SNP Links for Gene (Select 100126308) - SNP

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Links from Gene

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Select item 14906342061.

rs1490634206 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 14:101064556 (GRCh38)
14:101530893 (GRCh37)
Canonical SPDI:: NC_000014.9:101064555:A:C
Gene:: MIR369 (Varview), MIR409 (Varview), MIR412 (Varview), MIR410 (Varview), MIR541 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000035/1 (TOMMO)
HGVS:: NC_000014.9:g.101064556A>C, NC_000014.8:g.101530893A>C, NR_030594.1:n.62A>C

Select item 14892932852.

rs1489293285 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:101064210 (GRCh38)
14:101530547 (GRCh37)
Canonical SPDI:: NC_000014.9:101064209:C:T
Gene:: MIR369 (Varview), MIR409 (Varview), MIR412 (Varview), MIR410 (Varview), MIR541 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.101064210C>T, NC_000014.8:g.101530547C>T

Select item 14873705053.

rs1487370505 [Homo sapiens]

Variant type:: DEL
Alleles:: G>- [Show Flanks]
Chromosome:: 14:101064007 (GRCh38)
14:101530344 (GRCh37)
Canonical SPDI:: NC_000014.9:101064006:G:
Gene:: MIR369 (Varview), MIR409 (Varview), MIR412 (Varview), MIR410 (Varview), MIR541 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.101064007del, NC_000014.8:g.101530344del

Select item 14867073144.

rs1486707314 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:101064940 (GRCh38)
14:101531277 (GRCh37)
Canonical SPDI:: NC_000014.9:101064939:G:A
Gene:: MIR369 (Varview), MIR409 (Varview), MIR412 (Varview), MIR410 (Varview), MIR656 (Varview), MIR541 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.101064940G>A, NC_000014.8:g.101531277G>A

Select item 14858029725.

rs1485802972 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:101062954 (GRCh38)
14:101529291 (GRCh37)
Canonical SPDI:: NC_000014.9:101062953:G:A
Gene:: MIR541 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.101062954G>A, NC_000014.8:g.101529291G>A

Select item 14842344416.

rs1484234441 [Homo sapiens]

Variant type:: DELINS
Alleles:: ACA>- [Show Flanks]
Chromosome:: 14:101062770 (GRCh38)
14:101529107 (GRCh37)
Canonical SPDI:: NC_000014.9:101062766:ACAACA:ACA
Gene:: MIR541 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ACAACA=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.101062767ACA[1], NC_000014.8:g.101529104ACA[1]

Select item 14839863927.

rs1483986392 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 14:101064216 (GRCh38)
14:101530553 (GRCh37)
Canonical SPDI:: NC_000014.9:101064215:C:A,NC_000014.9:101064215:C:T
Gene:: MIR369 (Varview), MIR409 (Varview), MIR412 (Varview), MIR410 (Varview), MIR541 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.101064216C>A, NC_000014.9:g.101064216C>T, NC_000014.8:g.101530553C>A, NC_000014.8:g.101530553C>T

Select item 14829957738.

rs1482995773 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 14:101063723 (GRCh38)
14:101530060 (GRCh37)
Canonical SPDI:: NC_000014.9:101063722:C:A
Gene:: MIR369 (Varview), MIR409 (Varview), MIR412 (Varview), MIR541 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.101063723C>A, NC_000014.8:g.101530060C>A

Select item 14826439669.

rs1482643966 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 14:101064116 (GRCh38)
14:101530453 (GRCh37)
Canonical SPDI:: NC_000014.9:101064115:T:A,NC_000014.9:101064115:T:C
Gene:: MIR369 (Varview), MIR409 (Varview), MIR412 (Varview), MIR410 (Varview), MIR541 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000043/6 (GnomAD)
HGVS:: NC_000014.9:g.101064116T>A, NC_000014.9:g.101064116T>C, NC_000014.8:g.101530453T>A, NC_000014.8:g.101530453T>C

Select item 148242665010.

rs1482426650 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 14:101065038 (GRCh38)
14:101531375 (GRCh37)
Canonical SPDI:: NC_000014.9:101065037:C:G
Gene:: MIR369 (Varview), MIR409 (Varview), MIR412 (Varview), MIR410 (Varview), MIR656 (Varview), MIR541 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.101065038C>G, NC_000014.8:g.101531375C>G

Select item 148181850811.

rs1481818508 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 14:101064547 (GRCh38)
14:101530884 (GRCh37)
Canonical SPDI:: NC_000014.9:101064546:G:A,NC_000014.9:101064546:G:T
Gene:: MIR369 (Varview), MIR409 (Varview), MIR412 (Varview), MIR410 (Varview), MIR541 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.101064547G>A, NC_000014.9:g.101064547G>T, NC_000014.8:g.101530884G>A, NC_000014.8:g.101530884G>T, NR_030594.1:n.53G>A, NR_030594.1:n.53G>T

Select item 148180454712.

rs1481804547 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:101064657 (GRCh38)
14:101530994 (GRCh37)
Canonical SPDI:: NC_000014.9:101064656:G:A
Gene:: MIR369 (Varview), MIR409 (Varview), MIR412 (Varview), MIR410 (Varview), MIR541 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.101064657G>A, NC_000014.8:g.101530994G>A

Select item 147431074713.

rs1474310747 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:101062606 (GRCh38)
14:101528943 (GRCh37)
Canonical SPDI:: NC_000014.9:101062605:G:A
Gene:: MIR377 (Varview), MIR541 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000021/3 (GnomAD)
HGVS:: NC_000014.9:g.101062606G>A, NC_000014.8:g.101528943G>A

Select item 147376948614.

rs1473769486 has merged into rs1156589609 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>-,T [Show Flanks]
Chromosome:: 14:101063786 (GRCh38)
14:101530123 (GRCh37)
Canonical SPDI:: NC_000014.9:101063784:TTT:T,NC_000014.9:101063784:TTT:TT
Gene:: MIR369 (Varview), MIR409 (Varview), MIR412 (Varview), MIR541 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
-=0.000014/2 (GnomAD)
HGVS:: NC_000014.9:g.101063786_101063787del, NC_000014.9:g.101063787del, NC_000014.8:g.101530123_101530124del, NC_000014.8:g.101530124del

Select item 147366416315.

rs1473664163 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:101063498 (GRCh38)
14:101529835 (GRCh37)
Canonical SPDI:: NC_000014.9:101063497:G:A
Gene:: MIR409 (Varview), MIR412 (Varview), MIR541 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.101063498G>A, NC_000014.8:g.101529835G>A

Select item 147345996516.

rs1473459965 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 14:101062656 (GRCh38)
14:101528993 (GRCh37)
Canonical SPDI:: NC_000014.9:101062655:A:G,NC_000014.9:101062655:A:T
Gene:: MIR541 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000014.9:g.101062656A>G, NC_000014.9:g.101062656A>T, NC_000014.8:g.101528993A>G, NC_000014.8:g.101528993A>T

Select item 147308358717.

rs1473083587 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 14:101064687 (GRCh38)
14:101531024 (GRCh37)
Canonical SPDI:: NC_000014.9:101064686:C:T
Gene:: MIR369 (Varview), MIR409 (Varview), MIR412 (Varview), MIR410 (Varview), MIR541 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000014.9:g.101064687C>T, NC_000014.8:g.101531024C>T

Select item 147029348718.

rs1470293487 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 14:101064526 (GRCh38)
14:101530863 (GRCh37)
Canonical SPDI:: NC_000014.9:101064525:A:C
Gene:: MIR369 (Varview), MIR409 (Varview), MIR412 (Varview), MIR410 (Varview), MIR541 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency
MAF:: C=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000014.9:g.101064526A>C, NC_000014.8:g.101530863A>C, NR_030594.1:n.32A>C

Select item 146996053319.

rs1469960533 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 14:101064816 (GRCh38)
14:101531153 (GRCh37)
Canonical SPDI:: NC_000014.9:101064815:G:A
Gene:: MIR369 (Varview), MIR409 (Varview), MIR412 (Varview), MIR410 (Varview), MIR656 (Varview), MIR541 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000014.9:g.101064816G>A, NC_000014.8:g.101531153G>A

Select item 146815540820.

rs1468155408 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C,G [Show Flanks]
Chromosome:: 14:101064510 (GRCh38)
14:101530847 (GRCh37)
Canonical SPDI:: NC_000014.9:101064509:T:A,NC_000014.9:101064509:T:C,NC_000014.9:101064509:T:G
Gene:: MIR369 (Varview), MIR409 (Varview), MIR412 (Varview), MIR410 (Varview), MIR541 (Varview)
Functional Consequence:: upstream_transcript_variant,non_coding_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
A=0.000004/1 (GnomAD_exomes)
G=0.000004/1 (TOPMED)
HGVS:: NC_000014.9:g.101064510T>A, NC_000014.9:g.101064510T>C, NC_000014.9:g.101064510T>G, NC_000014.8:g.101530847T>A, NC_000014.8:g.101530847T>C, NC_000014.8:g.101530847T>G, NR_030594.1:n.16T>A, NR_030594.1:n.16T>C, NR_030594.1:n.16T>G