SNP Links for Gene (Select 100271702) - SNP

Links from Gene

Items: 1 to 20 of 2741

<< First< Prev

Page of 138

Next >Last >>

Select item 14915743891.

rs1491574389 has merged into rs1254679042 [Homo sapiens]

Variant type:: DELINS
Alleles:: GG>-,G [Show Flanks]
Chromosome:: 12:1929991 (GRCh38)
12:2039157 (GRCh37)
Canonical SPDI:: NC_000012.12:1929987:GGGGG:GGG,NC_000012.12:1929987:GGGGG:GGGG
Gene:: LINC00940 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GGGG=0./0 (ALFA)
-=0.00008/4 (GnomAD)
HGVS:: NC_000012.12:g.1929991_1929992del, NC_000012.12:g.1929992del, NC_000012.11:g.2039157_2039158del, NC_000012.11:g.2039158del, NW_018654718.1:g.272135_272136del, NW_018654718.1:g.272136del, NR_036546.1:n.1565_1566del, NR_036546.1:n.1566del

Select item 14915368362.

rs1491536836 [Homo sapiens]

Variant type:: INS
Alleles:: ->T [Show Flanks]
Chromosome:: 12:1929988 (GRCh38)
12:2039155 (GRCh37)
Canonical SPDI:: NC_000012.12:1929988::T
Gene:: LINC00940 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: T=0.00795/118 (TOMMO)
T=0.01/6 (NorthernSweden)
T=0.01953/35 (Korea1K)
HGVS:: NC_000012.12:g.1929988_1929989insT, NC_000012.11:g.2039154_2039155insT, NW_018654718.1:g.272132_272133insT, NR_036546.1:n.1565_1566insA

Select item 14915075873.

rs1491507587 [Homo sapiens]

Variant type:: INS
Alleles:: ->CTGC [Show Flanks]
Chromosome:: 12:1933121 (GRCh38)
12:2042288 (GRCh37)
Canonical SPDI:: NC_000012.12:1933121::CTGC
Gene:: LINC00940 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: CTGC=0./0 (ALFA)
HGVS:: NC_000012.12:g.1933121_1933122insCTGC, NC_000012.11:g.2042287_2042288insCTGC, NW_018654718.1:g.275265_275266insCTGC

Select item 14914657864.

rs1491465786 [Homo sapiens]

Variant type:: DELINS
Alleles:: AT>- [Show Flanks]
Chromosome:: 12:1933088 (GRCh38)
12:2042254 (GRCh37)
Canonical SPDI:: NC_000012.12:1933086:TAT:T
Gene:: LINC00940 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.001139/16 (ALFA)
-=0.000829/14 (TOMMO)
-=0.00091/123 (GnomAD)
-=0.001235/327 (TOPMED)
-=0.001562/10 (1000Genomes)
-=0.001618/6 (TWINSUK)
-=0.002183/4 (Korea1K)
-=0.002335/9 (ALSPAC)
HGVS:: NC_000012.12:g.1933088_1933089del, NC_000012.11:g.2042254_2042255del, NW_018654718.1:g.275232_275233del

Select item 14911843125.

rs1491184312 has merged into rs368687017 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>- [Show Flanks]
Chromosome:: 12:1933013 (GRCh38)
12:2042179 (GRCh37)
Canonical SPDI:: NC_000012.12:1933011:TTT:T
Gene:: LINC00940 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.005142/61 (ALFA)
-=0.006958/969 (GnomAD)
-=0.007808/39 (1000Genomes)
HGVS:: NC_000012.12:g.1933013_1933014del, NC_000012.11:g.2042179_2042180del, NW_018654718.1:g.275157_275158del

Select item 14911239496.

rs1491123949 has merged into rs368829837 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->ATGTGT [Show Flanks]
Chromosome:: 12:1933078 (GRCh38)
12:2042245 (GRCh37)
Canonical SPDI:: NC_000012.12:1933078:TGTGT:TGTGTATGTGT
Gene:: LINC00940 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TGTGTATGTGT=0./0 (ALFA)
HGVS:: NC_000012.12:g.1933079_1933083TG[2]TATGTGT[1], NC_000012.11:g.2042245_2042249TG[2]TATGTGT[1], NW_018654718.1:g.275223_275227TG[2]TATGTGT[1]

Select item 14898463237.

rs1489846323 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 12:1933220 (GRCh38)
12:2042386 (GRCh37)
Canonical SPDI:: NC_000012.12:1933219:G:A
Gene:: LINC00940 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000012.12:g.1933220G>A, NC_000012.11:g.2042386G>A, NW_018654718.1:g.275364G>A

Select item 14898307748.

rs1489830774 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 12:1934115 (GRCh38)
12:2043281 (GRCh37)
Canonical SPDI:: NC_000012.12:1934114:A:C
Gene:: LINC00940 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000012.12:g.1934115A>C, NC_000012.11:g.2043281A>C, NW_018654718.1:g.276259A>C

Select item 14896878349.

rs1489687834 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 12:1937528 (GRCh38)
12:2046694 (GRCh37)
Canonical SPDI:: NC_000012.12:1937527:T:C
Gene:: LINC00940 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000012.12:g.1937528T>C, NC_000012.11:g.2046694T>C, NW_018654718.1:g.279672T>C

Select item 148949563710.

rs1489495637 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 12:1928844 (GRCh38)
12:2038010 (GRCh37)
Canonical SPDI:: NC_000012.12:1928843:G:A
Gene:: LINC00940 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.1928844G>A, NC_000012.11:g.2038010G>A, NW_018654718.1:g.270988G>A

Select item 148942379611.

rs1489423796 [Homo sapiens]

Variant type:: DELINS
Alleles:: GGAGGG>- [Show Flanks]
Chromosome:: 12:1930030 (GRCh38)
12:2039196 (GRCh37)
Canonical SPDI:: NC_000012.12:1930024:GAGGGGGAGGG:GAGGG
Gene:: LINC00940 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GAGGG=0./0 (ALFA)
-=0.00003/2 (GnomAD)
HGVS:: NC_000012.12:g.1930030_1930035del, NC_000012.11:g.2039196_2039201del, NW_018654718.1:g.272174_272179del, NR_036546.1:n.1524_1529del

Select item 148926419112.

rs1489264191 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 12:1934156 (GRCh38)
12:2043322 (GRCh37)
Canonical SPDI:: NC_000012.12:1934155:T:C
Gene:: LINC00940 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.1934156T>C, NC_000012.11:g.2043322T>C, NW_018654718.1:g.276300T>C

Select item 148925251313.

rs1489252513 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 12:1929859 (GRCh38)
12:2039025 (GRCh37)
Canonical SPDI:: NC_000012.12:1929858:G:A,NC_000012.12:1929858:G:C
Gene:: LINC00940 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000012.12:g.1929859G>A, NC_000012.12:g.1929859G>C, NC_000012.11:g.2039025G>A, NC_000012.11:g.2039025G>C, NW_018654718.1:g.272003G>A, NW_018654718.1:g.272003G>C, NR_036546.1:n.1695C>T, NR_036546.1:n.1695C>G

Select item 148899522814.

rs1488995228 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 12:1938077 (GRCh38)
12:2047243 (GRCh37)
Canonical SPDI:: NC_000012.12:1938076:C:A,NC_000012.12:1938076:C:G,NC_000012.12:1938076:C:T
Gene:: LINC00940 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
HGVS:: NC_000012.12:g.1938077C>A, NC_000012.12:g.1938077C>G, NC_000012.12:g.1938077C>T, NC_000012.11:g.2047243C>A, NC_000012.11:g.2047243C>G, NC_000012.11:g.2047243C>T, NW_018654718.1:g.280221C>A, NW_018654718.1:g.280221C>G, NW_018654718.1:g.280221C>T

Select item 148881619215.

rs1488816192 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 12:1937642 (GRCh38)
12:2046809 (GRCh37)
Canonical SPDI:: NC_000012.12:1937642:AA:AAA
Gene:: LINC00940 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: AAA=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000012.12:g.1937644dup, NC_000012.11:g.2046810dup, NW_018654718.1:g.279788dup

Select item 148855508516.

rs1488555085 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 12:1932241 (GRCh38)
12:2041407 (GRCh37)
Canonical SPDI:: NC_000012.12:1932240:C:G,NC_000012.12:1932240:C:T
Gene:: LINC00940 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000012.12:g.1932241C>G, NC_000012.12:g.1932241C>T, NC_000012.11:g.2041407C>G, NC_000012.11:g.2041407C>T, NW_018654718.1:g.274385C>G, NW_018654718.1:g.274385C>T

Select item 148853880617.

rs1488538806 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 12:1936919 (GRCh38)
12:2046085 (GRCh37)
Canonical SPDI:: NC_000012.12:1936918:T:G
Gene:: LINC00940 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.1936919T>G, NC_000012.11:g.2046085T>G, NW_018654718.1:g.279063T>G

Select item 148823156118.

rs1488231561 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 12:1932560 (GRCh38)
12:2041726 (GRCh37)
Canonical SPDI:: NC_000012.12:1932559:C:A,NC_000012.12:1932559:C:T
Gene:: LINC00940 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000012.12:g.1932560C>A, NC_000012.12:g.1932560C>T, NC_000012.11:g.2041726C>A, NC_000012.11:g.2041726C>T, NW_018654718.1:g.274704C>A, NW_018654718.1:g.274704C>T

Select item 148756494819.

rs1487564948 [Homo sapiens]

Variant type:: DEL
Alleles:: A>- [Show Flanks]
Chromosome:: 12:1930007 (GRCh38)
12:2039173 (GRCh37)
Canonical SPDI:: NC_000012.12:1930006:A:
Gene:: LINC00940 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000012.12:g.1930007del, NC_000012.11:g.2039173del, NW_018654718.1:g.272151del, NR_036546.1:n.1547del

Select item 148726578620.

rs1487265786 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 12:1937114 (GRCh38)
12:2046280 (GRCh37)
Canonical SPDI:: NC_000012.12:1937113:C:T
Gene:: LINC00940 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000012.12:g.1937114C>T, NC_000012.11:g.2046280C>T, NW_018654718.1:g.279258C>T

<< First< Prev

Page of 138

Next >Last >>

dbSNP

Result Filters

Validation Status

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Gene

Items: 1 to 20 of 2741

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity