SNP Links for Gene (Select 100113403) - SNP

Links from Gene

Items: 1 to 20 of 1633

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Select item 14909796131.

rs1490979613 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:104940633 (GRCh38)
6:105388508 (GRCh37)
Canonical SPDI:: NC_000006.12:104940632:C:T
Gene:: LIN28B (Varview), LIN28B-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.104940633C>T, NC_000006.11:g.105388508C>T

Select item 14906224652.

rs1490622465 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 6:104936512 (GRCh38)
6:105384387 (GRCh37)
Canonical SPDI:: NC_000006.12:104936511:A:T
Gene:: LIN28B (Varview), LIN28B-AS1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000015/4 (TOPMED)
HGVS:: NC_000006.12:g.104936512A>T, NC_000006.11:g.105384387A>T, NR_046407.1:n.357T>A

Select item 14904382003.

rs1490438200 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:104937198 (GRCh38)
6:105385073 (GRCh37)
Canonical SPDI:: NC_000006.12:104937197:G:A
Gene:: LIN28B (Varview), LIN28B-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.104937198G>A, NC_000006.11:g.105385073G>A

Select item 14899503864.

rs1489950386 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:104936129 (GRCh38)
6:105384004 (GRCh37)
Canonical SPDI:: NC_000006.12:104936128:C:T
Gene:: LIN28B (Varview), LIN28B-AS1 (Varview)
Functional Consequence:: downstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000015/4 (TOPMED)
HGVS:: NC_000006.12:g.104936129C>T, NC_000006.11:g.105384004C>T

Select item 14888685315.

rs1488868531 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:104942268 (GRCh38)
6:105390143 (GRCh37)
Canonical SPDI:: NC_000006.12:104942267:T:C
Gene:: LIN28B (Varview), LIN28B-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000006.12:g.104942268T>C, NC_000006.11:g.105390143T>C

Select item 14887575366.

rs1488757536 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:104939409 (GRCh38)
6:105387284 (GRCh37)
Canonical SPDI:: NC_000006.12:104939408:T:C
Gene:: LIN28B (Varview), LIN28B-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000054/1 (ALFA)
C=0.000004/1 (TOPMED)
C=0.00005/7 (GnomAD)
C=0.000223/1 (Estonian)
HGVS:: NC_000006.12:g.104939409T>C, NC_000006.11:g.105387284T>C

Select item 14884286307.

rs1488428630 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 6:104942135 (GRCh38)
6:105390010 (GRCh37)
Canonical SPDI:: NC_000006.12:104942134:T:C
Gene:: LIN28B (Varview), LIN28B-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
HGVS:: NC_000006.12:g.104942135T>C, NC_000006.11:g.105390010T>C

Select item 14883267558.

rs1488326755 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 6:104941455 (GRCh38)
6:105389330 (GRCh37)
Canonical SPDI:: NC_000006.12:104941454:C:G,NC_000006.12:104941454:C:T
Gene:: LIN28B (Varview), LIN28B-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
G=0.02523/67 (KOREAN)
HGVS:: NC_000006.12:g.104941455C>G, NC_000006.12:g.104941455C>T, NC_000006.11:g.105389330C>G, NC_000006.11:g.105389330C>T

Select item 14880961239.

rs1488096123 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 6:104940437 (GRCh38)
6:105388312 (GRCh37)
Canonical SPDI:: NC_000006.12:104940436:A:G
Gene:: LIN28B (Varview), LIN28B-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,non_coding_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.104940437A>G, NC_000006.11:g.105388312A>G, NR_046407.1:n.91T>C

Select item 148791583810.

rs1487915838 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 6:104941425 (GRCh38)
6:105389300 (GRCh37)
Canonical SPDI:: NC_000006.12:104941424:C:A,NC_000006.12:104941424:C:G
Gene:: LIN28B (Varview), LIN28B-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.00016/1 (1000Genomes)
HGVS:: NC_000006.12:g.104941425C>A, NC_000006.12:g.104941425C>G, NC_000006.11:g.105389300C>A, NC_000006.11:g.105389300C>G

Select item 148781264011.

rs1487812640 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 6:104939390 (GRCh38)
6:105387265 (GRCh37)
Canonical SPDI:: NC_000006.12:104939389:G:A
Gene:: LIN28B (Varview), LIN28B-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.104939390G>A, NC_000006.11:g.105387265G>A

Select item 148766705312.

rs1487667053 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 6:104940816 (GRCh38)
6:105388691 (GRCh37)
Canonical SPDI:: NC_000006.12:104940815:T:C,NC_000006.12:104940815:T:G
Gene:: LIN28B (Varview), LIN28B-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
HGVS:: NC_000006.12:g.104940816T>C, NC_000006.12:g.104940816T>G, NC_000006.11:g.105388691T>C, NC_000006.11:g.105388691T>G

Select item 148698253713.

rs1486982537 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:104936711 (GRCh38)
6:105384586 (GRCh37)
Canonical SPDI:: NC_000006.12:104936710:C:T
Gene:: LIN28B (Varview), LIN28B-AS1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.104936711C>T, NC_000006.11:g.105384586C>T

Select item 148499933414.

rs1484999334 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 6:104936992 (GRCh38)
6:105384867 (GRCh37)
Canonical SPDI:: NC_000006.12:104936991:A:G,NC_000006.12:104936991:A:T
Gene:: LIN28B (Varview), LIN28B-AS1 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000006.12:g.104936992A>G, NC_000006.12:g.104936992A>T, NC_000006.11:g.105384867A>G, NC_000006.11:g.105384867A>T

Select item 148482573815.

rs1484825738 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:104939370 (GRCh38)
6:105387245 (GRCh37)
Canonical SPDI:: NC_000006.12:104939369:C:T
Gene:: LIN28B (Varview), LIN28B-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.104939370C>T, NC_000006.11:g.105387245C>T

Select item 148439263316.

rs1484392633 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:104940265 (GRCh38)
6:105388140 (GRCh37)
Canonical SPDI:: NC_000006.12:104940264:C:T
Gene:: LIN28B (Varview), LIN28B-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000006.12:g.104940265C>T, NC_000006.11:g.105388140C>T

Select item 148426143117.

rs1484261431 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:104937350 (GRCh38)
6:105385225 (GRCh37)
Canonical SPDI:: NC_000006.12:104937349:C:T
Gene:: LIN28B (Varview), LIN28B-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
T=0.000318/5 (TOMMO)
T=0.002396/7 (KOREAN)
HGVS:: NC_000006.12:g.104937350C>T, NC_000006.11:g.105385225C>T

Select item 148374316718.

rs1483743167 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 6:104941787 (GRCh38)
6:105389662 (GRCh37)
Canonical SPDI:: NC_000006.12:104941786:A:T
Gene:: LIN28B (Varview), LIN28B-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000006.12:g.104941787A>T, NC_000006.11:g.105389662A>T

Select item 148338222719.

rs1483382227 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 6:104938563 (GRCh38)
6:105386438 (GRCh37)
Canonical SPDI:: NC_000006.12:104938562:C:T
Gene:: LIN28B (Varview), LIN28B-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000006.12:g.104938563C>T, NC_000006.11:g.105386438C>T

Select item 148314472020.

rs1483144720 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C,T [Show Flanks]
Chromosome:: 6:104941470 (GRCh38)
6:105389345 (GRCh37)
Canonical SPDI:: NC_000006.12:104941469:G:A,NC_000006.12:104941469:G:C,NC_000006.12:104941469:G:T
Gene:: LIN28B (Varview), LIN28B-AS1 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000006.12:g.104941470G>A, NC_000006.12:g.104941470G>C, NC_000006.12:g.104941470G>T, NC_000006.11:g.105389345G>A, NC_000006.11:g.105389345G>C, NC_000006.11:g.105389345G>T

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