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dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs1476374201

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr13:37028291 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
A>C
Variation Type
SNV Single Nucleotide Variation
Frequency
C=0.000004 (1/244598, GnomAD_exome)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
SUPT20H : Missense Variant
Publications
0 citations
Genomic View
See rs on genome
Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
gnomAD - Exomes Global Study-wide 244598 A=0.999996 C=0.000004
gnomAD - Exomes European Sub 133128 A=1.000000 C=0.000000
gnomAD - Exomes Asian Sub 46956 A=1.00000 C=0.00000
gnomAD - Exomes American Sub 32652 A=1.00000 C=0.00000
gnomAD - Exomes African Sub 16106 A=0.99994 C=0.00006
gnomAD - Exomes Ashkenazi Jewish Sub 9828 A=1.0000 C=0.0000
gnomAD - Exomes Other Sub 5928 A=1.0000 C=0.0000
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 13 NC_000013.11:g.37028291A>C
GRCh37.p13 chr 13 NC_000013.10:g.37602428A>C
Gene: SUPT20H, SPT20 homolog, SAGA complex component (minus strand)
Molecule type Change Amino acid[Codon] SO Term
SUPT20H transcript variant 1 NM_001014286.3:c.1008T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform a NP_001014308.2:p.Asp336Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant 4 NM_001278481.2:c.1011T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform b NP_001265410.1:p.Asp337Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant 5 NM_001278482.2:c.1011T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform b NP_001265411.1:p.Asp337Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant 3 NM_001278480.2:c.1008T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform c NP_001265409.1:p.Asp336Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant 2 NM_017569.4:c.1011T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform b NP_060039.1:p.Asp337Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X1 XM_005266447.3:c.1011T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X1 XP_005266504.1:p.Asp337Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X2 XM_005266449.5:c.1011T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X1 XP_005266506.1:p.Asp337Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X3 XM_005266451.5:c.1008T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X2 XP_005266508.1:p.Asp336Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X4 XM_047430444.1:c.1008T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X2 XP_047286400.1:p.Asp336Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X5 XM_005266454.5:c.975T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X3 XP_005266511.1:p.Asp325Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X6 XM_005266456.5:c.975T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X3 XP_005266513.1:p.Asp325Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X7 XM_005266455.3:c.1011T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X4 XP_005266512.1:p.Asp337Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X8 XM_005266457.5:c.972T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X5 XP_005266514.1:p.Asp324Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X9 XM_017020653.3:c.1008T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X6 XP_016876142.1:p.Asp336Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X10 XM_005266458.5:c.972T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X5 XP_005266515.1:p.Asp324Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X11 XM_047430445.1:c.975T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X7 XP_047286401.1:p.Asp325Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X12 XM_047430447.1:c.972T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X8 XP_047286403.1:p.Asp324Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X13 XM_047430448.1:c.972T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X8 XP_047286404.1:p.Asp324Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X14 XM_005266460.3:c.1011T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X9 XP_005266517.1:p.Asp337Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X15 XM_047430449.1:c.1008T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X10 XP_047286405.1:p.Asp336Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X16 XM_047430450.1:c.975T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X11 XP_047286406.1:p.Asp325Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X17 XM_005266461.4:c.1011T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X12 XP_005266518.1:p.Asp337Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X18 XM_047430451.1:c.972T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X13 XP_047286407.1:p.Asp324Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X19 XM_047430452.1:c.1008T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X14 XP_047286408.1:p.Asp336Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X20 XM_047430453.1:c.975T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X15 XP_047286409.1:p.Asp325Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X21 XM_047430454.1:c.972T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X16 XP_047286410.1:p.Asp324Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X22 XM_005266462.5:c.1011T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X17 XP_005266519.1:p.Asp337Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X23 XM_047430456.1:c.1011T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X17 XP_047286412.1:p.Asp337Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X24 XM_047430457.1:c.1008T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X18 XP_047286413.1:p.Asp336Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X25 XM_017020654.2:c.975T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X19 XP_016876143.1:p.Asp325Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X26 XM_047430458.1:c.975T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X19 XP_047286414.1:p.Asp325Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X27 XM_005266464.4:c.1011T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X20 XP_005266521.1:p.Asp337Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X28 XM_017020655.2:c.972T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X21 XP_016876144.1:p.Asp324Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X29 XM_017020657.3:c.1008T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X22 XP_016876146.1:p.Asp336Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X30 XM_047430459.1:c.1008T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X22 XP_047286415.1:p.Asp336Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X31 XM_047430460.1:c.975T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X23 XP_047286416.1:p.Asp325Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X32 XM_024449379.2:c.972T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X24 XP_024305147.1:p.Asp324Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X33 XM_005266465.4:c.1008T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X25 XP_005266522.1:p.Asp336Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X34 XM_047430462.1:c.1008T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X25 XP_047286418.1:p.Asp336Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X35 XM_017020658.2:c.975T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X26 XP_016876147.1:p.Asp325Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X36 XM_005266467.4:c.1011T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X27 XP_005266524.1:p.Asp337Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X37 XM_017020659.2:c.972T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X28 XP_016876148.1:p.Asp324Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X38 XM_017020660.3:c.1008T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X29 XP_016876149.1:p.Asp336Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X39 XM_047430463.1:c.1008T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X29 XP_047286419.1:p.Asp336Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X40 XM_047430464.1:c.975T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X30 XP_047286420.1:p.Asp325Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X41 XM_017020661.2:c.972T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X31 XP_016876150.1:p.Asp324Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X42 XM_047430465.1:c.1011T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X32 XP_047286421.1:p.Asp337Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X43 XM_047430466.1:c.1008T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X33 XP_047286422.1:p.Asp336Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X44 XM_047430467.1:c.975T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X34 XP_047286423.1:p.Asp325Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X45 XM_047430468.1:c.972T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X35 XP_047286424.1:p.Asp324Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X46 XM_047430469.1:c.1011T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X36 XP_047286425.1:p.Asp337Glu D (Asp) > E (Glu) Missense Variant
SUPT20H transcript variant X47 XM_047430470.1:c.972T>G D [GAT] > E [GAG] Coding Sequence Variant
transcription factor SPT20 homolog isoform X37 XP_047286426.1:p.Asp324Glu D (Asp) > E (Glu) Missense Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement A= C
GRCh38.p14 chr 13 NC_000013.11:g.37028291= NC_000013.11:g.37028291A>C
GRCh37.p13 chr 13 NC_000013.10:g.37602428= NC_000013.10:g.37602428A>C
SUPT20H transcript variant X2 XM_005266449.5:c.1011= XM_005266449.5:c.1011T>G
SUPT20H transcript variant X2 XM_005266449.4:c.1011= XM_005266449.4:c.1011T>G
SUPT20H transcript variant X2 XM_005266449.3:c.1011= XM_005266449.3:c.1011T>G
SUPT20H transcript variant X2 XM_005266449.2:c.1011= XM_005266449.2:c.1011T>G
SUPT20H transcript variant X3 XM_005266449.1:c.1011= XM_005266449.1:c.1011T>G
SUPT20H transcript variant X6 XM_005266456.5:c.975= XM_005266456.5:c.975T>G
SUPT20H transcript variant X8 XM_005266456.4:c.975= XM_005266456.4:c.975T>G
SUPT20H transcript variant X5 XM_005266456.3:c.975= XM_005266456.3:c.975T>G
SUPT20H transcript variant X9 XM_005266456.2:c.975= XM_005266456.2:c.975T>G
SUPT20H transcript variant X10 XM_005266456.1:c.975= XM_005266456.1:c.975T>G
SUPT20H transcript variant X10 XM_005266458.5:c.972= XM_005266458.5:c.972T>G
SUPT20H transcript variant X11 XM_005266458.4:c.972= XM_005266458.4:c.972T>G
SUPT20H transcript variant X8 XM_005266458.3:c.972= XM_005266458.3:c.972T>G
SUPT20H transcript variant X12 XM_005266458.2:c.972= XM_005266458.2:c.972T>G
SUPT20H transcript variant X12 XM_005266458.1:c.972= XM_005266458.1:c.972T>G
SUPT20H transcript variant X3 XM_005266451.5:c.1008= XM_005266451.5:c.1008T>G
SUPT20H transcript variant X5 XM_005266451.4:c.1008= XM_005266451.4:c.1008T>G
SUPT20H transcript variant X3 XM_005266451.3:c.1008= XM_005266451.3:c.1008T>G
SUPT20H transcript variant X5 XM_005266451.2:c.1008= XM_005266451.2:c.1008T>G
SUPT20H transcript variant X5 XM_005266451.1:c.1008= XM_005266451.1:c.1008T>G
SUPT20H transcript variant X5 XM_005266454.5:c.975= XM_005266454.5:c.975T>G
SUPT20H transcript variant X7 XM_005266454.4:c.975= XM_005266454.4:c.975T>G
SUPT20H transcript variant X4 XM_005266454.3:c.975= XM_005266454.3:c.975T>G
SUPT20H transcript variant X8 XM_005266454.2:c.975= XM_005266454.2:c.975T>G
SUPT20H transcript variant X8 XM_005266454.1:c.975= XM_005266454.1:c.975T>G
SUPT20H transcript variant X8 XM_005266457.5:c.972= XM_005266457.5:c.972T>G
SUPT20H transcript variant X10 XM_005266457.4:c.972= XM_005266457.4:c.972T>G
SUPT20H transcript variant X7 XM_005266457.3:c.972= XM_005266457.3:c.972T>G
SUPT20H transcript variant X11 XM_005266457.2:c.972= XM_005266457.2:c.972T>G
SUPT20H transcript variant X11 XM_005266457.1:c.972= XM_005266457.1:c.972T>G
SUPT20H transcript variant X22 XM_005266462.5:c.1011= XM_005266462.5:c.1011T>G
SUPT20H transcript variant X16 XM_005266462.4:c.1011= XM_005266462.4:c.1011T>G
SUPT20H transcript variant X16 XM_005266462.3:c.1011= XM_005266462.3:c.1011T>G
SUPT20H transcript variant X16 XM_005266462.2:c.1011= XM_005266462.2:c.1011T>G
SUPT20H transcript variant X16 XM_005266462.1:c.1011= XM_005266462.1:c.1011T>G
SUPT20H transcript variant X17 XM_005266461.4:c.1011= XM_005266461.4:c.1011T>G
SUPT20H transcript variant X15 XM_005266461.3:c.1011= XM_005266461.3:c.1011T>G
SUPT20H transcript variant X15 XM_005266461.2:c.1011= XM_005266461.2:c.1011T>G
SUPT20H transcript variant X15 XM_005266461.1:c.1011= XM_005266461.1:c.1011T>G
SUPT20H transcript variant 2 NM_017569.4:c.1011= NM_017569.4:c.1011T>G
SUPT20H transcript variant 2 NM_017569.3:c.1011= NM_017569.3:c.1011T>G
SUPT20H transcript variant X27 XM_005266464.4:c.1011= XM_005266464.4:c.1011T>G
SUPT20H transcript variant X18 XM_005266464.3:c.1011= XM_005266464.3:c.1011T>G
SUPT20H transcript variant X18 XM_005266464.2:c.1011= XM_005266464.2:c.1011T>G
SUPT20H transcript variant X18 XM_005266464.1:c.1011= XM_005266464.1:c.1011T>G
SUPT20H transcript variant X33 XM_005266465.4:c.1008= XM_005266465.4:c.1008T>G
SUPT20H transcript variant X23 XM_005266465.3:c.1008= XM_005266465.3:c.1008T>G
SUPT20H transcript variant X18 XM_005266465.2:c.1008= XM_005266465.2:c.1008T>G
SUPT20H transcript variant X19 XM_005266465.1:c.1008= XM_005266465.1:c.1008T>G
SUPT20H transcript variant X36 XM_005266467.4:c.1011= XM_005266467.4:c.1011T>G
SUPT20H transcript variant X25 XM_005266467.3:c.1011= XM_005266467.3:c.1011T>G
SUPT20H transcript variant X21 XM_005266467.2:c.1011= XM_005266467.2:c.1011T>G
SUPT20H transcript variant X21 XM_005266467.1:c.1011= XM_005266467.1:c.1011T>G
SUPT20H transcript variant X1 XM_005266447.3:c.1011= XM_005266447.3:c.1011T>G
SUPT20H transcript variant X1 XM_005266447.2:c.1011= XM_005266447.2:c.1011T>G
SUPT20H transcript variant X1 XM_005266447.1:c.1011= XM_005266447.1:c.1011T>G
SUPT20H transcript variant X7 XM_005266455.3:c.1011= XM_005266455.3:c.1011T>G
SUPT20H transcript variant X9 XM_005266455.2:c.1011= XM_005266455.2:c.1011T>G
SUPT20H transcript variant X9 XM_005266455.1:c.1011= XM_005266455.1:c.1011T>G
SUPT20H transcript variant X9 XM_017020653.3:c.1008= XM_017020653.3:c.1008T>G
SUPT20H transcript variant X12 XM_017020653.2:c.1008= XM_017020653.2:c.1008T>G
SUPT20H transcript variant X9 XM_017020653.1:c.1008= XM_017020653.1:c.1008T>G
SUPT20H transcript variant X14 XM_005266460.3:c.1011= XM_005266460.3:c.1011T>G
SUPT20H transcript variant X13 XM_005266460.2:c.1011= XM_005266460.2:c.1011T>G
SUPT20H transcript variant X14 XM_005266460.1:c.1011= XM_005266460.1:c.1011T>G
SUPT20H transcript variant 1 NM_001014286.3:c.1008= NM_001014286.3:c.1008T>G
SUPT20H transcript variant 1 NM_001014286.2:c.1008= NM_001014286.2:c.1008T>G
SUPT20H transcript variant X29 XM_017020657.3:c.1008= XM_017020657.3:c.1008T>G
SUPT20H transcript variant X21 XM_017020657.2:c.1008= XM_017020657.2:c.1008T>G
SUPT20H transcript variant X17 XM_017020657.1:c.1008= XM_017020657.1:c.1008T>G
SUPT20H transcript variant X38 XM_017020660.3:c.1008= XM_017020660.3:c.1008T>G
SUPT20H transcript variant X27 XM_017020660.2:c.1008= XM_017020660.2:c.1008T>G
SUPT20H transcript variant X22 XM_017020660.1:c.1008= XM_017020660.1:c.1008T>G
SUPT20H transcript variant 5 NM_001278482.2:c.1011= NM_001278482.2:c.1011T>G
SUPT20H transcript variant 5 NM_001278482.1:c.1011= NM_001278482.1:c.1011T>G
SUPT20H transcript variant 3 NM_001278480.2:c.1008= NM_001278480.2:c.1008T>G
SUPT20H transcript variant 3 NM_001278480.1:c.1008= NM_001278480.1:c.1008T>G
SUPT20H transcript variant X25 XM_017020654.2:c.975= XM_017020654.2:c.975T>G
SUPT20H transcript variant X17 XM_017020654.1:c.975= XM_017020654.1:c.975T>G
SUPT20H transcript variant X28 XM_017020655.2:c.972= XM_017020655.2:c.972T>G
SUPT20H transcript variant X19 XM_017020655.1:c.972= XM_017020655.1:c.972T>G
SUPT20H transcript variant X32 XM_024449379.2:c.972= XM_024449379.2:c.972T>G
SUPT20H transcript variant X22 XM_024449379.1:c.972= XM_024449379.1:c.972T>G
SUPT20H transcript variant 4 NM_001278481.2:c.1011= NM_001278481.2:c.1011T>G
SUPT20H transcript variant 4 NM_001278481.1:c.1011= NM_001278481.1:c.1011T>G
SUPT20H transcript variant X35 XM_017020658.2:c.975= XM_017020658.2:c.975T>G
SUPT20H transcript variant X24 XM_017020658.1:c.975= XM_017020658.1:c.975T>G
SUPT20H transcript variant X37 XM_017020659.2:c.972= XM_017020659.2:c.972T>G
SUPT20H transcript variant X26 XM_017020659.1:c.972= XM_017020659.1:c.972T>G
SUPT20H transcript variant X41 XM_017020661.2:c.972= XM_017020661.2:c.972T>G
SUPT20H transcript variant X28 XM_017020661.1:c.972= XM_017020661.1:c.972T>G
SUPT20H transcript variant X4 XM_047430444.1:c.1008= XM_047430444.1:c.1008T>G
SUPT20H transcript variant X13 XM_047430448.1:c.972= XM_047430448.1:c.972T>G
SUPT20H transcript variant X15 XM_047430449.1:c.1008= XM_047430449.1:c.1008T>G
SUPT20H transcript variant X11 XM_047430445.1:c.975= XM_047430445.1:c.975T>G
SUPT20H transcript variant X12 XM_047430447.1:c.972= XM_047430447.1:c.972T>G
SUPT20H transcript variant X16 XM_047430450.1:c.975= XM_047430450.1:c.975T>G
SUPT20H transcript variant X19 XM_047430452.1:c.1008= XM_047430452.1:c.1008T>G
SUPT20H transcript variant X18 XM_047430451.1:c.972= XM_047430451.1:c.972T>G
SUPT20H transcript variant X23 XM_047430456.1:c.1011= XM_047430456.1:c.1011T>G
SUPT20H transcript variant X24 XM_047430457.1:c.1008= XM_047430457.1:c.1008T>G
SUPT20H transcript variant X20 XM_047430453.1:c.975= XM_047430453.1:c.975T>G
SUPT20H transcript variant X21 XM_047430454.1:c.972= XM_047430454.1:c.972T>G
SUPT20H transcript variant X26 XM_047430458.1:c.975= XM_047430458.1:c.975T>G
SUPT20H transcript variant X30 XM_047430459.1:c.1008= XM_047430459.1:c.1008T>G
SUPT20H transcript variant X34 XM_047430462.1:c.1008= XM_047430462.1:c.1008T>G
SUPT20H transcript variant X39 XM_047430463.1:c.1008= XM_047430463.1:c.1008T>G
SUPT20H transcript variant X31 XM_047430460.1:c.975= XM_047430460.1:c.975T>G
SUPT20H transcript variant X40 XM_047430464.1:c.975= XM_047430464.1:c.975T>G
SUPT20H transcript variant X42 XM_047430465.1:c.1011= XM_047430465.1:c.1011T>G
SUPT20H transcript variant X43 XM_047430466.1:c.1008= XM_047430466.1:c.1008T>G
SUPT20H transcript variant X44 XM_047430467.1:c.975= XM_047430467.1:c.975T>G
SUPT20H transcript variant X45 XM_047430468.1:c.972= XM_047430468.1:c.972T>G
SUPT20H transcript variant X46 XM_047430469.1:c.1011= XM_047430469.1:c.1011T>G
SUPT20H transcript variant X47 XM_047430470.1:c.972= XM_047430470.1:c.972T>G
transcription factor SPT20 homolog isoform X1 XP_005266506.1:p.Asp337= XP_005266506.1:p.Asp337Glu
transcription factor SPT20 homolog isoform X3 XP_005266513.1:p.Asp325= XP_005266513.1:p.Asp325Glu
transcription factor SPT20 homolog isoform X5 XP_005266515.1:p.Asp324= XP_005266515.1:p.Asp324Glu
transcription factor SPT20 homolog isoform X2 XP_005266508.1:p.Asp336= XP_005266508.1:p.Asp336Glu
transcription factor SPT20 homolog isoform X3 XP_005266511.1:p.Asp325= XP_005266511.1:p.Asp325Glu
transcription factor SPT20 homolog isoform X5 XP_005266514.1:p.Asp324= XP_005266514.1:p.Asp324Glu
transcription factor SPT20 homolog isoform X17 XP_005266519.1:p.Asp337= XP_005266519.1:p.Asp337Glu
transcription factor SPT20 homolog isoform X12 XP_005266518.1:p.Asp337= XP_005266518.1:p.Asp337Glu
transcription factor SPT20 homolog isoform b NP_060039.1:p.Asp337= NP_060039.1:p.Asp337Glu
transcription factor SPT20 homolog isoform X20 XP_005266521.1:p.Asp337= XP_005266521.1:p.Asp337Glu
transcription factor SPT20 homolog isoform X25 XP_005266522.1:p.Asp336= XP_005266522.1:p.Asp336Glu
transcription factor SPT20 homolog isoform X27 XP_005266524.1:p.Asp337= XP_005266524.1:p.Asp337Glu
transcription factor SPT20 homolog isoform X1 XP_005266504.1:p.Asp337= XP_005266504.1:p.Asp337Glu
transcription factor SPT20 homolog isoform X4 XP_005266512.1:p.Asp337= XP_005266512.1:p.Asp337Glu
transcription factor SPT20 homolog isoform X6 XP_016876142.1:p.Asp336= XP_016876142.1:p.Asp336Glu
transcription factor SPT20 homolog isoform X9 XP_005266517.1:p.Asp337= XP_005266517.1:p.Asp337Glu
transcription factor SPT20 homolog isoform a NP_001014308.2:p.Asp336= NP_001014308.2:p.Asp336Glu
transcription factor SPT20 homolog isoform X22 XP_016876146.1:p.Asp336= XP_016876146.1:p.Asp336Glu
transcription factor SPT20 homolog isoform X29 XP_016876149.1:p.Asp336= XP_016876149.1:p.Asp336Glu
transcription factor SPT20 homolog isoform b NP_001265411.1:p.Asp337= NP_001265411.1:p.Asp337Glu
transcription factor SPT20 homolog isoform c NP_001265409.1:p.Asp336= NP_001265409.1:p.Asp336Glu
transcription factor SPT20 homolog isoform X19 XP_016876143.1:p.Asp325= XP_016876143.1:p.Asp325Glu
transcription factor SPT20 homolog isoform X21 XP_016876144.1:p.Asp324= XP_016876144.1:p.Asp324Glu
transcription factor SPT20 homolog isoform X24 XP_024305147.1:p.Asp324= XP_024305147.1:p.Asp324Glu
transcription factor SPT20 homolog isoform b NP_001265410.1:p.Asp337= NP_001265410.1:p.Asp337Glu
transcription factor SPT20 homolog isoform X26 XP_016876147.1:p.Asp325= XP_016876147.1:p.Asp325Glu
transcription factor SPT20 homolog isoform X28 XP_016876148.1:p.Asp324= XP_016876148.1:p.Asp324Glu
transcription factor SPT20 homolog isoform X31 XP_016876150.1:p.Asp324= XP_016876150.1:p.Asp324Glu
transcription factor SPT20 homolog isoform X2 XP_047286400.1:p.Asp336= XP_047286400.1:p.Asp336Glu
transcription factor SPT20 homolog isoform X8 XP_047286404.1:p.Asp324= XP_047286404.1:p.Asp324Glu
transcription factor SPT20 homolog isoform X10 XP_047286405.1:p.Asp336= XP_047286405.1:p.Asp336Glu
transcription factor SPT20 homolog isoform X7 XP_047286401.1:p.Asp325= XP_047286401.1:p.Asp325Glu
transcription factor SPT20 homolog isoform X8 XP_047286403.1:p.Asp324= XP_047286403.1:p.Asp324Glu
transcription factor SPT20 homolog isoform X11 XP_047286406.1:p.Asp325= XP_047286406.1:p.Asp325Glu
transcription factor SPT20 homolog isoform X14 XP_047286408.1:p.Asp336= XP_047286408.1:p.Asp336Glu
transcription factor SPT20 homolog isoform X13 XP_047286407.1:p.Asp324= XP_047286407.1:p.Asp324Glu
transcription factor SPT20 homolog isoform X17 XP_047286412.1:p.Asp337= XP_047286412.1:p.Asp337Glu
transcription factor SPT20 homolog isoform X18 XP_047286413.1:p.Asp336= XP_047286413.1:p.Asp336Glu
transcription factor SPT20 homolog isoform X15 XP_047286409.1:p.Asp325= XP_047286409.1:p.Asp325Glu
transcription factor SPT20 homolog isoform X16 XP_047286410.1:p.Asp324= XP_047286410.1:p.Asp324Glu
transcription factor SPT20 homolog isoform X19 XP_047286414.1:p.Asp325= XP_047286414.1:p.Asp325Glu
transcription factor SPT20 homolog isoform X22 XP_047286415.1:p.Asp336= XP_047286415.1:p.Asp336Glu
transcription factor SPT20 homolog isoform X25 XP_047286418.1:p.Asp336= XP_047286418.1:p.Asp336Glu
transcription factor SPT20 homolog isoform X29 XP_047286419.1:p.Asp336= XP_047286419.1:p.Asp336Glu
transcription factor SPT20 homolog isoform X23 XP_047286416.1:p.Asp325= XP_047286416.1:p.Asp325Glu
transcription factor SPT20 homolog isoform X30 XP_047286420.1:p.Asp325= XP_047286420.1:p.Asp325Glu
transcription factor SPT20 homolog isoform X32 XP_047286421.1:p.Asp337= XP_047286421.1:p.Asp337Glu
transcription factor SPT20 homolog isoform X33 XP_047286422.1:p.Asp336= XP_047286422.1:p.Asp336Glu
transcription factor SPT20 homolog isoform X34 XP_047286423.1:p.Asp325= XP_047286423.1:p.Asp325Glu
transcription factor SPT20 homolog isoform X35 XP_047286424.1:p.Asp324= XP_047286424.1:p.Asp324Glu
transcription factor SPT20 homolog isoform X36 XP_047286425.1:p.Asp337= XP_047286425.1:p.Asp337Glu
transcription factor SPT20 homolog isoform X37 XP_047286426.1:p.Asp324= XP_047286426.1:p.Asp324Glu
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

1 SubSNP, 1 Frequency submissions
No Submitter Submission ID Date (Build)
1 GNOMAD ss2740370451 Nov 08, 2017 (151)
2 gnomAD - Exomes NC_000013.10 - 37602428 Jul 13, 2019 (153)
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History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
9613459, ss2740370451 NC_000013.10:37602427:A:C NC_000013.11:37028290:A:C (self)
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Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs1476374201

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The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post820+afb47a3d