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dbSNP Short Genetic Variations

Examples: rs268, BRCA1 and more Advanced search

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs2232165

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr3:172448354 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
G>A
Variation Type
SNV Single Nucleotide Variation
Frequency
A=0.041071 (10871/264690, TOPMED)
A=0.029084 (6886/236764, GnomAD_exome)
A=0.039590 (5554/140288, GnomAD) (+ 19 more)
A=0.033116 (3593/108498, ExAC)
A=0.04434 (3485/78598, PAGE_STUDY)
A=0.03385 (2457/72578, ALFA)
A=0.04544 (591/13006, GO-ESP)
A=0.0359 (230/6404, 1000G_30x)
A=0.0347 (174/5008, 1000G)
A=0.0232 (104/4480, Estonian)
A=0.0228 (88/3854, ALSPAC)
A=0.0262 (97/3708, TWINSUK)
A=0.0431 (49/1136, Daghestan)
A=0.024 (24/998, GoNL)
A=0.028 (17/600, NorthernSweden)
A=0.015 (8/534, MGP)
A=0.020 (6/298, FINRISK)
A=0.106 (23/216, Qatari)
A=0.048 (10/210, HapMap)
A=0.00 (0/88, Ancient Sardinia)
A=0.03 (1/40, GENOME_DK)
G=0.39 (11/28, SGDP_PRJ)
Clinical Significance
Reported in ClinVar
Gene : Consequence
GHSR : Synonymous Variant
Publications
6 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315
Population Group Sample Size Ref Allele Alt Allele Ref HMOZ Alt HMOZ HTRZ HWEP
Total Global 72672 G=0.96618 A=0.03382 0.933812 0.001459 0.064729 2
European Sub 55054 G=0.97266 A=0.02734 0.94598 0.000654 0.053366 0
African Sub 8398 G=0.9208 A=0.0792 0.848059 0.00643 0.145511 0
African Others Sub 282 G=0.918 A=0.082 0.843972 0.007092 0.148936 0
African American Sub 8116 G=0.9209 A=0.0791 0.848201 0.006407 0.145392 0
Asian Sub 544 G=1.000 A=0.000 1.0 0.0 0.0 N/A
East Asian Sub 446 G=1.000 A=0.000 1.0 0.0 0.0 N/A
Other Asian Sub 98 G=1.00 A=0.00 1.0 0.0 0.0 N/A
Latin American 1 Sub 536 G=0.937 A=0.063 0.876866 0.003731 0.119403 0
Latin American 2 Sub 922 G=0.985 A=0.015 0.969631 0.0 0.030369 0
South Asian Sub 186 G=0.952 A=0.048 0.913978 0.010753 0.075269 2
Other Sub 7032 G=0.9672 A=0.0328 0.936007 0.001706 0.062287 1


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
TopMed Global Study-wide 264690 G=0.958929 A=0.041071
gnomAD - Exomes Global Study-wide 236764 G=0.970916 A=0.029084
gnomAD - Exomes European Sub 122150 G=0.973631 A=0.026369
gnomAD - Exomes Asian Sub 48592 G=0.97030 A=0.02970
gnomAD - Exomes American Sub 34344 G=0.98576 A=0.01424
gnomAD - Exomes African Sub 15738 G=0.92312 A=0.07688
gnomAD - Exomes Ashkenazi Jewish Sub 9956 G=0.9679 A=0.0321
gnomAD - Exomes Other Sub 5984 G=0.9661 A=0.0339
gnomAD - Genomes Global Study-wide 140288 G=0.960410 A=0.039590
gnomAD - Genomes European Sub 75956 G=0.97559 A=0.02441
gnomAD - Genomes African Sub 42058 G=0.92365 A=0.07635
gnomAD - Genomes American Sub 13662 G=0.97789 A=0.02211
gnomAD - Genomes Ashkenazi Jewish Sub 3324 G=0.9708 A=0.0292
gnomAD - Genomes East Asian Sub 3134 G=0.9997 A=0.0003
gnomAD - Genomes Other Sub 2154 G=0.9587 A=0.0413
ExAC Global Study-wide 108498 G=0.966884 A=0.033116
ExAC Europe Sub 65036 G=0.97052 A=0.02948
ExAC Asian Sub 23226 G=0.96818 A=0.03182
ExAC American Sub 10478 G=0.98540 A=0.01460
ExAC African Sub 8978 G=0.9160 A=0.0840
ExAC Other Sub 780 G=0.962 A=0.038
The PAGE Study Global Study-wide 78598 G=0.95566 A=0.04434
The PAGE Study AfricanAmerican Sub 32442 G=0.92442 A=0.07558
The PAGE Study Mexican Sub 10802 G=0.98287 A=0.01713
The PAGE Study Asian Sub 8310 G=0.9992 A=0.0008
The PAGE Study PuertoRican Sub 7916 G=0.9661 A=0.0339
The PAGE Study NativeHawaiian Sub 4532 G=0.9923 A=0.0077
The PAGE Study Cuban Sub 4226 G=0.9624 A=0.0376
The PAGE Study Dominican Sub 3824 G=0.9532 A=0.0468
The PAGE Study CentralAmerican Sub 2448 G=0.9690 A=0.0310
The PAGE Study SouthAmerican Sub 1982 G=0.9803 A=0.0197
The PAGE Study NativeAmerican Sub 1260 G=0.9603 A=0.0397
The PAGE Study SouthAsian Sub 856 G=0.959 A=0.041
Allele Frequency Aggregator Total Global 72578 G=0.96615 A=0.03385
Allele Frequency Aggregator European Sub 54978 G=0.97263 A=0.02737
Allele Frequency Aggregator African Sub 8398 G=0.9208 A=0.0792
Allele Frequency Aggregator Other Sub 7014 G=0.9672 A=0.0328
Allele Frequency Aggregator Latin American 2 Sub 922 G=0.985 A=0.015
Allele Frequency Aggregator Asian Sub 544 G=1.000 A=0.000
Allele Frequency Aggregator Latin American 1 Sub 536 G=0.937 A=0.063
Allele Frequency Aggregator South Asian Sub 186 G=0.952 A=0.048
GO Exome Sequencing Project Global Study-wide 13006 G=0.95456 A=0.04544
GO Exome Sequencing Project European American Sub 8600 G=0.9708 A=0.0292
GO Exome Sequencing Project African American Sub 4406 G=0.9228 A=0.0772
1000Genomes_30x Global Study-wide 6404 G=0.9641 A=0.0359
1000Genomes_30x African Sub 1786 G=0.9216 A=0.0784
1000Genomes_30x Europe Sub 1266 G=0.9724 A=0.0276
1000Genomes_30x South Asian Sub 1202 G=0.9734 A=0.0266
1000Genomes_30x East Asian Sub 1170 G=1.0000 A=0.0000
1000Genomes_30x American Sub 980 G=0.977 A=0.023
1000Genomes Global Study-wide 5008 G=0.9653 A=0.0347
1000Genomes African Sub 1322 G=0.9236 A=0.0764
1000Genomes East Asian Sub 1008 G=1.0000 A=0.0000
1000Genomes Europe Sub 1006 G=0.9722 A=0.0278
1000Genomes South Asian Sub 978 G=0.972 A=0.028
1000Genomes American Sub 694 G=0.974 A=0.026
Genetic variation in the Estonian population Estonian Study-wide 4480 G=0.9768 A=0.0232
The Avon Longitudinal Study of Parents and Children PARENT AND CHILD COHORT Study-wide 3854 G=0.9772 A=0.0228
UK 10K study - Twins TWIN COHORT Study-wide 3708 G=0.9738 A=0.0262
Genome-wide autozygosity in Daghestan Global Study-wide 1136 G=0.9569 A=0.0431
Genome-wide autozygosity in Daghestan Daghestan Sub 628 G=0.965 A=0.035
Genome-wide autozygosity in Daghestan Near_East Sub 144 G=0.924 A=0.076
Genome-wide autozygosity in Daghestan Central Asia Sub 122 G=0.967 A=0.033
Genome-wide autozygosity in Daghestan Europe Sub 108 G=0.944 A=0.056
Genome-wide autozygosity in Daghestan South Asian Sub 98 G=0.97 A=0.03
Genome-wide autozygosity in Daghestan Caucasus Sub 36 G=0.92 A=0.08
Genome of the Netherlands Release 5 Genome of the Netherlands Study-wide 998 G=0.976 A=0.024
Northern Sweden ACPOP Study-wide 600 G=0.972 A=0.028
Medical Genome Project healthy controls from Spanish population Spanish controls Study-wide 534 G=0.985 A=0.015
FINRISK Finnish from FINRISK project Study-wide 298 G=0.980 A=0.020
Qatari Global Study-wide 216 G=0.894 A=0.106
HapMap Global Study-wide 210 G=0.952 A=0.048
HapMap African Sub 120 G=0.917 A=0.083
HapMap Asian Sub 90 G=1.00 A=0.00
Ancient Sardinia genome-wide 1240k capture data generation and analysis Global Study-wide 88 G=1.00 A=0.00
The Danish reference pan genome Danish Study-wide 40 G=0.97 A=0.03
SGDP_PRJ Global Study-wide 28 G=0.39 A=0.61
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 3 NC_000003.12:g.172448354G>A
GRCh37.p13 chr 3 NC_000003.11:g.172166144G>A
GHSR RefSeqGene NG_021159.1:g.5103C>T
Gene: GHSR, growth hormone secretagogue receptor (minus strand)
Molecule type Change Amino acid[Codon] SO Term
GHSR transcript variant 1a NM_198407.2:c.60C>T D [GAC] > D [GAT] Coding Sequence Variant
growth hormone secretagogue receptor type 1 isoform 1a NP_940799.1:p.Asp20= D (Asp) > D (Asp) Synonymous Variant
GHSR transcript variant 1b NM_004122.2:c.60C>T D [GAC] > D [GAT] Coding Sequence Variant
growth hormone secretagogue receptor type 1 isoform 1b NP_004113.1:p.Asp20= D (Asp) > D (Asp) Synonymous Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Allele: A (allele ID: 289537 )
ClinVar Accession Disease Names Clinical Significance
RCV000404056.3 Short stature due to growth hormone secretagogue receptor deficiency Benign
RCV002057867.3 not provided Benign
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement G= A
GRCh38.p14 chr 3 NC_000003.12:g.172448354= NC_000003.12:g.172448354G>A
GRCh37.p13 chr 3 NC_000003.11:g.172166144= NC_000003.11:g.172166144G>A
GHSR RefSeqGene NG_021159.1:g.5103= NG_021159.1:g.5103C>T
GHSR transcript variant 1a NM_198407.2:c.60= NM_198407.2:c.60C>T
GHSR transcript variant 1b NM_004122.2:c.60= NM_004122.2:c.60C>T
growth hormone secretagogue receptor type 1 isoform 1a NP_940799.1:p.Asp20= NP_940799.1:p.Asp20=
growth hormone secretagogue receptor type 1 isoform 1b NP_004113.1:p.Asp20= NP_004113.1:p.Asp20=
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

86 SubSNP, 22 Frequency, 2 ClinVar submissions
No Submitter Submission ID Date (Build)
1 GENAISSANCE ss3179434 Aug 15, 2001 (98)
2 IARC-GAN ss7844199 Mar 31, 2003 (113)
3 HG_BONN_CNS_SNPS ss12587067 Aug 26, 2003 (117)
4 PERLEGEN ss23320549 Sep 20, 2004 (123)
5 AFFY ss66453489 Dec 01, 2006 (127)
6 AFFY ss76245769 Dec 08, 2007 (130)
7 KRIBB_YJKIM ss81731299 Dec 14, 2007 (130)
8 SEATTLESEQ ss159706539 Dec 01, 2009 (131)
9 ILLUMINA ss160517890 Dec 01, 2009 (131)
10 1000GENOMES ss220582238 Jul 14, 2010 (132)
11 NHLBI-ESP ss342152292 May 09, 2011 (134)
12 ILLUMINA ss481285893 Sep 08, 2015 (146)
13 ILLUMINA ss483948182 May 04, 2012 (137)
14 ILLUMINA ss484511431 May 04, 2012 (137)
15 1000GENOMES ss490878099 May 04, 2012 (137)
16 GSK-GENETICS ss491269025 May 04, 2012 (137)
17 CLINSEQ_SNP ss491845533 May 04, 2012 (137)
18 ILLUMINA ss536142193 Sep 08, 2015 (146)
19 TISHKOFF ss557119556 Apr 25, 2013 (138)
20 ILLUMINA ss779521221 Sep 08, 2015 (146)
21 ILLUMINA ss782418010 Sep 08, 2015 (146)
22 ILLUMINA ss834991695 Sep 08, 2015 (146)
23 JMKIDD_LAB ss974450697 Aug 21, 2014 (142)
24 EVA-GONL ss979461335 Aug 21, 2014 (142)
25 JMKIDD_LAB ss1067457046 Aug 21, 2014 (142)
26 1000GENOMES ss1307294381 Aug 21, 2014 (142)
27 HAMMER_LAB ss1397359375 Sep 08, 2015 (146)
28 EVA_GENOME_DK ss1580298534 Apr 01, 2015 (144)
29 EVA_FINRISK ss1584031612 Apr 01, 2015 (144)
30 EVA_DECODE ss1588955991 Apr 01, 2015 (144)
31 EVA_UK10K_ALSPAC ss1608816652 Apr 01, 2015 (144)
32 EVA_UK10K_TWINSUK ss1651810685 Apr 01, 2015 (144)
33 EVA_EXAC ss1687295756 Apr 01, 2015 (144)
34 EVA_MGP ss1711041407 Apr 01, 2015 (144)
35 EVA_SVP ss1712631983 Apr 01, 2015 (144)
36 HAMMER_LAB ss1800447350 Sep 08, 2015 (146)
37 WEILL_CORNELL_DGM ss1922681550 Feb 12, 2016 (147)
38 ILLUMINA ss1958629070 Feb 12, 2016 (147)
39 JJLAB ss2021916150 Sep 14, 2016 (149)
40 HUMAN_LONGEVITY ss2258207264 Dec 20, 2016 (150)
41 ILLUMINA ss2634044437 Nov 08, 2017 (151)
42 GNOMAD ss2734203981 Nov 08, 2017 (151)
43 GNOMAD ss2747140570 Nov 08, 2017 (151)
44 GNOMAD ss2802394803 Nov 08, 2017 (151)
45 AFFY ss2985276633 Nov 08, 2017 (151)
46 AFFY ss2985901188 Nov 08, 2017 (151)
47 SWEGEN ss2993651423 Nov 08, 2017 (151)
48 ILLUMINA ss3022313888 Nov 08, 2017 (151)
49 ILLUMINA ss3628836869 Oct 12, 2018 (152)
50 ILLUMINA ss3631985658 Oct 12, 2018 (152)
51 ILLUMINA ss3636626364 Oct 12, 2018 (152)
52 ILLUMINA ss3652794843 Oct 12, 2018 (152)
53 ILLUMINA ss3654046557 Oct 12, 2018 (152)
54 EGCUT_WGS ss3661600684 Jul 13, 2019 (153)
55 EVA_DECODE ss3710837129 Jul 13, 2019 (153)
56 ILLUMINA ss3726081874 Jul 13, 2019 (153)
57 ACPOP ss3730597585 Jul 13, 2019 (153)
58 EVA ss3761042271 Jul 13, 2019 (153)
59 PAGE_CC ss3771083333 Jul 13, 2019 (153)
60 KHV_HUMAN_GENOMES ss3804177504 Jul 13, 2019 (153)
61 EVA ss3823974685 Apr 25, 2020 (154)
62 EVA ss3825646921 Apr 25, 2020 (154)
63 EVA ss3828220702 Apr 25, 2020 (154)
64 SGDP_PRJ ss3857570056 Apr 25, 2020 (154)
65 FSA-LAB ss3984268163 Apr 26, 2021 (155)
66 FSA-LAB ss3984268164 Apr 26, 2021 (155)
67 EVA ss3985037129 Apr 26, 2021 (155)
68 EVA ss3986261942 Apr 26, 2021 (155)
69 TOPMED ss4593579430 Apr 26, 2021 (155)
70 EVA ss5237002018 Apr 26, 2021 (155)
71 EVA ss5237640839 Oct 12, 2022 (156)
72 1000G_HIGH_COVERAGE ss5257018524 Oct 12, 2022 (156)
73 EVA ss5314912451 Oct 12, 2022 (156)
74 EVA ss5345083532 Oct 12, 2022 (156)
75 HUGCELL_USP ss5456063046 Oct 12, 2022 (156)
76 EVA ss5507312661 Oct 12, 2022 (156)
77 1000G_HIGH_COVERAGE ss5536986597 Oct 12, 2022 (156)
78 SANFORD_IMAGENETICS ss5624538816 Oct 12, 2022 (156)
79 SANFORD_IMAGENETICS ss5633758648 Oct 12, 2022 (156)
80 EVA ss5826863856 Oct 12, 2022 (156)
81 EVA ss5847231118 Oct 12, 2022 (156)
82 EVA ss5847990903 Oct 12, 2022 (156)
83 EVA ss5848597315 Oct 12, 2022 (156)
84 EVA ss5872143175 Oct 12, 2022 (156)
85 EVA ss5962135589 Oct 12, 2022 (156)
86 EVA ss5979680333 Oct 12, 2022 (156)
87 1000Genomes NC_000003.11 - 172166144 Oct 12, 2018 (152)
88 1000Genomes_30x NC_000003.12 - 172448354 Oct 12, 2022 (156)
89 The Avon Longitudinal Study of Parents and Children NC_000003.11 - 172166144 Oct 12, 2018 (152)
90 Genome-wide autozygosity in Daghestan NC_000003.10 - 173648838 Apr 25, 2020 (154)
91 Genetic variation in the Estonian population NC_000003.11 - 172166144 Oct 12, 2018 (152)
92 ExAC NC_000003.11 - 172166144 Oct 12, 2018 (152)
93 FINRISK NC_000003.11 - 172166144 Apr 25, 2020 (154)
94 The Danish reference pan genome NC_000003.11 - 172166144 Apr 25, 2020 (154)
95 gnomAD - Genomes NC_000003.12 - 172448354 Apr 26, 2021 (155)
96 gnomAD - Exomes NC_000003.11 - 172166144 Jul 13, 2019 (153)
97 GO Exome Sequencing Project NC_000003.11 - 172166144 Oct 12, 2018 (152)
98 Genome of the Netherlands Release 5 NC_000003.11 - 172166144 Apr 25, 2020 (154)
99 HapMap NC_000003.12 - 172448354 Apr 25, 2020 (154)
100 Medical Genome Project healthy controls from Spanish population NC_000003.11 - 172166144 Apr 25, 2020 (154)
101 Northern Sweden NC_000003.11 - 172166144 Jul 13, 2019 (153)
102 The PAGE Study NC_000003.12 - 172448354 Jul 13, 2019 (153)
103 Ancient Sardinia genome-wide 1240k capture data generation and analysis NC_000003.11 - 172166144 Apr 26, 2021 (155)
104 Qatari NC_000003.11 - 172166144 Apr 25, 2020 (154)
105 SGDP_PRJ NC_000003.11 - 172166144 Apr 25, 2020 (154)
106 TopMed NC_000003.12 - 172448354 Apr 26, 2021 (155)
107 UK 10K study - Twins NC_000003.11 - 172166144 Oct 12, 2018 (152)
108 ALFA NC_000003.12 - 172448354 Apr 26, 2021 (155)
109 ClinVar RCV000404056.3 Oct 12, 2022 (156)
110 ClinVar RCV002057867.3 Oct 12, 2022 (156)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs16845637 Oct 07, 2004 (123)
rs56532783 May 26, 2008 (130)
rs57930503 Feb 27, 2009 (130)
rs386497610 Aug 21, 2014 (142)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
335099, ss66453489, ss76245769, ss484511431, ss491269025, ss491845533, ss1397359375, ss1588955991, ss1712631983 NC_000003.10:173648837:G:A NC_000003.12:172448353:G:A (self)
18601463, 10365198, 7338932, 7242751, 28073, 6463473, 3296503, 432962, 4555610, 157167, 3882450, 263056, 4723480, 9587036, 10365198, ss220582238, ss342152292, ss481285893, ss483948182, ss490878099, ss536142193, ss557119556, ss779521221, ss782418010, ss834991695, ss974450697, ss979461335, ss1067457046, ss1307294381, ss1580298534, ss1584031612, ss1608816652, ss1651810685, ss1687295756, ss1711041407, ss1800447350, ss1922681550, ss1958629070, ss2021916150, ss2634044437, ss2734203981, ss2747140570, ss2802394803, ss2985276633, ss2985901188, ss2993651423, ss3022313888, ss3628836869, ss3631985658, ss3636626364, ss3652794843, ss3654046557, ss3661600684, ss3730597585, ss3761042271, ss3823974685, ss3825646921, ss3828220702, ss3857570056, ss3984268163, ss3984268164, ss3985037129, ss3986261942, ss5314912451, ss5345083532, ss5507312661, ss5624538816, ss5633758648, ss5826863856, ss5847231118, ss5847990903, ss5848597315, ss5962135589, ss5979680333 NC_000003.11:172166143:G:A NC_000003.12:172448353:G:A (self)
RCV000404056.3, RCV002057867.3, 24512532, 132142113, 2510536, 304802, 430956985, 11426870076, ss2258207264, ss3710837129, ss3726081874, ss3771083333, ss3804177504, ss4593579430, ss5237002018, ss5237640839, ss5257018524, ss5456063046, ss5536986597, ss5872143175 NC_000003.12:172448353:G:A NC_000003.12:172448353:G:A (self)
ss3179434, ss7844199, ss12587067, ss23320549, ss81731299, ss159706539, ss160517890 NT_005612.16:78661289:G:A NC_000003.12:172448353:G:A (self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

6 citations for rs2232165
PMID Title Author Year Journal
18828808 Association of pro-ghrelin and GHS-R1A gene polymorphisms and haplotypes with heavy alcohol use and body mass. Landgren S et al. 2008 Alcoholism, clinical and experimental research
20404923 Family and population-based studies of variation within the ghrelin receptor locus in relation to measures of obesity. Gjesing AP et al. 2010 PloS one
20586762 Genetic variation of the ghrelin signaling system in females with severe alcohol dependence. Landgren S et al. 2010 Alcoholism, clinical and experimental research
21448464 The ghrelin signalling system is involved in the consumption of sweets. Landgren S et al. 2011 PloS one
23227170 Ghrelin influences novelty seeking behavior in rodents and men. Hansson C et al. 2012 PloS one
25278825 Gut-brain peptides in corticostriatal-limbic circuitry and alcohol use disorders. Vadnie CA et al. 2014 Frontiers in neuroscience
Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top▲ Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post820+afb47a3d