Name: rs1177291795
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1177291795

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr15:41560389-41560392 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delGT / dupGT / dupGTGT / ins(GT)₃…
delGT / dupGT / dupGTGT / ins(GT)₃ / ins(GT)₄ / ins(GT)₅ / ins(GT)₆ / ins(GT)₇ / ins(GT)₈ / ins(GT)₉ / ins(GT)₁₀ / ins(GT)₁₁ / insTT(GT)₅ / insTT(GT)₈ / insTT(GT)₉
Variation Type: Indel Insertion and Deletion
Frequency: ins(GT)₇=0.00012 (2/16742, 8.3KJPN)
ins(GT)₆=0.00055 (9/16284, ALFA)
ins(GT)₈=0.00055 (9/16284, ALFA)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: TYRO3 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	HTRZ	HWEP
Total	Global	16284	GTGT=0.99785	GT=0.00000, GTGTGT=0.00000, GTGTGTGT=0.00000, GTGTGTGTGT=0.00049, GTGTGTGTGTGTGT=0.00018, GTGTGTGTGTGTGTGT=0.00055, GTGTGTGTGTGTGTGTGTGT=0.00055, GTGTGTGTGTGT=0.00018, GTGTGTGTGTGTGTGTGTGTGT=0.00018, GTGTGTGTGTGTGTGTGT=0.00000	0.998891	0.001109	0
European	Sub	12072	GTGT=0.99710	GT=0.00000, GTGTGT=0.00000, GTGTGTGT=0.00000, GTGTGTGTGT=0.00066, GTGTGTGTGTGTGT=0.00025, GTGTGTGTGTGTGTGT=0.00075, GTGTGTGTGTGTGTGTGTGT=0.00075, GTGTGTGTGTGT=0.00025, GTGTGTGTGTGTGTGTGTGTGT=0.00025, GTGTGTGTGTGTGTGTGT=0.00000	0.998502	0.001498	0
African	Sub	2780	GTGT=1.0000	GT=0.0000, GTGTGT=0.0000, GTGTGTGT=0.0000, GTGTGTGTGT=0.0000, GTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGT=0.0000	1.0	0.0	N/A
African Others	Sub	104	GTGT=1.000	GT=0.000, GTGTGT=0.000, GTGTGTGT=0.000, GTGTGTGTGT=0.000, GTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGT=0.000	1.0	0.0	N/A
African American	Sub	2676	GTGT=1.0000	GT=0.0000, GTGTGT=0.0000, GTGTGTGT=0.0000, GTGTGTGTGT=0.0000, GTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGTGTGT=0.0000, GTGTGTGTGTGTGTGTGT=0.0000	1.0	0.0	N/A
Asian	Sub	108	GTGT=1.000	GT=0.000, GTGTGT=0.000, GTGTGTGT=0.000, GTGTGTGTGT=0.000, GTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGT=0.000	1.0	0.0	N/A
East Asian	Sub	84	GTGT=1.00	GT=0.00, GTGTGT=0.00, GTGTGTGT=0.00, GTGTGTGTGT=0.00, GTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGT=0.00	1.0	0.0	N/A
Other Asian	Sub	24	GTGT=1.00	GT=0.00, GTGTGT=0.00, GTGTGTGT=0.00, GTGTGTGTGT=0.00, GTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGT=0.00	1.0	0.0	N/A
Latin American 1	Sub	146	GTGT=1.000	GT=0.000, GTGTGT=0.000, GTGTGTGT=0.000, GTGTGTGTGT=0.000, GTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGT=0.000	1.0	0.0	N/A
Latin American 2	Sub	606	GTGT=1.000	GT=0.000, GTGTGT=0.000, GTGTGTGT=0.000, GTGTGTGTGT=0.000, GTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGT=0.000	1.0	0.0	N/A
South Asian	Sub	94	GTGT=1.00	GT=0.00, GTGTGT=0.00, GTGTGTGT=0.00, GTGTGTGTGT=0.00, GTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGTGTGT=0.00, GTGTGTGTGTGTGTGTGT=0.00	1.0	0.0	N/A
Other	Sub	478	GTGT=1.000	GT=0.000, GTGTGT=0.000, GTGTGTGT=0.000, GTGTGTGTGT=0.000, GTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGTGTGT=0.000, GTGTGTGTGTGTGTGTGT=0.000	1.0	0.0	N/A

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
8.3KJPN	JAPANESE	Study-wide	16742	- No frequency provided	ins(GT)₇=0.00012
Allele Frequency Aggregator	Total	Global	16284	GTGT=0.99785	delGT=0.00000, dupGT=0.00000, dupGTGT=0.00000, ins(GT)₃=0.00049, ins(GT)₄=0.00018, ins(GT)₅=0.00018, ins(GT)₆=0.00055, ins(GT)₇=0.00000, ins(GT)₈=0.00055, ins(GT)₉=0.00018
Allele Frequency Aggregator	European	Sub	12072	GTGT=0.99710	delGT=0.00000, dupGT=0.00000, dupGTGT=0.00000, ins(GT)₃=0.00066, ins(GT)₄=0.00025, ins(GT)₅=0.00025, ins(GT)₆=0.00075, ins(GT)₇=0.00000, ins(GT)₈=0.00075, ins(GT)₉=0.00025
Allele Frequency Aggregator	African	Sub	2780	GTGT=1.0000	delGT=0.0000, dupGT=0.0000, dupGTGT=0.0000, ins(GT)₃=0.0000, ins(GT)₄=0.0000, ins(GT)₅=0.0000, ins(GT)₆=0.0000, ins(GT)₇=0.0000, ins(GT)₈=0.0000, ins(GT)₉=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	606	GTGT=1.000	delGT=0.000, dupGT=0.000, dupGTGT=0.000, ins(GT)₃=0.000, ins(GT)₄=0.000, ins(GT)₅=0.000, ins(GT)₆=0.000, ins(GT)₇=0.000, ins(GT)₈=0.000, ins(GT)₉=0.000
Allele Frequency Aggregator	Other	Sub	478	GTGT=1.000	delGT=0.000, dupGT=0.000, dupGTGT=0.000, ins(GT)₃=0.000, ins(GT)₄=0.000, ins(GT)₅=0.000, ins(GT)₆=0.000, ins(GT)₇=0.000, ins(GT)₈=0.000, ins(GT)₉=0.000
Allele Frequency Aggregator	Latin American 1	Sub	146	GTGT=1.000	delGT=0.000, dupGT=0.000, dupGTGT=0.000, ins(GT)₃=0.000, ins(GT)₄=0.000, ins(GT)₅=0.000, ins(GT)₆=0.000, ins(GT)₇=0.000, ins(GT)₈=0.000, ins(GT)₉=0.000
Allele Frequency Aggregator	Asian	Sub	108	GTGT=1.000	delGT=0.000, dupGT=0.000, dupGTGT=0.000, ins(GT)₃=0.000, ins(GT)₄=0.000, ins(GT)₅=0.000, ins(GT)₆=0.000, ins(GT)₇=0.000, ins(GT)₈=0.000, ins(GT)₉=0.000
Allele Frequency Aggregator	South Asian	Sub	94	GTGT=1.00	delGT=0.00, dupGT=0.00, dupGTGT=0.00, ins(GT)₃=0.00, ins(GT)₄=0.00, ins(GT)₅=0.00, ins(GT)₆=0.00, ins(GT)₇=0.00, ins(GT)₈=0.00, ins(GT)₉=0.00

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 15	NC_000015.10:g.41560389GT[1]
GRCh38.p14 chr 15	NC_000015.10:g.41560389GT[3]
GRCh38.p14 chr 15	NC_000015.10:g.41560389GT[4]
GRCh38.p14 chr 15	NC_000015.10:g.41560389GT[5]
GRCh38.p14 chr 15	NC_000015.10:g.41560389GT[6]
GRCh38.p14 chr 15	NC_000015.10:g.41560389GT[7]
GRCh38.p14 chr 15	NC_000015.10:g.41560389GT[8]
GRCh38.p14 chr 15	NC_000015.10:g.41560389GT[9]
GRCh38.p14 chr 15	NC_000015.10:g.41560389GT[10]
GRCh38.p14 chr 15	NC_000015.10:g.41560389GT[11]
GRCh38.p14 chr 15	NC_000015.10:g.41560389GT[12]
GRCh38.p14 chr 15	NC_000015.10:g.41560389GT[13]
GRCh38.p14 chr 15	NC_000015.10:g.41560389_41560392GT[2]TTGTGTGTGTGT[1]
GRCh38.p14 chr 15	NC_000015.10:g.41560389_41560392GT[2]TTGTGTGTGTGTGTGTGT[1]
GRCh38.p14 chr 15	NC_000015.10:g.41560389_41560392GT[2]TTGTGTGTGTGTGTGTGTGT[1]
GRCh37.p13 chr 15	NC_000015.9:g.41852587GT[1]
GRCh37.p13 chr 15	NC_000015.9:g.41852587GT[3]
GRCh37.p13 chr 15	NC_000015.9:g.41852587GT[4]
GRCh37.p13 chr 15	NC_000015.9:g.41852587GT[5]
GRCh37.p13 chr 15	NC_000015.9:g.41852587GT[6]
GRCh37.p13 chr 15	NC_000015.9:g.41852587GT[7]
GRCh37.p13 chr 15	NC_000015.9:g.41852587GT[8]
GRCh37.p13 chr 15	NC_000015.9:g.41852587GT[9]
GRCh37.p13 chr 15	NC_000015.9:g.41852587GT[10]
GRCh37.p13 chr 15	NC_000015.9:g.41852587GT[11]
GRCh37.p13 chr 15	NC_000015.9:g.41852587GT[12]
GRCh37.p13 chr 15	NC_000015.9:g.41852587GT[13]
GRCh37.p13 chr 15	NC_000015.9:g.41852587_41852590GT[2]TTGTGTGTGTGT[1]
GRCh37.p13 chr 15	NC_000015.9:g.41852587_41852590GT[2]TTGTGTGTGTGTGTGTGT[1]
GRCh37.p13 chr 15	NC_000015.9:g.41852587_41852590GT[2]TTGTGTGTGTGTGTGTGTGT[1]
TYRO3 RefSeqGene	NG_033013.1:g.6368GT[1]
TYRO3 RefSeqGene	NG_033013.1:g.6368GT[3]
TYRO3 RefSeqGene	NG_033013.1:g.6368GT[4]
TYRO3 RefSeqGene	NG_033013.1:g.6368GT[5]
TYRO3 RefSeqGene	NG_033013.1:g.6368GT[6]
TYRO3 RefSeqGene	NG_033013.1:g.6368GT[7]
TYRO3 RefSeqGene	NG_033013.1:g.6368GT[8]
TYRO3 RefSeqGene	NG_033013.1:g.6368GT[9]
TYRO3 RefSeqGene	NG_033013.1:g.6368GT[10]
TYRO3 RefSeqGene	NG_033013.1:g.6368GT[11]
TYRO3 RefSeqGene	NG_033013.1:g.6368GT[12]
TYRO3 RefSeqGene	NG_033013.1:g.6368GT[13]
TYRO3 RefSeqGene	NG_033013.1:g.6368_6371GT[2]TTGTGTGTGTGT[1]
TYRO3 RefSeqGene	NG_033013.1:g.6368_6371GT[2]TTGTGTGTGTGTGTGTGT[1]
TYRO3 RefSeqGene	NG_033013.1:g.6368_6371GT[2]TTGTGTGTGTGTGTGTGTGT[1]

Gene: TYRO3, TYRO3 protein tyrosine kinase (plus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
TYRO3 transcript variant 2	NM_001330264.2:c.-12+95_-… NM_001330264.2:c.-12+95_-12+96del	N/A	Intron Variant
TYRO3 transcript variant 1	NM_006293.4:c.125-736_125… NM_006293.4:c.125-736_125-735del	N/A	Intron Variant
TYRO3 transcript variant X1	XM_017022543.3:c.125-736_… XM_017022543.3:c.125-736_125-735del	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	GTGT=	delGT	dupGT	dupGTGT	ins(GT)₃	ins(GT)₄	ins(GT)₅	ins(GT)₆	ins(GT)₇	ins(GT)₈	ins(GT)₉	ins(GT)₁₀	ins(GT)₁₁	insTT(GT)₅	insTT(GT)₈	insTT(GT)₉
GRCh38.p14 chr 15	NC_000015.10:g.41560389_41560392=	NC_000015.10:g.41560389GT[1]	NC_000015.10:g.41560389GT[3]	NC_000015.10:g.41560389GT[4]	NC_000015.10:g.41560389GT[5]	NC_000015.10:g.41560389GT[6]	NC_000015.10:g.41560389GT[7]	NC_000015.10:g.41560389GT[8]	NC_000015.10:g.41560389GT[9]	NC_000015.10:g.41560389GT[10]	NC_000015.10:g.41560389GT[11]	NC_000015.10:g.41560389GT[12]	NC_000015.10:g.41560389GT[13]	NC_000015.10:g.41560389_41560392GT[2]TTGTGTGTGTGT[1]	NC_000015.10:g.41560389_41560392GT[2]TTGTGTGTGTGTGTGTGT[1]	NC_000015.10:g.41560389_41560392GT[2]TTGTGTGTGTGTGTGTGTGT[1]
GRCh37.p13 chr 15	NC_000015.9:g.41852587_41852590=	NC_000015.9:g.41852587GT[1]	NC_000015.9:g.41852587GT[3]	NC_000015.9:g.41852587GT[4]	NC_000015.9:g.41852587GT[5]	NC_000015.9:g.41852587GT[6]	NC_000015.9:g.41852587GT[7]	NC_000015.9:g.41852587GT[8]	NC_000015.9:g.41852587GT[9]	NC_000015.9:g.41852587GT[10]	NC_000015.9:g.41852587GT[11]	NC_000015.9:g.41852587GT[12]	NC_000015.9:g.41852587GT[13]	NC_000015.9:g.41852587_41852590GT[2]TTGTGTGTGTGT[1]	NC_000015.9:g.41852587_41852590GT[2]TTGTGTGTGTGTGTGTGT[1]	NC_000015.9:g.41852587_41852590GT[2]TTGTGTGTGTGTGTGTGTGT[1]
TYRO3 RefSeqGene	NG_033013.1:g.6368_6371=	NG_033013.1:g.6368GT[1]	NG_033013.1:g.6368GT[3]	NG_033013.1:g.6368GT[4]	NG_033013.1:g.6368GT[5]	NG_033013.1:g.6368GT[6]	NG_033013.1:g.6368GT[7]	NG_033013.1:g.6368GT[8]	NG_033013.1:g.6368GT[9]	NG_033013.1:g.6368GT[10]	NG_033013.1:g.6368GT[11]	NG_033013.1:g.6368GT[12]	NG_033013.1:g.6368GT[13]	NG_033013.1:g.6368_6371GT[2]TTGTGTGTGTGT[1]	NG_033013.1:g.6368_6371GT[2]TTGTGTGTGTGTGTGTGT[1]	NG_033013.1:g.6368_6371GT[2]TTGTGTGTGTGTGTGTGTGT[1]
TYRO3 transcript variant 2	NM_001330264.2:c.-12+93=	NM_001330264.2:c.-12+95_-12+96del	NM_001330264.2:c.-12+93GT[3]	NM_001330264.2:c.-12+93GT[4]	NM_001330264.2:c.-12+93GT[5]	NM_001330264.2:c.-12+93GT[6]	NM_001330264.2:c.-12+93GT[7]	NM_001330264.2:c.-12+93GT[8]	NM_001330264.2:c.-12+93GT[9]	NM_001330264.2:c.-12+93GT[10]	NM_001330264.2:c.-12+93GT[11]	NM_001330264.2:c.-12+93GT[12]	NM_001330264.2:c.-12+93GT[13]	NM_001330264.2:c.-12+96_-12+97insTTGTGTGTGTGT	NM_001330264.2:c.-12+96_-12+97insTTGTGTGTGTGTGTGTGT	NM_001330264.2:c.-12+96_-12+97insTTGTGTGTGTGTGTGTGTGT
TYRO3 transcript variant 1	NM_006293.3:c.125-738=	NM_006293.3:c.125-736_125-735del	NM_006293.3:c.125-738GT[3]	NM_006293.3:c.125-738GT[4]	NM_006293.3:c.125-738GT[5]	NM_006293.3:c.125-738GT[6]	NM_006293.3:c.125-738GT[7]	NM_006293.3:c.125-738GT[8]	NM_006293.3:c.125-738GT[9]	NM_006293.3:c.125-738GT[10]	NM_006293.3:c.125-738GT[11]	NM_006293.3:c.125-738GT[12]	NM_006293.3:c.125-738GT[13]	NM_006293.3:c.125-735_125-734insTTGTGTGTGTGT	NM_006293.3:c.125-735_125-734insTTGTGTGTGTGTGTGTGT	NM_006293.3:c.125-735_125-734insTTGTGTGTGTGTGTGTGTGT
TYRO3 transcript variant 1	NM_006293.4:c.125-738=	NM_006293.4:c.125-736_125-735del	NM_006293.4:c.125-738GT[3]	NM_006293.4:c.125-738GT[4]	NM_006293.4:c.125-738GT[5]	NM_006293.4:c.125-738GT[6]	NM_006293.4:c.125-738GT[7]	NM_006293.4:c.125-738GT[8]	NM_006293.4:c.125-738GT[9]	NM_006293.4:c.125-738GT[10]	NM_006293.4:c.125-738GT[11]	NM_006293.4:c.125-738GT[12]	NM_006293.4:c.125-738GT[13]	NM_006293.4:c.125-735_125-734insTTGTGTGTGTGT	NM_006293.4:c.125-735_125-734insTTGTGTGTGTGTGTGTGT	NM_006293.4:c.125-735_125-734insTTGTGTGTGTGTGTGTGTGT
TYRO3 transcript variant X1	XM_017022543.3:c.125-738=	XM_017022543.3:c.125-736_125-735del	XM_017022543.3:c.125-738GT[3]	XM_017022543.3:c.125-738GT[4]	XM_017022543.3:c.125-738GT[5]	XM_017022543.3:c.125-738GT[6]	XM_017022543.3:c.125-738GT[7]	XM_017022543.3:c.125-738GT[8]	XM_017022543.3:c.125-738GT[9]	XM_017022543.3:c.125-738GT[10]	XM_017022543.3:c.125-738GT[11]	XM_017022543.3:c.125-738GT[12]	XM_017022543.3:c.125-738GT[13]	XM_017022543.3:c.125-735_125-734insTTGTGTGTGTGT	XM_017022543.3:c.125-735_125-734insTTGTGTGTGTGTGTGTGT	XM_017022543.3:c.125-735_125-734insTTGTGTGTGTGTGTGTGTGT

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

20 SubSNP, 21 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	KOGIC	ss3975999210	Apr 27, 2020 (154)
2	KOGIC	ss3975999211	Apr 27, 2020 (154)
3	GNOMAD	ss4287513866	Apr 27, 2021 (155)
4	GNOMAD	ss4287513867	Apr 27, 2021 (155)
5	GNOMAD	ss4287513868	Apr 27, 2021 (155)
6	GNOMAD	ss4287513869	Apr 27, 2021 (155)
7	GNOMAD	ss4287513870	Apr 27, 2021 (155)
8	GNOMAD	ss4287513871	Apr 27, 2021 (155)
9	GNOMAD	ss4287513872	Apr 27, 2021 (155)
10	GNOMAD	ss4287513873	Apr 27, 2021 (155)
11	GNOMAD	ss4287513874	Apr 27, 2021 (155)
12	GNOMAD	ss4287513875	Apr 27, 2021 (155)
13	GNOMAD	ss4287513876	Apr 27, 2021 (155)
14	GNOMAD	ss4287513877	Apr 27, 2021 (155)
15	GNOMAD	ss4287513878	Apr 27, 2021 (155)
16	TOMMO_GENOMICS	ss5215858855	Apr 27, 2021 (155)
17	TOMMO_GENOMICS	ss5769564411	Oct 16, 2022 (156)
18	TOMMO_GENOMICS	ss5769564412	Oct 16, 2022 (156)
19	TOMMO_GENOMICS	ss5769564413	Oct 16, 2022 (156)
20	TOMMO_GENOMICS	ss5769564414	Oct 16, 2022 (156)
21	gnomAD - Genomes Submission ignored due to conflicting rows: Row 466957722 (NC_000015.10:41560388::GT 135/66626) Row 466957723 (NC_000015.10:41560388::GTGT 198/66590) Row 466957724 (NC_000015.10:41560388::GTGTGT 41/66646)...	-	Apr 27, 2021 (155)
22	gnomAD - Genomes Submission ignored due to conflicting rows: Row 466957722 (NC_000015.10:41560388::GT 135/66626) Row 466957723 (NC_000015.10:41560388::GTGT 198/66590) Row 466957724 (NC_000015.10:41560388::GTGTGT 41/66646)...	-	Apr 27, 2021 (155)
23	gnomAD - Genomes Submission ignored due to conflicting rows: Row 466957722 (NC_000015.10:41560388::GT 135/66626) Row 466957723 (NC_000015.10:41560388::GTGT 198/66590) Row 466957724 (NC_000015.10:41560388::GTGTGT 41/66646)...	-	Apr 27, 2021 (155)
24	gnomAD - Genomes Submission ignored due to conflicting rows: Row 466957722 (NC_000015.10:41560388::GT 135/66626) Row 466957723 (NC_000015.10:41560388::GTGT 198/66590) Row 466957724 (NC_000015.10:41560388::GTGTGT 41/66646)...	-	Apr 27, 2021 (155)
25	gnomAD - Genomes Submission ignored due to conflicting rows: Row 466957722 (NC_000015.10:41560388::GT 135/66626) Row 466957723 (NC_000015.10:41560388::GTGT 198/66590) Row 466957724 (NC_000015.10:41560388::GTGTGT 41/66646)...	-	Apr 27, 2021 (155)
26	gnomAD - Genomes Submission ignored due to conflicting rows: Row 466957722 (NC_000015.10:41560388::GT 135/66626) Row 466957723 (NC_000015.10:41560388::GTGT 198/66590) Row 466957724 (NC_000015.10:41560388::GTGTGT 41/66646)...	-	Apr 27, 2021 (155)
27	gnomAD - Genomes Submission ignored due to conflicting rows: Row 466957722 (NC_000015.10:41560388::GT 135/66626) Row 466957723 (NC_000015.10:41560388::GTGT 198/66590) Row 466957724 (NC_000015.10:41560388::GTGTGT 41/66646)...	-	Apr 27, 2021 (155)
28	gnomAD - Genomes Submission ignored due to conflicting rows: Row 466957722 (NC_000015.10:41560388::GT 135/66626) Row 466957723 (NC_000015.10:41560388::GTGT 198/66590) Row 466957724 (NC_000015.10:41560388::GTGTGT 41/66646)...	-	Apr 27, 2021 (155)
29	gnomAD - Genomes Submission ignored due to conflicting rows: Row 466957722 (NC_000015.10:41560388::GT 135/66626) Row 466957723 (NC_000015.10:41560388::GTGT 198/66590) Row 466957724 (NC_000015.10:41560388::GTGTGT 41/66646)...	-	Apr 27, 2021 (155)
30	gnomAD - Genomes Submission ignored due to conflicting rows: Row 466957722 (NC_000015.10:41560388::GT 135/66626) Row 466957723 (NC_000015.10:41560388::GTGT 198/66590) Row 466957724 (NC_000015.10:41560388::GTGTGT 41/66646)...	-	Apr 27, 2021 (155)
31	gnomAD - Genomes Submission ignored due to conflicting rows: Row 466957722 (NC_000015.10:41560388::GT 135/66626) Row 466957723 (NC_000015.10:41560388::GTGT 198/66590) Row 466957724 (NC_000015.10:41560388::GTGTGT 41/66646)...	-	Apr 27, 2021 (155)
32	gnomAD - Genomes Submission ignored due to conflicting rows: Row 466957722 (NC_000015.10:41560388::GT 135/66626) Row 466957723 (NC_000015.10:41560388::GTGT 198/66590) Row 466957724 (NC_000015.10:41560388::GTGTGT 41/66646)...	-	Apr 27, 2021 (155)
33	gnomAD - Genomes Submission ignored due to conflicting rows: Row 466957722 (NC_000015.10:41560388::GT 135/66626) Row 466957723 (NC_000015.10:41560388::GTGT 198/66590) Row 466957724 (NC_000015.10:41560388::GTGTGT 41/66646)...	-	Apr 27, 2021 (155)
34	Korean Genome Project Submission ignored due to conflicting rows: Row 32377211 (NC_000015.10:41560388::GT 1/1832) Row 32377212 (NC_000015.10:41560388::GTGT 2/1832)	-	Apr 27, 2020 (154)
35	Korean Genome Project Submission ignored due to conflicting rows: Row 32377211 (NC_000015.10:41560388::GT 1/1832) Row 32377212 (NC_000015.10:41560388::GTGT 2/1832)	-	Apr 27, 2020 (154)
36	8.3KJPN	NC_000015.9 - 41852587	Apr 27, 2021 (155)
37	14KJPN Submission ignored due to conflicting rows: Row 103401515 (NC_000015.10:41560388::GTGTTTGTGTGT 3/28258) Row 103401516 (NC_000015.10:41560388::GTGTGTGTGTGTGT 2/28258) Row 103401517 (NC_000015.10:41560388::GTGTGTGTGTGTGTGTGT 1/28258)...	-	Oct 16, 2022 (156)
38	14KJPN Submission ignored due to conflicting rows: Row 103401515 (NC_000015.10:41560388::GTGTTTGTGTGT 3/28258) Row 103401516 (NC_000015.10:41560388::GTGTGTGTGTGTGT 2/28258) Row 103401517 (NC_000015.10:41560388::GTGTGTGTGTGTGTGTGT 1/28258)...	-	Oct 16, 2022 (156)
39	14KJPN Submission ignored due to conflicting rows: Row 103401515 (NC_000015.10:41560388::GTGTTTGTGTGT 3/28258) Row 103401516 (NC_000015.10:41560388::GTGTGTGTGTGTGT 2/28258) Row 103401517 (NC_000015.10:41560388::GTGTGTGTGTGTGTGTGT 1/28258)...	-	Oct 16, 2022 (156)
40	14KJPN Submission ignored due to conflicting rows: Row 103401515 (NC_000015.10:41560388::GTGTTTGTGTGT 3/28258) Row 103401516 (NC_000015.10:41560388::GTGTGTGTGTGTGT 2/28258) Row 103401517 (NC_000015.10:41560388::GTGTGTGTGTGTGTGTGT 1/28258)...	-	Oct 16, 2022 (156)
41	ALFA	NC_000015.10 - 41560389	Apr 27, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss4287513878	NC_000015.10:41560388:GT:	NC_000015.10:41560388:GTGT:GT	(self)
8863525558	NC_000015.10:41560388:GTGT:GT	NC_000015.10:41560388:GTGT:GT	(self)
ss3975999210, ss4287513866	NC_000015.10:41560388::GT	NC_000015.10:41560388:GTGT:GTGTGT	(self)
8863525558	NC_000015.10:41560388:GTGT:GTGTGT	NC_000015.10:41560388:GTGT:GTGTGT	(self)
ss3975999211, ss4287513867	NC_000015.10:41560388::GTGT	NC_000015.10:41560388:GTGT:GTGTGTGT	(self)
8863525558	NC_000015.10:41560388:GTGT:GTGTGTGT	NC_000015.10:41560388:GTGT:GTGTGTGT	(self)
ss4287513868	NC_000015.10:41560388::GTGTGT	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGT	(self)
8863525558	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGT	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGT	(self)
ss4287513869	NC_000015.10:41560388::GTGTGTGT	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGTGT	(self)
8863525558	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGTGT	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGTGT	(self)
ss4287513870	NC_000015.10:41560388::GTGTGTGTGT	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGTGTGT	(self)
8863525558	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGTGTGT	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGTGTGT	(self)
ss4287513871	NC_000015.10:41560388::GTGTGTGTGTGT	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGTGTGTGT	(self)
8863525558	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGTGTGTGT	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGTGTGTGT	(self)
73828162, ss5215858855	NC_000015.9:41852586::GTGTGTGTGTGT… NC_000015.9:41852586::GTGTGTGTGTGTGT	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGTGTGTGTGT	(self)
ss4287513872, ss5769564412	NC_000015.10:41560388::GTGTGTGTGTG… NC_000015.10:41560388::GTGTGTGTGTGTGT	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGTGTGTGTGT	(self)
8863525558	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGTGTGTGTGT	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGTGTGTGTGT	(self)
ss4287513873	NC_000015.10:41560388::GTGTGTGTGTG… NC_000015.10:41560388::GTGTGTGTGTGTGTGT	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGTGTGTGTGTGT	(self)
8863525558	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGTGTGTGTGTGT	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGTGTGTGTGTGT	(self)
ss4287513874, ss5769564413	NC_000015.10:41560388::GTGTGTGTGTG… NC_000015.10:41560388::GTGTGTGTGTGTGTGTGT	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGTGTGTGTGTGTGT	(self)
8863525558	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGTGTGTGTGTGTGT	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGTGTGTGTGTGTGT	(self)
ss4287513875	NC_000015.10:41560388::GTGTGTGTGTG… NC_000015.10:41560388::GTGTGTGTGTGTGTGTGTGT	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGTGTGTGTGTGTGTGT	(self)
ss4287513876	NC_000015.10:41560388::GTGTGTGTGTG… NC_000015.10:41560388::GTGTGTGTGTGTGTGTGTGTGT	NC_000015.10:41560388:GTGT:GTGTGTG… NC_000015.10:41560388:GTGT:GTGTGTGTGTGTGTGTGTGTGTGTGT	(self)
ss5769564411	NC_000015.10:41560388::GTGTTTGTGTGT	NC_000015.10:41560388:GTGT:GTGTTTG… NC_000015.10:41560388:GTGT:GTGTTTGTGTGTGTGT
ss4287513877	NC_000015.10:41560388::GTGTTTGTGTG… NC_000015.10:41560388::GTGTTTGTGTGTGTGTGT	NC_000015.10:41560388:GTGT:GTGTTTG… NC_000015.10:41560388:GTGT:GTGTTTGTGTGTGTGTGTGTGT	(self)
ss5769564414	NC_000015.10:41560388::GTGTTTGTGTG… NC_000015.10:41560388::GTGTTTGTGTGTGTGTGTGT	NC_000015.10:41560388:GTGT:GTGTTTG… NC_000015.10:41560388:GTGT:GTGTTTGTGTGTGTGTGTGTGTGT

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs1177291795

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs1177291795