Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

dbSNP Short Genetic Variations

Welcome to the Reference SNP (rs) Report

All alleles are reported in the Forward orientation. Click on the Variant Details tab for details on Genomic Placement, Gene, and Amino Acid changes. HGVS names are in the HGVS tab.

Reference SNP (rs) Report

This page reports data for a single dbSNP Reference SNP variation (RefSNP or rs) from the new redesigned dbSNP build.
Top of the page reports a concise summary for the rs, with more specific details included in the corresponding tabs below.
All alleles are reported in the Forward orientation. Use the Genomic View to inspect the nucleotides flanking the variant, and its neighbors.
For more information see Help documentation.

rs33942248

Current Build 156

Released September 21, 2022

Organism
Homo sapiens
Position
chr10:70824969-70824983 (GRCh38.p14) Help

The anchor position for this RefSNP. Includes all nucleotides potentially affected by this change, thus it can differ from HGVS, which is right-shifted. See here for details.

Alleles
delTTT / delTT / delT / dupT / dup…

delTTT / delTT / delT / dupT / dupTT / dupTTT / dup(T)4 / dup(T)10

Variation Type
Indel Insertion and Deletion
Frequency
delTT=0.0 (0/4, ALFA)
delT=0.0 (0/4, ALFA)
dupT=0.0 (0/4, ALFA) (+ 3 more)
dupTT=0.0 (0/4, ALFA)
dupTTT=0.0 (0/4, ALFA)
dup(T)4=0.0 (0/4, ALFA)
Clinical Significance
Not Reported in ClinVar
Gene : Consequence
SGPL1 : Intron Variant
Publications
0 citations
Genomic View
See rs on genome

ALFA Allele Frequency
The ALFA project provide aggregate allele frequency from dbGaP. More information is available on the project page including descriptions, data access, and terms of use.

Release Version: 20231103111315
Population Group Sample Size Ref Allele Alt Allele Ref HMOZ Alt HMOZ HTRZ HWEP
Total Global 4 TTTTTTTTTTTTTTT=1.0 TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTT=0.0 1.0 0.0 0.0 N/A
European Sub 0 TTTTTTTTTTTTTTT=0 TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTT=0 0 0 0 N/A
African Sub 4 TTTTTTTTTTTTTTT=1.0 TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTT=0.0 1.0 0.0 0.0 N/A
African Others Sub 0 TTTTTTTTTTTTTTT=0 TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTT=0 0 0 0 N/A
African American Sub 4 TTTTTTTTTTTTTTT=1.0 TTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTT=0.0, TTTTTTTTTTTTTTTTTTT=0.0 1.0 0.0 0.0 N/A
Asian Sub 0 TTTTTTTTTTTTTTT=0 TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTT=0 0 0 0 N/A
East Asian Sub 0 TTTTTTTTTTTTTTT=0 TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTT=0 0 0 0 N/A
Other Asian Sub 0 TTTTTTTTTTTTTTT=0 TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTT=0 0 0 0 N/A
Latin American 1 Sub 0 TTTTTTTTTTTTTTT=0 TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTT=0 0 0 0 N/A
Latin American 2 Sub 0 TTTTTTTTTTTTTTT=0 TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTT=0 0 0 0 N/A
South Asian Sub 0 TTTTTTTTTTTTTTT=0 TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTT=0 0 0 0 N/A
Other Sub 0 TTTTTTTTTTTTTTT=0 TTTTTTTTTTTTT=0, TTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTT=0, TTTTTTTTTTTTTTTTTTT=0 0 0 0 N/A


Help

Frequency tab displays a table of the reference and alternate allele frequencies reported by various studies and populations. Table lines, where Population="Global" refer to the entire study population, whereas lines, where Group="Sub", refer to a study-specific population subgroupings (i.e. AFR, CAU, etc.), if available. Frequency for the alternate allele (Alt Allele) is a ratio of samples observed-to-total, where the numerator (observed samples) is the number of chromosomes in the study with the minor allele present (found in "Sample size", where Group="Sub"), and the denominator (total samples) is the total number of all chromosomes in the study for the variant (found in "Sample size", where Group="Study-wide" and Population="Global").

Download
Study Population Group Sample Size Ref Allele Alt Allele
Allele Frequency Aggregator Total Global 4 (T)15=1.0 delTT=0.0, delT=0.0, dupT=0.0, dupTT=0.0, dupTTT=0.0, dup(T)4=0.0
Allele Frequency Aggregator African Sub 4 (T)15=1.0 delTT=0.0, delT=0.0, dupT=0.0, dupTT=0.0, dupTTT=0.0, dup(T)4=0.0
Allele Frequency Aggregator European Sub 0 (T)15=0 delTT=0, delT=0, dupT=0, dupTT=0, dupTTT=0, dup(T)4=0
Allele Frequency Aggregator Latin American 1 Sub 0 (T)15=0 delTT=0, delT=0, dupT=0, dupTT=0, dupTTT=0, dup(T)4=0
Allele Frequency Aggregator Latin American 2 Sub 0 (T)15=0 delTT=0, delT=0, dupT=0, dupTT=0, dupTTT=0, dup(T)4=0
Allele Frequency Aggregator South Asian Sub 0 (T)15=0 delTT=0, delT=0, dupT=0, dupTT=0, dupTTT=0, dup(T)4=0
Allele Frequency Aggregator Other Sub 0 (T)15=0 delTT=0, delT=0, dupT=0, dupTT=0, dupTTT=0, dup(T)4=0
Allele Frequency Aggregator Asian Sub 0 (T)15=0 delTT=0, delT=0, dupT=0, dupTT=0, dupTTT=0, dup(T)4=0
Help

Variant Details tab shows known variant placements on genomic sequences: chromosomes (NC_), RefSeqGene, pseudogenes or genomic regions (NG_), and in a separate table: on transcripts (NM_) and protein sequences (NP_). The corresponding transcript and protein locations are listed in adjacent lines, along with molecular consequences from Sequence Ontology. When no protein placement is available, only the transcript is listed. Column "Codon[Amino acid]" shows the actual base change in the format of "Reference > Alternate" allele, including the nucleotide codon change in transcripts, and the amino acid change in proteins, respectively, allowing for known ribosomal slippage sites. To view nucleotides adjacent to the variant use the Genomic View at the bottom of the page - zoom into the sequence until the nucleotides around the variant become visible.

Genomic Placements
Sequence name Change
GRCh38.p14 chr 10 NC_000010.11:g.70824981_70824983del
GRCh38.p14 chr 10 NC_000010.11:g.70824982_70824983del
GRCh38.p14 chr 10 NC_000010.11:g.70824983del
GRCh38.p14 chr 10 NC_000010.11:g.70824983dup
GRCh38.p14 chr 10 NC_000010.11:g.70824982_70824983dup
GRCh38.p14 chr 10 NC_000010.11:g.70824981_70824983dup
GRCh38.p14 chr 10 NC_000010.11:g.70824980_70824983dup
GRCh38.p14 chr 10 NC_000010.11:g.70824974_70824983dup
GRCh37.p13 chr 10 NC_000010.10:g.72584737_72584739del
GRCh37.p13 chr 10 NC_000010.10:g.72584738_72584739del
GRCh37.p13 chr 10 NC_000010.10:g.72584739del
GRCh37.p13 chr 10 NC_000010.10:g.72584739dup
GRCh37.p13 chr 10 NC_000010.10:g.72584738_72584739dup
GRCh37.p13 chr 10 NC_000010.10:g.72584737_72584739dup
GRCh37.p13 chr 10 NC_000010.10:g.72584736_72584739dup
GRCh37.p13 chr 10 NC_000010.10:g.72584730_72584739dup
Gene: SGPL1, sphingosine-1-phosphate lyase 1 (plus strand)
Molecule type Change Amino acid[Codon] SO Term
SGPL1 transcript NM_003901.4:c.27+8101_27+…

NM_003901.4:c.27+8101_27+8103del

N/A Intron Variant
SGPL1 transcript variant X1 XM_005270263.2:c.27+8101_…

XM_005270263.2:c.27+8101_27+8103del

N/A Intron Variant
SGPL1 transcript variant X4 XM_011540316.3:c.27+8101_…

XM_011540316.3:c.27+8101_27+8103del

N/A Intron Variant
SGPL1 transcript variant X3 XM_011540317.2:c.27+8101_…

XM_011540317.2:c.27+8101_27+8103del

N/A Intron Variant
SGPL1 transcript variant X5 XM_011540318.2:c.-214+885…

XM_011540318.2:c.-214+8855_-214+8857del

N/A Intron Variant
SGPL1 transcript variant X2 XM_047425981.1:c.27+8101_…

XM_047425981.1:c.27+8101_27+8103del

N/A Intron Variant
SGPL1 transcript variant X6 XM_047425982.1:c.27+8101_…

XM_047425982.1:c.27+8101_27+8103del

N/A Intron Variant
Help

Clinical Significance tab shows a list of clinical significance entries from ClinVar associated with the variation, per allele. Click on the RCV accession (i.e. RCV000001615.2) or Allele ID (i.e. 12274) to access full ClinVar report.

Not Reported in ClinVar
Help

Aliases tab displays HGVS names representing the variant placements and allele changes on genomic, transcript and protein sequences, per allele. HGVS name is an expression for reporting sequence accession and version, sequence type, position, and allele change. The column "Note" can have two values: "diff" means that there is a difference between the reference allele (variation interval) at the placement reported in HGVS name and the reference alleles reported in other HGVS names, and "rev" means that the sequence of this variation interval at the placement reported in HGVS name is in reverse orientation to the sequence(s) of this variation in other HGVS names not labeled as "rev".

Placement (T)15= delTTT delTT delT dupT dupTT dupTTT dup(T)4 dup(T)10
GRCh38.p14 chr 10 NC_000010.11:g.70824969_70824983= NC_000010.11:g.70824981_70824983del NC_000010.11:g.70824982_70824983del NC_000010.11:g.70824983del NC_000010.11:g.70824983dup NC_000010.11:g.70824982_70824983dup NC_000010.11:g.70824981_70824983dup NC_000010.11:g.70824980_70824983dup NC_000010.11:g.70824974_70824983dup
GRCh37.p13 chr 10 NC_000010.10:g.72584725_72584739= NC_000010.10:g.72584737_72584739del NC_000010.10:g.72584738_72584739del NC_000010.10:g.72584739del NC_000010.10:g.72584739dup NC_000010.10:g.72584738_72584739dup NC_000010.10:g.72584737_72584739dup NC_000010.10:g.72584736_72584739dup NC_000010.10:g.72584730_72584739dup
SGPL1 transcript NM_003901.3:c.27+8089= NM_003901.3:c.27+8101_27+8103del NM_003901.3:c.27+8102_27+8103del NM_003901.3:c.27+8103del NM_003901.3:c.27+8103dup NM_003901.3:c.27+8102_27+8103dup NM_003901.3:c.27+8101_27+8103dup NM_003901.3:c.27+8100_27+8103dup NM_003901.3:c.27+8094_27+8103dup
SGPL1 transcript NM_003901.4:c.27+8089= NM_003901.4:c.27+8101_27+8103del NM_003901.4:c.27+8102_27+8103del NM_003901.4:c.27+8103del NM_003901.4:c.27+8103dup NM_003901.4:c.27+8102_27+8103dup NM_003901.4:c.27+8101_27+8103dup NM_003901.4:c.27+8100_27+8103dup NM_003901.4:c.27+8094_27+8103dup
SGPL1 transcript variant X1 XM_005270263.1:c.27+8089= XM_005270263.1:c.27+8101_27+8103del XM_005270263.1:c.27+8102_27+8103del XM_005270263.1:c.27+8103del XM_005270263.1:c.27+8103dup XM_005270263.1:c.27+8102_27+8103dup XM_005270263.1:c.27+8101_27+8103dup XM_005270263.1:c.27+8100_27+8103dup XM_005270263.1:c.27+8094_27+8103dup
SGPL1 transcript variant X1 XM_005270263.2:c.27+8089= XM_005270263.2:c.27+8101_27+8103del XM_005270263.2:c.27+8102_27+8103del XM_005270263.2:c.27+8103del XM_005270263.2:c.27+8103dup XM_005270263.2:c.27+8102_27+8103dup XM_005270263.2:c.27+8101_27+8103dup XM_005270263.2:c.27+8100_27+8103dup XM_005270263.2:c.27+8094_27+8103dup
SGPL1 transcript variant X4 XM_011540316.3:c.27+8089= XM_011540316.3:c.27+8101_27+8103del XM_011540316.3:c.27+8102_27+8103del XM_011540316.3:c.27+8103del XM_011540316.3:c.27+8103dup XM_011540316.3:c.27+8102_27+8103dup XM_011540316.3:c.27+8101_27+8103dup XM_011540316.3:c.27+8100_27+8103dup XM_011540316.3:c.27+8094_27+8103dup
SGPL1 transcript variant X3 XM_011540317.2:c.27+8089= XM_011540317.2:c.27+8101_27+8103del XM_011540317.2:c.27+8102_27+8103del XM_011540317.2:c.27+8103del XM_011540317.2:c.27+8103dup XM_011540317.2:c.27+8102_27+8103dup XM_011540317.2:c.27+8101_27+8103dup XM_011540317.2:c.27+8100_27+8103dup XM_011540317.2:c.27+8094_27+8103dup
SGPL1 transcript variant X5 XM_011540318.2:c.-214+8843= XM_011540318.2:c.-214+8855_-214+8857del XM_011540318.2:c.-214+8856_-214+8857del XM_011540318.2:c.-214+8857del XM_011540318.2:c.-214+8857dup XM_011540318.2:c.-214+8856_-214+8857dup XM_011540318.2:c.-214+8855_-214+8857dup XM_011540318.2:c.-214+8854_-214+8857dup XM_011540318.2:c.-214+8848_-214+8857dup
SGPL1 transcript variant X2 XM_047425981.1:c.27+8089= XM_047425981.1:c.27+8101_27+8103del XM_047425981.1:c.27+8102_27+8103del XM_047425981.1:c.27+8103del XM_047425981.1:c.27+8103dup XM_047425981.1:c.27+8102_27+8103dup XM_047425981.1:c.27+8101_27+8103dup XM_047425981.1:c.27+8100_27+8103dup XM_047425981.1:c.27+8094_27+8103dup
SGPL1 transcript variant X6 XM_047425982.1:c.27+8089= XM_047425982.1:c.27+8101_27+8103del XM_047425982.1:c.27+8102_27+8103del XM_047425982.1:c.27+8103del XM_047425982.1:c.27+8103dup XM_047425982.1:c.27+8102_27+8103dup XM_047425982.1:c.27+8101_27+8103dup XM_047425982.1:c.27+8100_27+8103dup XM_047425982.1:c.27+8094_27+8103dup
Help

Submissions tab displays variations originally submitted to dbSNP, now supporting this RefSNP cluster (rs). We display Submitter handle, Submission identifier, Date and Build number, when the submission appeared for the first time. Direct submissions to dbSNP have Submission ID in the form of an ss-prefixed number (ss#). Other supporting variations are listed in the table without ss#.

45 SubSNP, 18 Frequency submissions
No Submitter Submission ID Date (Build)
1 ABI ss39771293 Mar 13, 2006 (126)
2 ABI ss39816402 Mar 13, 2006 (126)
3 HUMANGENOME_JCVI ss95545372 Oct 12, 2018 (152)
4 GMI ss289022649 Oct 12, 2018 (152)
5 PJP ss294663335 May 09, 2011 (134)
6 PJP ss294663336 May 09, 2011 (137)
7 PJP ss294663337 Oct 12, 2018 (152)
8 BILGI_BIOE ss666507142 Apr 25, 2013 (138)
9 EVA_UK10K_ALSPAC ss1706793459 Apr 01, 2015 (144)
10 EVA_UK10K_ALSPAC ss1706793461 Apr 01, 2015 (144)
11 EVA_UK10K_TWINSUK ss1706793625 Apr 01, 2015 (144)
12 EVA_UK10K_TWINSUK ss1706793628 Apr 01, 2015 (144)
13 SWEGEN ss3006692954 Nov 08, 2017 (151)
14 SWEGEN ss3006692955 Nov 08, 2017 (151)
15 SWEGEN ss3006692956 Nov 08, 2017 (151)
16 URBANLAB ss3649404782 Oct 12, 2018 (152)
17 EVA_DECODE ss3690138854 Jul 13, 2019 (153)
18 EVA_DECODE ss3690138855 Jul 13, 2019 (153)
19 EVA_DECODE ss3690138856 Jul 13, 2019 (153)
20 EVA_DECODE ss3690138857 Jul 13, 2019 (153)
21 EVA_DECODE ss3690138858 Jul 13, 2019 (153)
22 EVA_DECODE ss3690138859 Jul 13, 2019 (153)
23 PACBIO ss3786711503 Jul 13, 2019 (153)
24 PACBIO ss3791886871 Jul 13, 2019 (153)
25 PACBIO ss3796768904 Jul 13, 2019 (153)
26 EVA ss3832195046 Apr 26, 2020 (154)
27 GNOMAD ss4220761566 Apr 26, 2021 (155)
28 GNOMAD ss4220761567 Apr 26, 2021 (155)
29 GNOMAD ss4220761568 Apr 26, 2021 (155)
30 GNOMAD ss4220761569 Apr 26, 2021 (155)
31 GNOMAD ss4220761571 Apr 26, 2021 (155)
32 GNOMAD ss4220761572 Apr 26, 2021 (155)
33 GNOMAD ss4220761573 Apr 26, 2021 (155)
34 TOMMO_GENOMICS ss5198214630 Apr 26, 2021 (155)
35 TOMMO_GENOMICS ss5198214631 Apr 26, 2021 (155)
36 TOMMO_GENOMICS ss5198214632 Apr 26, 2021 (155)
37 1000G_HIGH_COVERAGE ss5284505588 Oct 16, 2022 (156)
38 1000G_HIGH_COVERAGE ss5284505589 Oct 16, 2022 (156)
39 HUGCELL_USP ss5480037526 Oct 16, 2022 (156)
40 HUGCELL_USP ss5480037527 Oct 16, 2022 (156)
41 TOMMO_GENOMICS ss5744213736 Oct 16, 2022 (156)
42 TOMMO_GENOMICS ss5744213737 Oct 16, 2022 (156)
43 TOMMO_GENOMICS ss5744213739 Oct 16, 2022 (156)
44 EVA ss5824579197 Oct 16, 2022 (156)
45 EVA ss5824579198 Oct 16, 2022 (156)
46 The Avon Longitudinal Study of Parents and Children

Submission ignored due to conflicting rows:
Row 27956648 (NC_000010.10:72584724::T 3213/3854)
Row 27956649 (NC_000010.10:72584724::TT 641/3854)

- Oct 12, 2018 (152)
47 The Avon Longitudinal Study of Parents and Children

Submission ignored due to conflicting rows:
Row 27956648 (NC_000010.10:72584724::T 3213/3854)
Row 27956649 (NC_000010.10:72584724::TT 641/3854)

- Oct 12, 2018 (152)
48 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 355934054 (NC_000010.11:70824968::T 108826/129956)
Row 355934055 (NC_000010.11:70824968::TT 17877/129882)
Row 355934056 (NC_000010.11:70824968::TTT 40/129942)...

- Apr 26, 2021 (155)
49 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 355934054 (NC_000010.11:70824968::T 108826/129956)
Row 355934055 (NC_000010.11:70824968::TT 17877/129882)
Row 355934056 (NC_000010.11:70824968::TTT 40/129942)...

- Apr 26, 2021 (155)
50 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 355934054 (NC_000010.11:70824968::T 108826/129956)
Row 355934055 (NC_000010.11:70824968::TT 17877/129882)
Row 355934056 (NC_000010.11:70824968::TTT 40/129942)...

- Apr 26, 2021 (155)
51 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 355934054 (NC_000010.11:70824968::T 108826/129956)
Row 355934055 (NC_000010.11:70824968::TT 17877/129882)
Row 355934056 (NC_000010.11:70824968::TTT 40/129942)...

- Apr 26, 2021 (155)
52 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 355934054 (NC_000010.11:70824968::T 108826/129956)
Row 355934055 (NC_000010.11:70824968::TT 17877/129882)
Row 355934056 (NC_000010.11:70824968::TTT 40/129942)...

- Apr 26, 2021 (155)
53 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 355934054 (NC_000010.11:70824968::T 108826/129956)
Row 355934055 (NC_000010.11:70824968::TT 17877/129882)
Row 355934056 (NC_000010.11:70824968::TTT 40/129942)...

- Apr 26, 2021 (155)
54 gnomAD - Genomes

Submission ignored due to conflicting rows:
Row 355934054 (NC_000010.11:70824968::T 108826/129956)
Row 355934055 (NC_000010.11:70824968::TT 17877/129882)
Row 355934056 (NC_000010.11:70824968::TTT 40/129942)...

- Apr 26, 2021 (155)
55 8.3KJPN

Submission ignored due to conflicting rows:
Row 56183937 (NC_000010.10:72584724::T 15629/16716)
Row 56183938 (NC_000010.10:72584724::TT 970/16716)
Row 56183939 (NC_000010.10:72584724::TTT 4/16716)

- Apr 26, 2021 (155)
56 8.3KJPN

Submission ignored due to conflicting rows:
Row 56183937 (NC_000010.10:72584724::T 15629/16716)
Row 56183938 (NC_000010.10:72584724::TT 970/16716)
Row 56183939 (NC_000010.10:72584724::TTT 4/16716)

- Apr 26, 2021 (155)
57 8.3KJPN

Submission ignored due to conflicting rows:
Row 56183937 (NC_000010.10:72584724::T 15629/16716)
Row 56183938 (NC_000010.10:72584724::TT 970/16716)
Row 56183939 (NC_000010.10:72584724::TTT 4/16716)

- Apr 26, 2021 (155)
58 14KJPN

Submission ignored due to conflicting rows:
Row 78050840 (NC_000010.11:70824968::T 26454/28258)
Row 78050841 (NC_000010.11:70824968::TT 1650/28258)
Row 78050843 (NC_000010.11:70824968::TTT 4/28258)

- Oct 16, 2022 (156)
59 14KJPN

Submission ignored due to conflicting rows:
Row 78050840 (NC_000010.11:70824968::T 26454/28258)
Row 78050841 (NC_000010.11:70824968::TT 1650/28258)
Row 78050843 (NC_000010.11:70824968::TTT 4/28258)

- Oct 16, 2022 (156)
60 14KJPN

Submission ignored due to conflicting rows:
Row 78050840 (NC_000010.11:70824968::T 26454/28258)
Row 78050841 (NC_000010.11:70824968::TT 1650/28258)
Row 78050843 (NC_000010.11:70824968::TTT 4/28258)

- Oct 16, 2022 (156)
61 UK 10K study - Twins

Submission ignored due to conflicting rows:
Row 27956648 (NC_000010.10:72584724::T 3072/3708)
Row 27956649 (NC_000010.10:72584724::TT 636/3708)

- Oct 12, 2018 (152)
62 UK 10K study - Twins

Submission ignored due to conflicting rows:
Row 27956648 (NC_000010.10:72584724::T 3072/3708)
Row 27956649 (NC_000010.10:72584724::TT 636/3708)

- Oct 12, 2018 (152)
63 ALFA NC_000010.11 - 70824969 Apr 26, 2021 (155)
Help

History tab displays RefSNPs (Associated ID) from previous builds (Build) that now support the current RefSNP, and the dates, when the history was updated for each Associated ID (History Updated).

Associated ID History Updated (Build)
rs147264191 May 11, 2012 (137)
Added to this RefSNP Cluster:
Submission IDs Observation SPDI Canonical SPDI Source RSIDs
ss4220761573 NC_000010.11:70824968:TTT: NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTT

(self)
ss3690138854, ss4220761572 NC_000010.11:70824968:TT: NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTT

(self)
6917402182 NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTT

NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTT

(self)
ss4220761571 NC_000010.11:70824968:T: NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT

(self)
6917402182 NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT

NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT

(self)
ss3690138855 NC_000010.11:70824969:T: NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT

(self)
ss294663335 NC_000010.9:72254731::T NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT

(self)
ss289022649, ss294663337 NC_000010.9:72254745::T NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT

(self)
ss666507142, ss1706793459, ss1706793625, ss3006692954, ss3786711503, ss3791886871, ss3796768904, ss3832195046, ss5198214630, ss5824579197 NC_000010.10:72584724::T NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT

(self)
ss4220761566, ss5284505588, ss5480037526, ss5744213736 NC_000010.11:70824968::T NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT

(self)
6917402182 NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT

NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT

(self)
ss3690138856 NC_000010.11:70824970::T NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT

(self)
ss39771293, ss39816402 NT_030059.13:23389188::T NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT

(self)
ss294663336 NC_000010.9:72254744::TT NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT

(self)
ss289022649 NC_000010.9:72254745::TT NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT

(self)
ss1706793461, ss1706793628, ss3006692955, ss5198214631, ss5824579198 NC_000010.10:72584724::TT NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT

(self)
ss3649404782, ss4220761567, ss5284505589, ss5480037527, ss5744213737 NC_000010.11:70824968::TT NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT

(self)
6917402182 NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT

NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT

(self)
ss3690138857 NC_000010.11:70824970::TT NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT

(self)
ss95545372 NT_030059.13:23389203::TT NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT

(self)
ss5198214632 NC_000010.10:72584724::TTT NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT

(self)
ss4220761568, ss5744213739 NC_000010.11:70824968::TTT NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT

(self)
6917402182 NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT

NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT

(self)
ss3690138858 NC_000010.11:70824970::TTT NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT

(self)
ss3006692956 NC_000010.10:72584724::TTTT NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT

(self)
ss4220761569 NC_000010.11:70824968::TTTT NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT

(self)
6917402182 NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT

NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT

(self)
ss3690138859 NC_000010.11:70824970::TTTTTTTTTT NC_000010.11:70824968:TTTTTTTTTTTT…

NC_000010.11:70824968:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT

(self)
Help

Publications tab displays PubMed articles citing the variation as a listing of PMID, Title, Author, Year, Journal, ordered by Year, descending.

No publications for rs33942248

Help

The Flanks tab provides retrieving flanking sequences of a SNP on all molecules that have placements.

Genome context:
Select flank length:

Genomic regions, transcripts, and products
Top Help

NCBI Graphical Sequence Viewer display of the genomic region, transcripts and protein products for the reported RefSNP (rs).
Use the zoom option to view the nucleotides around the RefSNP and find other neighboring RefSNPs.
Visit Sequence Viewer for help with navigating inside the display and modifying the selection of displayed data tracks.

Software version is: 2.0.1.post820+afb47a3d