Name: rs149177436
Published: September 21, 2022
License: Open Access

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs149177436

Current Build 156

Released September 21, 2022

Organism: Homo sapiens
Position: chr1:173951323-173951331 (GRCh38.p14) Help
The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.
Alleles: delC / dupC / dupCC / dupCCC
Variation Type: Indel Insertion and Deletion
Frequency: delC=0.017998 (4764/264690, TOPMED)
dupC=0.02843 (434/15264, ALFA)
dupC=0.0969 (434/4480, Estonian) (+ 6 more)
delC=0.0220 (92/4179, 1000G)
dupC=0.1139 (439/3854, ALSPAC)
dupC=0.1065 (395/3708, TWINSUK)
dupC=0.126 (126/998, GoNL)
dupC=0.128 (77/600, NorthernSweden)
dupC=0.25 (10/40, GENOME_DK)

Clinical Significance: Not Reported in ClinVar
Gene : Consequence: RC3H1 : Intron Variant
Publications: 0 citations
Genomic View: See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315

Population	Group	Sample Size	Ref Allele	Alt Allele	Ref HMOZ	Alt HMOZ	HTRZ	HWEP
Total	Global	15264	CCCCCCCCC=0.97098	CCCCCCCC=0.00059, CCCCCCCCCC=0.02843, CCCCCCCCCCC=0.00000, CCCCCCCCCCCC=0.00000	0.946871	0.003804	0.049324	32
European	Sub	12456	CCCCCCCCC=0.96524	CCCCCCCC=0.00000, CCCCCCCCCC=0.03476, CCCCCCCCCCC=0.00000, CCCCCCCCCCCC=0.00000	0.935132	0.004656	0.060212	34
African	Sub	1674	CCCCCCCCC=0.9946	CCCCCCCC=0.0054, CCCCCCCCCC=0.0000, CCCCCCCCCCC=0.0000, CCCCCCCCCCCC=0.0000	1.0	0.0	0.0	N/A
African Others	Sub	68	CCCCCCCCC=1.00	CCCCCCCC=0.00, CCCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCC=0.00	1.0	0.0	0.0	N/A
African American	Sub	1606	CCCCCCCCC=0.9944	CCCCCCCC=0.0056, CCCCCCCCCC=0.0000, CCCCCCCCCCC=0.0000, CCCCCCCCCCCC=0.0000	1.0	0.0	0.0	N/A
Asian	Sub	64	CCCCCCCCC=1.00	CCCCCCCC=0.00, CCCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCC=0.00	1.0	0.0	0.0	N/A
East Asian	Sub	42	CCCCCCCCC=1.00	CCCCCCCC=0.00, CCCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCC=0.00	1.0	0.0	0.0	N/A
Other Asian	Sub	22	CCCCCCCCC=1.00	CCCCCCCC=0.00, CCCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCC=0.00	1.0	0.0	0.0	N/A
Latin American 1	Sub	104	CCCCCCCCC=1.000	CCCCCCCC=0.000, CCCCCCCCCC=0.000, CCCCCCCCCCC=0.000, CCCCCCCCCCCC=0.000	1.0	0.0	0.0	N/A
Latin American 2	Sub	522	CCCCCCCCC=1.000	CCCCCCCC=0.000, CCCCCCCCCC=0.000, CCCCCCCCCCC=0.000, CCCCCCCCCCCC=0.000	1.0	0.0	0.0	N/A
South Asian	Sub	78	CCCCCCCCC=1.00	CCCCCCCC=0.00, CCCCCCCCCC=0.00, CCCCCCCCCCC=0.00, CCCCCCCCCCCC=0.00	1.0	0.0	0.0	N/A
Other	Sub	366	CCCCCCCCC=0.997	CCCCCCCC=0.000, CCCCCCCCCC=0.003, CCCCCCCCCCC=0.000, CCCCCCCCCCCC=0.000	0.994536	0.0	0.005464	0

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

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Study	Population	Group	Sample Size	Ref Allele	Alt Allele
TopMed	Global	Study-wide	264690	(C)₉=0.982002	delC=0.017998
Allele Frequency Aggregator	Total	Global	15264	(C)₉=0.97098	delC=0.00059, dupC=0.02843, dupCC=0.00000, dupCCC=0.00000
Allele Frequency Aggregator	European	Sub	12456	(C)₉=0.96524	delC=0.00000, dupC=0.03476, dupCC=0.00000, dupCCC=0.00000
Allele Frequency Aggregator	African	Sub	1674	(C)₉=0.9946	delC=0.0054, dupC=0.0000, dupCC=0.0000, dupCCC=0.0000
Allele Frequency Aggregator	Latin American 2	Sub	522	(C)₉=1.000	delC=0.000, dupC=0.000, dupCC=0.000, dupCCC=0.000
Allele Frequency Aggregator	Other	Sub	366	(C)₉=0.997	delC=0.000, dupC=0.003, dupCC=0.000, dupCCC=0.000
Allele Frequency Aggregator	Latin American 1	Sub	104	(C)₉=1.000	delC=0.000, dupC=0.000, dupCC=0.000, dupCCC=0.000
Allele Frequency Aggregator	South Asian	Sub	78	(C)₉=1.00	delC=0.00, dupC=0.00, dupCC=0.00, dupCCC=0.00
Allele Frequency Aggregator	Asian	Sub	64	(C)₉=1.00	delC=0.00, dupC=0.00, dupCC=0.00, dupCCC=0.00
Genetic variation in the Estonian population	Estonian	Study-wide	4480	- No frequency provided	dupC=0.0969
1000Genomes	Global	Study-wide	4179	(C)₉=0.9780	delC=0.0220
1000Genomes	African	Sub	1063	(C)₉=0.9191	delC=0.0809
1000Genomes	Europe	Sub	893	(C)₉=1.000	delC=0.000
1000Genomes	East Asian	Sub	802	(C)₉=0.998	delC=0.002
1000Genomes	South Asian	Sub	802	(C)₉=0.998	delC=0.002
1000Genomes	American	Sub	619	(C)₉=0.997	delC=0.003
The Avon Longitudinal Study of Parents and Children	PARENT AND CHILD COHORT	Study-wide	3854	- No frequency provided	dupC=0.1139
UK 10K study - Twins	TWIN COHORT	Study-wide	3708	- No frequency provided	dupC=0.1065
Genome of the Netherlands Release 5	Genome of the Netherlands	Study-wide	998	- No frequency provided	dupC=0.126
Northern Sweden	ACPOP	Study-wide	600	- No frequency provided	dupC=0.128
The Danish reference pan genome	Danish	Study-wide	40	- No frequency provided	dupC=0.25

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements

Sequence name	Change
GRCh38.p14 chr 1	NC_000001.11:g.173951331del
GRCh38.p14 chr 1	NC_000001.11:g.173951331dup
GRCh38.p14 chr 1	NC_000001.11:g.173951330_173951331dup
GRCh38.p14 chr 1	NC_000001.11:g.173951329_173951331dup
GRCh37.p13 chr 1	NC_000001.10:g.173920469del
GRCh37.p13 chr 1	NC_000001.10:g.173920469dup
GRCh37.p13 chr 1	NC_000001.10:g.173920468_173920469dup
GRCh37.p13 chr 1	NC_000001.10:g.173920467_173920469dup

Gene: RC3H1, ring finger and CCCH-type domains 1 (minus strand)

Molecule type	Change	Amino acid[Codon]	SO Term
RC3H1 transcript variant 1	NM_001300850.1:c.2523+663… NM_001300850.1:c.2523+663del	N/A	Intron Variant
RC3H1 transcript variant 3	NM_001300851.1:c.2523+663… NM_001300851.1:c.2523+663del	N/A	Intron Variant
RC3H1 transcript variant 4	NM_001300852.1:c.2523+663… NM_001300852.1:c.2523+663del	N/A	Intron Variant
RC3H1 transcript variant 2	NM_172071.4:c.2523+663del	N/A	Intron Variant
RC3H1 transcript variant X8	XM_005244921.4:c.2460+663… XM_005244921.4:c.2460+663del	N/A	Intron Variant
RC3H1 transcript variant X1	XM_047447089.1:c.2523+663… XM_047447089.1:c.2523+663del	N/A	Intron Variant
RC3H1 transcript variant X2	XM_047447090.1:c.2523+663… XM_047447090.1:c.2523+663del	N/A	Intron Variant
RC3H1 transcript variant X3	XM_047447091.1:c.2523+663… XM_047447091.1:c.2523+663del	N/A	Intron Variant
RC3H1 transcript variant X4	XM_047447092.1:c.2523+663… XM_047447092.1:c.2523+663del	N/A	Intron Variant
RC3H1 transcript variant X5	XM_047447093.1:c.2523+663… XM_047447093.1:c.2523+663del	N/A	Intron Variant
RC3H1 transcript variant X6	XM_047447094.1:c.2523+663… XM_047447094.1:c.2523+663del	N/A	Intron Variant
RC3H1 transcript variant X7	XM_047447095.1:c.2523+663… XM_047447095.1:c.2523+663del	N/A	Intron Variant
RC3H1 transcript variant X9	XM_047447096.1:c.2460+663… XM_047447096.1:c.2460+663del	N/A	Intron Variant
RC3H1 transcript variant X10	XM_047447097.1:c.2460+663… XM_047447097.1:c.2460+663del	N/A	Intron Variant
RC3H1 transcript variant X11	XM_047447101.1:c.2460+663… XM_047447101.1:c.2460+663del	N/A	Intron Variant
RC3H1 transcript variant X12	XM_047447102.1:c.2460+663… XM_047447102.1:c.2460+663del	N/A	Intron Variant
RC3H1 transcript variant X13	XM_047447103.1:c.2523+663… XM_047447103.1:c.2523+663del	N/A	Intron Variant
RC3H1 transcript variant X14	XM_047447104.1:c.2523+663… XM_047447104.1:c.2523+663del	N/A	Intron Variant
RC3H1 transcript variant X15	XM_047447105.1:c.2523+663… XM_047447105.1:c.2523+663del	N/A	Intron Variant
RC3H1 transcript variant X16	XM_047447106.1:c.2460+663… XM_047447106.1:c.2460+663del	N/A	Intron Variant

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement	(C)₉=	delC	dupC	dupCC	dupCCC
GRCh38.p14 chr 1	NC_000001.11:g.173951323_173951331=	NC_000001.11:g.173951331del	NC_000001.11:g.173951331dup	NC_000001.11:g.173951330_173951331dup	NC_000001.11:g.173951329_173951331dup
GRCh37.p13 chr 1	NC_000001.10:g.173920461_173920469=	NC_000001.10:g.173920469del	NC_000001.10:g.173920469dup	NC_000001.10:g.173920468_173920469dup	NC_000001.10:g.173920467_173920469dup
RC3H1 transcript variant 1	NM_001300850.1:c.2523+663=	NM_001300850.1:c.2523+663del	NM_001300850.1:c.2523+663dup	NM_001300850.1:c.2523+662_2523+663dup	NM_001300850.1:c.2523+661_2523+663dup
RC3H1 transcript variant 3	NM_001300851.1:c.2523+663=	NM_001300851.1:c.2523+663del	NM_001300851.1:c.2523+663dup	NM_001300851.1:c.2523+662_2523+663dup	NM_001300851.1:c.2523+661_2523+663dup
RC3H1 transcript variant 4	NM_001300852.1:c.2523+663=	NM_001300852.1:c.2523+663del	NM_001300852.1:c.2523+663dup	NM_001300852.1:c.2523+662_2523+663dup	NM_001300852.1:c.2523+661_2523+663dup
RC3H1 transcript	NM_172071.2:c.2523+663=	NM_172071.2:c.2523+663del	NM_172071.2:c.2523+663dup	NM_172071.2:c.2523+662_2523+663dup	NM_172071.2:c.2523+661_2523+663dup
RC3H1 transcript variant 2	NM_172071.4:c.2523+663=	NM_172071.4:c.2523+663del	NM_172071.4:c.2523+663dup	NM_172071.4:c.2523+662_2523+663dup	NM_172071.4:c.2523+661_2523+663dup
RC3H1 transcript variant X1	XM_005244918.1:c.2523+663=	XM_005244918.1:c.2523+663del	XM_005244918.1:c.2523+663dup	XM_005244918.1:c.2523+662_2523+663dup	XM_005244918.1:c.2523+661_2523+663dup
RC3H1 transcript variant X2	XM_005244919.1:c.2523+663=	XM_005244919.1:c.2523+663del	XM_005244919.1:c.2523+663dup	XM_005244919.1:c.2523+662_2523+663dup	XM_005244919.1:c.2523+661_2523+663dup
RC3H1 transcript variant X3	XM_005244920.1:c.2523+663=	XM_005244920.1:c.2523+663del	XM_005244920.1:c.2523+663dup	XM_005244920.1:c.2523+662_2523+663dup	XM_005244920.1:c.2523+661_2523+663dup
RC3H1 transcript variant X4	XM_005244921.1:c.2460+663=	XM_005244921.1:c.2460+663del	XM_005244921.1:c.2460+663dup	XM_005244921.1:c.2460+662_2460+663dup	XM_005244921.1:c.2460+661_2460+663dup
RC3H1 transcript variant X8	XM_005244921.4:c.2460+663=	XM_005244921.4:c.2460+663del	XM_005244921.4:c.2460+663dup	XM_005244921.4:c.2460+662_2460+663dup	XM_005244921.4:c.2460+661_2460+663dup
RC3H1 transcript variant X1	XM_047447089.1:c.2523+663=	XM_047447089.1:c.2523+663del	XM_047447089.1:c.2523+663dup	XM_047447089.1:c.2523+662_2523+663dup	XM_047447089.1:c.2523+661_2523+663dup
RC3H1 transcript variant X2	XM_047447090.1:c.2523+663=	XM_047447090.1:c.2523+663del	XM_047447090.1:c.2523+663dup	XM_047447090.1:c.2523+662_2523+663dup	XM_047447090.1:c.2523+661_2523+663dup
RC3H1 transcript variant X3	XM_047447091.1:c.2523+663=	XM_047447091.1:c.2523+663del	XM_047447091.1:c.2523+663dup	XM_047447091.1:c.2523+662_2523+663dup	XM_047447091.1:c.2523+661_2523+663dup
RC3H1 transcript variant X4	XM_047447092.1:c.2523+663=	XM_047447092.1:c.2523+663del	XM_047447092.1:c.2523+663dup	XM_047447092.1:c.2523+662_2523+663dup	XM_047447092.1:c.2523+661_2523+663dup
RC3H1 transcript variant X5	XM_047447093.1:c.2523+663=	XM_047447093.1:c.2523+663del	XM_047447093.1:c.2523+663dup	XM_047447093.1:c.2523+662_2523+663dup	XM_047447093.1:c.2523+661_2523+663dup
RC3H1 transcript variant X6	XM_047447094.1:c.2523+663=	XM_047447094.1:c.2523+663del	XM_047447094.1:c.2523+663dup	XM_047447094.1:c.2523+662_2523+663dup	XM_047447094.1:c.2523+661_2523+663dup
RC3H1 transcript variant X7	XM_047447095.1:c.2523+663=	XM_047447095.1:c.2523+663del	XM_047447095.1:c.2523+663dup	XM_047447095.1:c.2523+662_2523+663dup	XM_047447095.1:c.2523+661_2523+663dup
RC3H1 transcript variant X9	XM_047447096.1:c.2460+663=	XM_047447096.1:c.2460+663del	XM_047447096.1:c.2460+663dup	XM_047447096.1:c.2460+662_2460+663dup	XM_047447096.1:c.2460+661_2460+663dup
RC3H1 transcript variant X10	XM_047447097.1:c.2460+663=	XM_047447097.1:c.2460+663del	XM_047447097.1:c.2460+663dup	XM_047447097.1:c.2460+662_2460+663dup	XM_047447097.1:c.2460+661_2460+663dup
RC3H1 transcript variant X11	XM_047447101.1:c.2460+663=	XM_047447101.1:c.2460+663del	XM_047447101.1:c.2460+663dup	XM_047447101.1:c.2460+662_2460+663dup	XM_047447101.1:c.2460+661_2460+663dup
RC3H1 transcript variant X12	XM_047447102.1:c.2460+663=	XM_047447102.1:c.2460+663del	XM_047447102.1:c.2460+663dup	XM_047447102.1:c.2460+662_2460+663dup	XM_047447102.1:c.2460+661_2460+663dup
RC3H1 transcript variant X13	XM_047447103.1:c.2523+663=	XM_047447103.1:c.2523+663del	XM_047447103.1:c.2523+663dup	XM_047447103.1:c.2523+662_2523+663dup	XM_047447103.1:c.2523+661_2523+663dup
RC3H1 transcript variant X14	XM_047447104.1:c.2523+663=	XM_047447104.1:c.2523+663del	XM_047447104.1:c.2523+663dup	XM_047447104.1:c.2523+662_2523+663dup	XM_047447104.1:c.2523+661_2523+663dup
RC3H1 transcript variant X15	XM_047447105.1:c.2523+663=	XM_047447105.1:c.2523+663del	XM_047447105.1:c.2523+663dup	XM_047447105.1:c.2523+662_2523+663dup	XM_047447105.1:c.2523+661_2523+663dup
RC3H1 transcript variant X16	XM_047447106.1:c.2460+663=	XM_047447106.1:c.2460+663del	XM_047447106.1:c.2460+663dup	XM_047447106.1:c.2460+662_2460+663dup	XM_047447106.1:c.2460+661_2460+663dup

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

43 SubSNP, 19 Frequency submissions

No	Submitter	Submission ID	Date (Build)
1	GMI	ss288056829	May 04, 2012 (138)
2	1000GENOMES	ss326101044	May 09, 2011 (134)
3	1000GENOMES	ss326136982	Jan 10, 2018 (151)
4	LUNTER	ss551014993	Apr 25, 2013 (138)
5	LUNTER	ss552818316	Apr 25, 2013 (138)
6	TISHKOFF	ss554524220	Apr 25, 2013 (138)
7	SSMP	ss663133099	Apr 01, 2015 (144)
8	BILGI_BIOE	ss666116401	Apr 25, 2013 (138)
9	EVA-GONL	ss975824871	Aug 21, 2014 (142)
10	1000GENOMES	ss1367898394	Aug 21, 2014 (142)
11	1000GENOMES	ss1367898397	Aug 21, 2014 (142)
12	EVA_GENOME_DK	ss1574051121	Apr 01, 2015 (144)
13	EVA_UK10K_TWINSUK	ss1701414054	Apr 01, 2015 (144)
14	EVA_UK10K_ALSPAC	ss1701414055	Apr 01, 2015 (144)
15	JJLAB	ss2030357599	Sep 14, 2016 (149)
16	SYSTEMSBIOZJU	ss2624532754	Jan 10, 2018 (151)
17	SWEGEN	ss2987970343	Jan 10, 2018 (151)
18	EGCUT_WGS	ss3655915654	Jul 12, 2019 (153)
19	EVA_DECODE	ss3688045101	Jul 12, 2019 (153)
20	ACPOP	ss3727604627	Jul 12, 2019 (153)
21	PACBIO	ss3783606299	Jul 12, 2019 (153)
22	KHV_HUMAN_GENOMES	ss3799975754	Jul 12, 2019 (153)
23	KHV_HUMAN_GENOMES	ss3799975755	Jul 12, 2019 (153)
24	EVA	ss3826495709	Apr 25, 2020 (154)
25	KOGIC	ss3945918018	Apr 25, 2020 (154)
26	KOGIC	ss3945918019	Apr 25, 2020 (154)
27	GNOMAD	ss4006048245	Apr 25, 2021 (155)
28	GNOMAD	ss4006048246	Apr 25, 2021 (155)
29	GNOMAD	ss4006048247	Apr 25, 2021 (155)
30	TOPMED	ss4473032253	Apr 25, 2021 (155)
31	TOMMO_GENOMICS	ss5147088910	Apr 25, 2021 (155)
32	TOMMO_GENOMICS	ss5147088911	Apr 25, 2021 (155)
33	1000G_HIGH_COVERAGE	ss5244759572	Oct 12, 2022 (156)
34	1000G_HIGH_COVERAGE	ss5244759573	Oct 12, 2022 (156)
35	1000G_HIGH_COVERAGE	ss5244759574	Oct 12, 2022 (156)
36	HUGCELL_USP	ss5445300270	Oct 12, 2022 (156)
37	HUGCELL_USP	ss5445300271	Oct 12, 2022 (156)
38	TOMMO_GENOMICS	ss5674462276	Oct 12, 2022 (156)
39	TOMMO_GENOMICS	ss5674462277	Oct 12, 2022 (156)
40	TOMMO_GENOMICS	ss5674462278	Oct 12, 2022 (156)
41	EVA	ss5832851942	Oct 12, 2022 (156)
42	EVA	ss5849164155	Oct 12, 2022 (156)
43	EVA	ss5938666101	Oct 12, 2022 (156)
44	1000Genomes	NC_000001.10 - 173920461	Oct 11, 2018 (152)
45	The Avon Longitudinal Study of Parents and Children	NC_000001.10 - 173920461	Oct 11, 2018 (152)
46	Genetic variation in the Estonian population	NC_000001.10 - 173920461	Oct 11, 2018 (152)
47	The Danish reference pan genome	NC_000001.10 - 173920461	Apr 25, 2020 (154)
48	gnomAD - Genomes Submission ignored due to conflicting rows: Row 30920944 (NC_000001.11:173951322::C 18700/136432) Row 30920945 (NC_000001.11:173951322::CC 22/136614) Row 30920946 (NC_000001.11:173951322:C: 2350/136606)	-	Apr 25, 2021 (155)
49	gnomAD - Genomes Submission ignored due to conflicting rows: Row 30920944 (NC_000001.11:173951322::C 18700/136432) Row 30920945 (NC_000001.11:173951322::CC 22/136614) Row 30920946 (NC_000001.11:173951322:C: 2350/136606)	-	Apr 25, 2021 (155)
50	gnomAD - Genomes Submission ignored due to conflicting rows: Row 30920944 (NC_000001.11:173951322::C 18700/136432) Row 30920945 (NC_000001.11:173951322::CC 22/136614) Row 30920946 (NC_000001.11:173951322:C: 2350/136606)	-	Apr 25, 2021 (155)
51	Genome of the Netherlands Release 5	NC_000001.10 - 173920461	Apr 25, 2020 (154)
52	Korean Genome Project Submission ignored due to conflicting rows: Row 2296019 (NC_000001.11:173951323::C 473/1832) Row 2296020 (NC_000001.11:173951322:C: 1/1832)	-	Apr 25, 2020 (154)
53	Korean Genome Project Submission ignored due to conflicting rows: Row 2296019 (NC_000001.11:173951323::C 473/1832) Row 2296020 (NC_000001.11:173951322:C: 1/1832)	-	Apr 25, 2020 (154)
54	Northern Sweden	NC_000001.10 - 173920461	Jul 12, 2019 (153)
55	8.3KJPN Submission ignored due to conflicting rows: Row 5058217 (NC_000001.10:173920460::C 3673/16758) Row 5058218 (NC_000001.10:173920460::CC 7/16758)	-	Apr 25, 2021 (155)
56	8.3KJPN Submission ignored due to conflicting rows: Row 5058217 (NC_000001.10:173920460::C 3673/16758) Row 5058218 (NC_000001.10:173920460::CC 7/16758)	-	Apr 25, 2021 (155)
57	14KJPN Submission ignored due to conflicting rows: Row 8299380 (NC_000001.11:173951322::C 6218/28256) Row 8299381 (NC_000001.11:173951322::CC 11/28256) Row 8299382 (NC_000001.11:173951322::CCC 1/28256)	-	Oct 12, 2022 (156)
58	14KJPN Submission ignored due to conflicting rows: Row 8299380 (NC_000001.11:173951322::C 6218/28256) Row 8299381 (NC_000001.11:173951322::CC 11/28256) Row 8299382 (NC_000001.11:173951322::CCC 1/28256)	-	Oct 12, 2022 (156)
59	14KJPN Submission ignored due to conflicting rows: Row 8299380 (NC_000001.11:173951322::C 6218/28256) Row 8299381 (NC_000001.11:173951322::CC 11/28256) Row 8299382 (NC_000001.11:173951322::CCC 1/28256)	-	Oct 12, 2022 (156)
60	TopMed	NC_000001.11 - 173951323	Apr 25, 2021 (155)
61	UK 10K study - Twins	NC_000001.10 - 173920461	Oct 11, 2018 (152)
62	ALFA	NC_000001.11 - 173951323	Apr 25, 2021 (155)

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID	History Updated (Build)
rs200382773	May 15, 2013 (138)
rs369374986	May 15, 2013 (138)

Added to this RefSNP Cluster:

Submission IDs	Observation SPDI	Canonical SPDI	Source RSIDs
ss326136982, ss551014993	NC_000001.9:172187083:C:	NC_000001.11:173951322:CCCCCCCCC:C… NC_000001.11:173951322:CCCCCCCCC:CCCCCCCC	(self)
4276183, ss1367898394, ss3783606299	NC_000001.10:173920460:C:	NC_000001.11:173951322:CCCCCCCCC:C… NC_000001.11:173951322:CCCCCCCCC:CCCCCCCC	(self)
36638588, ss3799975755, ss3945918019, ss4006048247, ss4473032253, ss5244759573, ss5445300271	NC_000001.11:173951322:C:	NC_000001.11:173951322:CCCCCCCCC:C… NC_000001.11:173951322:CCCCCCCCC:CCCCCCCC	(self)
6267570837	NC_000001.11:173951322:CCCCCCCCC:C… NC_000001.11:173951322:CCCCCCCCC:CCCCCCCC	NC_000001.11:173951322:CCCCCCCCC:C… NC_000001.11:173951322:CCCCCCCCC:CCCCCCCC	(self)
ss326101044, ss552818316	NC_000001.9:172187083::C	NC_000001.11:173951322:CCCCCCCCC:C… NC_000001.11:173951322:CCCCCCCCC:CCCCCCCCCC	(self)
ss288056829	NC_000001.9:172187092::C	NC_000001.11:173951322:CCCCCCCCC:C… NC_000001.11:173951322:CCCCCCCCC:CCCCCCCCCC	(self)
2338655, 1653902, 181550, 1016544, 889492, 2338655, ss663133099, ss666116401, ss975824871, ss1574051121, ss1701414054, ss1701414055, ss2030357599, ss2624532754, ss2987970343, ss3655915654, ss3727604627, ss3826495709, ss5147088910, ss5832851942, ss5938666101	NC_000001.10:173920460::C	NC_000001.11:173951322:CCCCCCCCC:C… NC_000001.11:173951322:CCCCCCCCC:CCCCCCCCCC	(self)
ss1367898397	NC_000001.10:173920461::C	NC_000001.11:173951322:CCCCCCCCC:C… NC_000001.11:173951322:CCCCCCCCC:CCCCCCCCCC	(self)
ss554524220	NC_000001.10:173920469::C	NC_000001.11:173951322:CCCCCCCCC:C… NC_000001.11:173951322:CCCCCCCCC:CCCCCCCCCC	(self)
ss3688045101, ss4006048245, ss5244759572, ss5445300270, ss5674462276, ss5849164155	NC_000001.11:173951322::C	NC_000001.11:173951322:CCCCCCCCC:C… NC_000001.11:173951322:CCCCCCCCC:CCCCCCCCCC	(self)
6267570837	NC_000001.11:173951322:CCCCCCCCC:C… NC_000001.11:173951322:CCCCCCCCC:CCCCCCCCCC	NC_000001.11:173951322:CCCCCCCCC:C… NC_000001.11:173951322:CCCCCCCCC:CCCCCCCCCC	(self)
ss3799975754, ss3945918018	NC_000001.11:173951323::C	NC_000001.11:173951322:CCCCCCCCC:C… NC_000001.11:173951322:CCCCCCCCC:CCCCCCCCCC	(self)
ss5147088911	NC_000001.10:173920460::CC	NC_000001.11:173951322:CCCCCCCCC:C… NC_000001.11:173951322:CCCCCCCCC:CCCCCCCCCCC	(self)
ss4006048246, ss5244759574, ss5674462277	NC_000001.11:173951322::CC	NC_000001.11:173951322:CCCCCCCCC:C… NC_000001.11:173951322:CCCCCCCCC:CCCCCCCCCCC	(self)
6267570837	NC_000001.11:173951322:CCCCCCCCC:C… NC_000001.11:173951322:CCCCCCCCC:CCCCCCCCCCC	NC_000001.11:173951322:CCCCCCCCC:C… NC_000001.11:173951322:CCCCCCCCC:CCCCCCCCCCC	(self)
ss5674462278	NC_000001.11:173951322::CCC	NC_000001.11:173951322:CCCCCCCCC:C… NC_000001.11:173951322:CCCCCCCCC:CCCCCCCCCCCC
6267570837	NC_000001.11:173951322:CCCCCCCCC:C… NC_000001.11:173951322:CCCCCCCCC:CCCCCCCCCCCC	NC_000001.11:173951322:CCCCCCCCC:C… NC_000001.11:173951322:CCCCCCCCC:CCCCCCCCCCCC	(self)

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs149177436

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:

Select flank length:

Genomic regions, transcripts, and products
Top▲ Help
NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Choose placement

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

Reference SNP (rs) Report

rs149177436