Links from Gene
Items: 1 to 20 of 5953
1.
rs1491524438 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->AGAAGAGGCTGTCAGGG
[Show Flanks]
- Chromosome:
- 16:8859342
(GRCh38)
16:8953200
(GRCh37)
- Canonical SPDI:
- NC_000016.10:8859342:GAGAAGAGGCTGTCAGGG:GAGAAGAGGCTGTCAGGGAGAAGAGGCTGTCAGGG
- Gene:
- CARHSP1 (Varview), LOC100130283 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GAGAAGAGGCTGTCAGGGAGAAGAGGCTGTCAGGG=0./0
(
ALFA)
GAGAAGAGGCTGTCAGG=0.000004/1
(GnomAD_exomes)
GAGAAGAGGCTGTCAGG=0.000004/1
(TOPMED)
- HGVS:
2.
rs1491522629 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->GCTTTTTGTTTTT,GTTGTTTTT,GTTTTT,GTTTTTGTTTTT,GTTTTTTGTTTTT,GTTTTTTGTTTTTTGTTTTT
[Show Flanks]
- Chromosome:
- 16:8857264
(GRCh38)
16:8951122
(GRCh37)
- Canonical SPDI:
- NC_000016.10:8857264:TTTTT:TTTTTGCTTTTTGTTTTT,NC_000016.10:8857264:TTTTT:TTTTTGTTGTTTTT,NC_000016.10:8857264:TTTTT:TTTTTGTTTTT,NC_000016.10:8857264:TTTTT:TTTTTGTTTTTGTTTTT,NC_000016.10:8857264:TTTTT:TTTTTGTTTTTTGTTTTT,NC_000016.10:8857264:TTTTT:TTTTTGTTTTTTGTTTTTTGTTTTT
- Gene:
- CARHSP1 (Varview), LOC100130283 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTGTTTTTTGTTTTT=0./0
(
ALFA)
- HGVS:
NC_000016.10:g.8857265_8857269T[5]GCTTTTTGTTTTT[1], NC_000016.10:g.8857265_8857269T[5]GTT[2]TTT[1], NC_000016.10:g.8857265_8857269T[5]GTTTTT[1], NC_000016.10:g.8857269_8857270insGTTTTTGTTTTT, NC_000016.10:g.8857265_8857269TTTTTGT[2]T[4], NC_000016.10:g.8857265_8857269TTTTTGT[3]T[4], NC_000016.9:g.8951122_8951126T[5]GCTTTTTGTTTTT[1], NC_000016.9:g.8951122_8951126T[5]GTT[2]TTT[1], NC_000016.9:g.8951122_8951126T[5]GTTTTT[1], NC_000016.9:g.8951126_8951127insGTTTTTGTTTTT, NC_000016.9:g.8951122_8951126TTTTTGT[2]T[4], NC_000016.9:g.8951122_8951126TTTTTGT[3]T[4]
4.
rs1491390816 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->T,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTTT
[Show Flanks]
- Chromosome:
- 16:8857756
(GRCh38)
16:8951614
(GRCh37)
- Canonical SPDI:
- NC_000016.10:8857756:TT:TTT,NC_000016.10:8857756:TT:TTTT,NC_000016.10:8857756:TT:TTTTT,NC_000016.10:8857756:TT:TTTTTT,NC_000016.10:8857756:TT:TTTTTTT,NC_000016.10:8857756:TT:TTTTTTTT,NC_000016.10:8857756:TT:TTTTTTTTT,NC_000016.10:8857756:TT:TTTTTTTTTTT
- Gene:
- CARHSP1 (Varview), LOC100130283 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTT=0./0
(
ALFA)
TTT=0.00014/2
(TOMMO)
TTT=0.00074/3
(Estonian)
TTT=0.00656/42
(1000Genomes)
- HGVS:
NC_000016.10:g.8857758dup, NC_000016.10:g.8857757_8857758dup, NC_000016.10:g.8857758_8857759insTTT, NC_000016.10:g.8857758_8857759insTTTT, NC_000016.10:g.8857758_8857759insTTTTT, NC_000016.10:g.8857758_8857759insTTTTTT, NC_000016.10:g.8857758_8857759insTTTTTTT, NC_000016.10:g.8857758_8857759insTTTTTTTTT, NC_000016.9:g.8951615dup, NC_000016.9:g.8951614_8951615dup, NC_000016.9:g.8951615_8951616insTTT, NC_000016.9:g.8951615_8951616insTTTT, NC_000016.9:g.8951615_8951616insTTTTT, NC_000016.9:g.8951615_8951616insTTTTTT, NC_000016.9:g.8951615_8951616insTTTTTTT, NC_000016.9:g.8951615_8951616insTTTTTTTTT
5.
rs1491334293 has merged into rs71155409 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 16:8857769
(GRCh38)
16:8951626
(GRCh37)
- Canonical SPDI:
- NC_000016.10:8857759:TTTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000016.10:8857759:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000016.10:8857759:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000016.10:8857759:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000016.10:8857759:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000016.10:8857759:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000016.10:8857759:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000016.10:8857759:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000016.10:8857759:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000016.10:8857759:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000016.10:8857759:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857759:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857759:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857759:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857759:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857759:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857759:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857759:TTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- CARHSP1 (Varview), LOC100130283 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000016.10:g.8857769_8857778del, NC_000016.10:g.8857770_8857778del, NC_000016.10:g.8857771_8857778del, NC_000016.10:g.8857772_8857778del, NC_000016.10:g.8857773_8857778del, NC_000016.10:g.8857774_8857778del, NC_000016.10:g.8857775_8857778del, NC_000016.10:g.8857776_8857778del, NC_000016.10:g.8857777_8857778del, NC_000016.10:g.8857778del, NC_000016.10:g.8857778dup, NC_000016.10:g.8857777_8857778dup, NC_000016.10:g.8857776_8857778dup, NC_000016.10:g.8857775_8857778dup, NC_000016.10:g.8857774_8857778dup, NC_000016.10:g.8857773_8857778dup, NC_000016.10:g.8857772_8857778dup, NC_000016.10:g.8857771_8857778dup, NC_000016.9:g.8951626_8951635del, NC_000016.9:g.8951627_8951635del, NC_000016.9:g.8951628_8951635del, NC_000016.9:g.8951629_8951635del, NC_000016.9:g.8951630_8951635del, NC_000016.9:g.8951631_8951635del, NC_000016.9:g.8951632_8951635del, NC_000016.9:g.8951633_8951635del, NC_000016.9:g.8951634_8951635del, NC_000016.9:g.8951635del, NC_000016.9:g.8951635dup, NC_000016.9:g.8951634_8951635dup, NC_000016.9:g.8951633_8951635dup, NC_000016.9:g.8951632_8951635dup, NC_000016.9:g.8951631_8951635dup, NC_000016.9:g.8951630_8951635dup, NC_000016.9:g.8951629_8951635dup, NC_000016.9:g.8951628_8951635dup
6.
rs1491310218 has merged into rs756390920 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTTTTTTTTTTTTTTTTTTTT>-,T,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 16:8857271
(GRCh38)
16:8951128
(GRCh37)
- Canonical SPDI:
- NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000016.10:8857263:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- CARHSP1 (Varview), LOC100130283 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000016.10:g.8857271_8857299del, NC_000016.10:g.8857272_8857299del, NC_000016.10:g.8857273_8857299del, NC_000016.10:g.8857274_8857299del, NC_000016.10:g.8857275_8857299del, NC_000016.10:g.8857276_8857299del, NC_000016.10:g.8857277_8857299del, NC_000016.10:g.8857278_8857299del, NC_000016.10:g.8857279_8857299del, NC_000016.10:g.8857280_8857299del, NC_000016.10:g.8857281_8857299del, NC_000016.10:g.8857282_8857299del, NC_000016.10:g.8857283_8857299del, NC_000016.10:g.8857284_8857299del, NC_000016.10:g.8857285_8857299del, NC_000016.10:g.8857286_8857299del, NC_000016.10:g.8857287_8857299del, NC_000016.10:g.8857288_8857299del, NC_000016.10:g.8857289_8857299del, NC_000016.10:g.8857290_8857299del, NC_000016.10:g.8857291_8857299del, NC_000016.10:g.8857292_8857299del, NC_000016.10:g.8857293_8857299del, NC_000016.10:g.8857294_8857299del, NC_000016.10:g.8857295_8857299del, NC_000016.10:g.8857296_8857299del, NC_000016.10:g.8857297_8857299del, NC_000016.10:g.8857298_8857299del, NC_000016.10:g.8857299del, NC_000016.10:g.8857299dup, NC_000016.10:g.8857298_8857299dup, NC_000016.10:g.8857297_8857299dup, NC_000016.10:g.8857296_8857299dup, NC_000016.10:g.8857295_8857299dup, NC_000016.10:g.8857294_8857299dup, NC_000016.10:g.8857293_8857299dup, NC_000016.10:g.8857292_8857299dup, NC_000016.10:g.8857291_8857299dup, NC_000016.10:g.8857290_8857299dup, NC_000016.10:g.8857289_8857299dup, NC_000016.10:g.8857288_8857299dup, NC_000016.10:g.8857287_8857299dup, NC_000016.10:g.8857286_8857299dup, NC_000016.10:g.8857285_8857299dup, NC_000016.10:g.8857284_8857299dup, NC_000016.10:g.8857283_8857299dup, NC_000016.10:g.8857282_8857299dup, NC_000016.10:g.8857281_8857299dup, NC_000016.10:g.8857280_8857299dup, NC_000016.10:g.8857279_8857299dup, NC_000016.10:g.8857278_8857299dup, NC_000016.10:g.8857277_8857299dup, NC_000016.10:g.8857276_8857299dup, NC_000016.10:g.8857275_8857299dup, NC_000016.10:g.8857274_8857299dup, NC_000016.10:g.8857273_8857299dup, NC_000016.10:g.8857272_8857299dup, NC_000016.10:g.8857268_8857299dup, NC_000016.10:g.8857299_8857300insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000016.10:g.8857299_8857300insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000016.10:g.8857299_8857300insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000016.9:g.8951128_8951156del, NC_000016.9:g.8951129_8951156del, NC_000016.9:g.8951130_8951156del, NC_000016.9:g.8951131_8951156del, NC_000016.9:g.8951132_8951156del, NC_000016.9:g.8951133_8951156del, NC_000016.9:g.8951134_8951156del, NC_000016.9:g.8951135_8951156del, NC_000016.9:g.8951136_8951156del, NC_000016.9:g.8951137_8951156del, NC_000016.9:g.8951138_8951156del, NC_000016.9:g.8951139_8951156del, NC_000016.9:g.8951140_8951156del, NC_000016.9:g.8951141_8951156del, NC_000016.9:g.8951142_8951156del, NC_000016.9:g.8951143_8951156del, NC_000016.9:g.8951144_8951156del, NC_000016.9:g.8951145_8951156del, NC_000016.9:g.8951146_8951156del, NC_000016.9:g.8951147_8951156del, NC_000016.9:g.8951148_8951156del, NC_000016.9:g.8951149_8951156del, NC_000016.9:g.8951150_8951156del, NC_000016.9:g.8951151_8951156del, NC_000016.9:g.8951152_8951156del, NC_000016.9:g.8951153_8951156del, NC_000016.9:g.8951154_8951156del, NC_000016.9:g.8951155_8951156del, NC_000016.9:g.8951156del, NC_000016.9:g.8951156dup, NC_000016.9:g.8951155_8951156dup, NC_000016.9:g.8951154_8951156dup, NC_000016.9:g.8951153_8951156dup, NC_000016.9:g.8951152_8951156dup, NC_000016.9:g.8951151_8951156dup, NC_000016.9:g.8951150_8951156dup, NC_000016.9:g.8951149_8951156dup, NC_000016.9:g.8951148_8951156dup, NC_000016.9:g.8951147_8951156dup, NC_000016.9:g.8951146_8951156dup, NC_000016.9:g.8951145_8951156dup, NC_000016.9:g.8951144_8951156dup, NC_000016.9:g.8951143_8951156dup, NC_000016.9:g.8951142_8951156dup, NC_000016.9:g.8951141_8951156dup, NC_000016.9:g.8951140_8951156dup, NC_000016.9:g.8951139_8951156dup, NC_000016.9:g.8951138_8951156dup, NC_000016.9:g.8951137_8951156dup, NC_000016.9:g.8951136_8951156dup, NC_000016.9:g.8951135_8951156dup, NC_000016.9:g.8951134_8951156dup, NC_000016.9:g.8951133_8951156dup, NC_000016.9:g.8951132_8951156dup, NC_000016.9:g.8951131_8951156dup, NC_000016.9:g.8951130_8951156dup, NC_000016.9:g.8951129_8951156dup, NC_000016.9:g.8951125_8951156dup, NC_000016.9:g.8951156_8951157insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000016.9:g.8951156_8951157insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000016.9:g.8951156_8951157insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
9.
rs1490864807 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 16:8852280
(GRCh38)
16:8946137
(GRCh37)
- Canonical SPDI:
- NC_000016.10:8852279:C:T
- Gene:
- LOC100130283 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
T=0.000008/2
(TOPMED)
- HGVS:
10.
rs1490797581 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A,G
[Show Flanks]
- Chromosome:
- 16:8857872
(GRCh38)
16:8951729
(GRCh37)
- Canonical SPDI:
- NC_000016.10:8857871:C:A,NC_000016.10:8857871:C:G
- Gene:
- CARHSP1 (Varview), LOC100130283 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000007/1
(GnomAD)
A=0.000035/1
(TOMMO)
- HGVS:
11.
rs1490745206 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 16:8855824
(GRCh38)
16:8949681
(GRCh37)
- Canonical SPDI:
- NC_000016.10:8855823:C:T
- Gene:
- CARHSP1 (Varview), LOC100130283 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
T=0.000011/3
(TOPMED)
- HGVS:
12.
rs1490635067 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A,T
[Show Flanks]
- Chromosome:
- 16:8858297
(GRCh38)
16:8952154
(GRCh37)
- Canonical SPDI:
- NC_000016.10:8858296:G:A,NC_000016.10:8858296:G:T
- Gene:
- CARHSP1 (Varview), LOC100130283 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
T=0.000008/2
(TOPMED)
A=0.000106/2
(TOMMO)
- HGVS:
13.
rs1490465987 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 16:8847754
(GRCh38)
16:8941611
(GRCh37)
- Canonical SPDI:
- NC_000016.10:8847753:C:T
- Gene:
- PMM2 (Varview), LOC100130283 (Varview)
- Functional Consequence:
- coding_sequence_variant,2KB_upstream_variant,missense_variant,upstream_transcript_variant
- Validated:
- by frequency
- MAF:
T=0.000004/1
(GnomAD_exomes)
- HGVS:
14.
rs1490373558 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- G>-
[Show Flanks]
- Chromosome:
- 16:8852006
(GRCh38)
16:8945863
(GRCh37)
- Canonical SPDI:
- NC_000016.10:8852005:G:
- Gene:
- LOC100130283 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
-=0./0
(
ALFA)
-=0.00129/36
(TOMMO)
- HGVS:
15.
rs1490363517 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A
[Show Flanks]
- Chromosome:
- 16:8850462
(GRCh38)
16:8944319
(GRCh37)
- Canonical SPDI:
- NC_000016.10:8850461:C:A
- Gene:
- LOC100130283 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.000071/1
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000014/2
(GnomAD)
- HGVS:
16.
rs1490351085 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GA>-
[Show Flanks]
- Chromosome:
- 16:8858355
(GRCh38)
16:8952212
(GRCh37)
- Canonical SPDI:
- NC_000016.10:8858351:AGAGA:AGA
- Gene:
- CARHSP1 (Varview), LOC100130283 (Varview)
- Functional Consequence:
- coding_sequence_variant,intron_variant,stop_gained
- Validated:
- by frequency,by alfa
- MAF:
AGA=0./0
(
ALFA)
-=0.000004/1
(TOPMED)
- HGVS:
NC_000016.10:g.8858353GA[1], NC_000016.9:g.8952210GA[1], NM_014316.4:c.278_279del, NM_014316.3:c.278_279del, XM_011522444.3:c.278_279del, XM_011522444.2:c.278_279del, XM_011522444.1:c.278_279del, NM_001042476.2:c.278_279del, NM_001278261.2:c.278_279del, NM_001278261.1:c.278_279del, NM_001278262.2:c.278_279del, NM_001278262.1:c.278_279del, NM_001278264.2:c.278_279del, NM_001278264.1:c.278_279del, NM_001278260.2:c.278_279del, NM_001278260.1:c.278_279del, NM_001278265.2:c.278_279del, NM_001278265.1:c.278_279del, NM_001278266.2:c.278_279del, NM_001278266.1:c.278_279del, XM_047433884.1:c.278_279del, XM_047433885.1:c.278_279del, XM_047433886.1:c.278_279del, NM_001278263.1:c.278_279del, NP_055131.2:p.Ile92_Ser93insTer, XP_011520746.1:p.Ile92_Ser93insTer, NP_001035941.1:p.Ile92_Ser93insTer, NP_001265190.1:p.Ile92_Ser93insTer, NP_001265191.1:p.Ile92_Ser93insTer, NP_001265193.1:p.Ile92_Ser93insTer, NP_001265189.1:p.Ile92_Ser93insTer, NP_001265194.1:p.Ile92_Ser93insTer, NP_001265195.1:p.Ile92_Ser93insTer, XP_047289840.1:p.Ile92_Ser93insTer, XP_047289841.1:p.Ile92_Ser93insTer, XP_047289842.1:p.Ile92_Ser93insTer, NP_001265192.1:p.Ile92_Ser93insTer
17.
rs1490320957 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 16:8856473
(GRCh38)
16:8950330
(GRCh37)
- Canonical SPDI:
- NC_000016.10:8856472:G:A
- Gene:
- CARHSP1 (Varview), LOC100130283 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.000264/4
(
ALFA)
A=0.000011/3
(TOPMED)
A=0.000029/4
(GnomAD)
A=0.000893/4
(Estonian)
- HGVS:
18.
rs1490308181 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 16:8848662
(GRCh38)
16:8942519
(GRCh37)
- Canonical SPDI:
- NC_000016.10:8848661:T:C
- Gene:
- PMM2 (Varview), LOC100130283 (Varview)
- Functional Consequence:
- 3_prime_UTR_variant,upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000011/3
(TOPMED)
- HGVS:
20.
rs1490302292 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 16:8855184
(GRCh38)
16:8949041
(GRCh37)
- Canonical SPDI:
- NC_000016.10:8855183:C:T
- Gene:
- CARHSP1 (Varview), LOC100130283 (Varview)
- Functional Consequence:
- coding_sequence_variant,non_coding_transcript_variant,missense_variant
- HGVS:
NC_000016.10:g.8855184C>T, NC_000016.9:g.8949041C>T, NM_014316.4:c.424G>A, NM_014316.3:c.424G>A, XM_011522444.3:c.424G>A, XM_011522444.2:c.424G>A, XM_011522444.1:c.424G>A, NM_001042476.2:c.424G>A, NM_001278261.2:c.424G>A, NM_001278261.1:c.424G>A, NM_001278262.2:c.424G>A, NM_001278262.1:c.424G>A, NM_001278264.2:c.424G>A, NM_001278264.1:c.424G>A, NM_001278260.2:c.424G>A, NM_001278260.1:c.424G>A, NM_001278265.2:c.424G>A, NM_001278265.1:c.424G>A, NM_001278266.2:c.424G>A, NM_001278266.1:c.424G>A, XM_047433884.1:c.424G>A, XM_047433885.1:c.424G>A, XM_047433886.1:c.424G>A, NM_001278263.1:c.424G>A, NR_147908.1:n.601C>T, NP_055131.2:p.Gly142Arg, XP_011520746.1:p.Gly142Arg, NP_001035941.1:p.Gly142Arg, NP_001265190.1:p.Gly142Arg, NP_001265191.1:p.Gly142Arg, NP_001265193.1:p.Gly142Arg, NP_001265189.1:p.Gly142Arg, NP_001265194.1:p.Gly142Arg, NP_001265195.1:p.Gly142Arg, XP_047289840.1:p.Gly142Arg, XP_047289841.1:p.Gly142Arg, XP_047289842.1:p.Gly142Arg, NP_001265192.1:p.Gly142Arg