Select item 141026501219.

rs1410265012 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>- [Show Flanks]
Chromosome:: 3:172506567 (GRCh38)
3:172224357 (GRCh37)
Canonical SPDI:: NC_000003.12:172506566:AAAAA:AAAA
Gene:: TNFSF10 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,frameshift_variant,coding_sequence_variant,non_coding_transcript_variant,3_prime_UTR_variant
Validated:: by frequency
MAF:: -=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000003.12:g.172506571del, NC_000003.11:g.172224361del, NM_003810.4:c.771del, NM_003810.3:c.771del, NR_033994.2:n.774del, NR_033994.1:n.851del, NM_001190942.2:c.*317del, NM_001190942.1:c.*317del, NP_003801.1:p.Phe257fs

Select item 140041811320.

rs1400418113 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:172514976 (GRCh38)
3:172232766 (GRCh37)
Canonical SPDI:: NC_000003.12:172514975:C:T
Gene:: TNFSF10 (Varview)
Functional Consequence:: non_coding_transcript_variant,coding_sequence_variant,missense_variant,genic_downstream_transcript_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000003.12:g.172514976C>T, NC_000003.11:g.172232766C>T, NM_003810.4:c.155G>A, NM_003810.3:c.155G>A, NR_033994.2:n.201G>A, NR_033994.1:n.278G>A, NM_001190942.2:c.155G>A, NM_001190942.1:c.155G>A, NP_003801.1:p.Ser52Asn, NP_001177871.1:p.Ser52Asn

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