SNP Links for Gene (Select 100288152) - SNP

Warning: The NCBI web site requires JavaScript to function. more...

Links from Gene

Items: 1 to 20 of 1000

<< First< Prev

Page of 50

Next >Last >>

Select item 14901683931.

rs1490168393 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 5:474115 (GRCh38)
5:474230 (GRCh37)
Canonical SPDI:: NC_000005.10:474114:C:T
Gene:: SLC9A3 (Varview), PP7080 (Varview), SLC9A3-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000005.10:g.474115C>T, NC_000005.9:g.474230C>T, NG_046804.1:g.101314G>A

Select item 14900049972.

rs1490004997 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 5:473812 (GRCh38)
5:473927 (GRCh37)
Canonical SPDI:: NC_000005.10:473811:G:A
Gene:: SLC9A3 (Varview), PP7080 (Varview), SLC9A3-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000005.10:g.473812G>A, NC_000005.9:g.473927G>A, NG_046804.1:g.101617C>T

Select item 14896997213.

rs1489699721 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 5:479367 (GRCh38)
5:479482 (GRCh37)
Canonical SPDI:: NC_000005.10:479366:G:A,NC_000005.10:479366:G:T
Gene:: SLC9A3 (Varview), SLC9A3-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000014/2 (GnomAD)
HGVS:: NC_000005.10:g.479367G>A, NC_000005.10:g.479367G>T, NC_000005.9:g.479482G>A, NC_000005.9:g.479482G>T, NG_046804.1:g.96062C>T, NG_046804.1:g.96062C>A

Select item 14896006904.

rs1489600690 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 5:472142 (GRCh38)
5:472257 (GRCh37)
Canonical SPDI:: NC_000005.10:472141:A:C
Gene:: SLC9A3 (Varview), PP7080 (Varview), SLC9A3-AS1 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000005.10:g.472142A>C, NC_000005.9:g.472257A>C, NG_046804.1:g.103287T>G, NM_004174.4:c.*1237T>G, NM_004174.3:c.*1237T>G, NM_001284351.3:c.*1237T>G, NM_001284351.2:c.*1237T>G

Select item 14895308155.

rs1489530815 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 5:475840 (GRCh38)
5:475955 (GRCh37)
Canonical SPDI:: NC_000005.10:475839:C:T
Gene:: SLC9A3 (Varview), SLC9A3-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000015/4 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000005.10:g.475840C>T, NC_000005.9:g.475955C>T, NG_046804.1:g.99589G>A

Select item 14894697126.

rs1489469712 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 5:476310 (GRCh38)
5:476425 (GRCh37)
Canonical SPDI:: NC_000005.10:476309:G:A
Gene:: SLC9A3 (Varview), SLC9A3-AS1 (Varview)
Functional Consequence:: synonymous_variant,non_coding_transcript_variant,coding_sequence_variant
HGVS:: NC_000005.10:g.476310G>A, NC_000005.9:g.476425G>A, NG_046804.1:g.99119C>T, NM_004174.4:c.1959C>T, NM_004174.3:c.1959C>T, NM_004174.2:c.1959C>T, NM_001284351.3:c.1932C>T, NM_001284351.2:c.1932C>T, NM_001284351.1:c.1932C>T, NR_125375.1:n.426G>A

Select item 14890775487.

rs1489077548 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 5:474096 (GRCh38)
5:474211 (GRCh37)
Canonical SPDI:: NC_000005.10:474095:G:A,NC_000005.10:474095:G:C
Gene:: SLC9A3 (Varview), PP7080 (Varview), SLC9A3-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000014/2 (GnomAD)
C=0.000035/1 (TOMMO)
HGVS:: NC_000005.10:g.474096G>A, NC_000005.10:g.474096G>C, NC_000005.9:g.474211G>A, NC_000005.9:g.474211G>C, NG_046804.1:g.101333C>T, NG_046804.1:g.101333C>G

Select item 14890473288.

rs1489047328 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 5:475930 (GRCh38)
5:476045 (GRCh37)
Canonical SPDI:: NC_000005.10:475929:T:C
Gene:: SLC9A3 (Varview), SLC9A3-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: C=0.000007/1 (GnomAD)
HGVS:: NC_000005.10:g.475930T>C, NC_000005.9:g.476045T>C, NG_046804.1:g.99499A>G

Select item 14888175109.

rs1488817510 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 5:478915 (GRCh38)
5:479030 (GRCh37)
Canonical SPDI:: NC_000005.10:478914:C:A
Gene:: SLC9A3 (Varview), SLC9A3-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000005.10:g.478915C>A, NC_000005.9:g.479030C>A, NG_046804.1:g.96514G>T

Select item 148867652310.

rs1488676523 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 5:471470 (GRCh38)
5:471585 (GRCh37)
Canonical SPDI:: NC_000005.10:471469:A:G
Gene:: SLC9A3 (Varview), PP7080 (Varview), SLC9A3-AS1 (Varview)
Functional Consequence:: 3_prime_UTR_variant,non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000005.10:g.471470A>G, NC_000005.9:g.471585A>G, NG_046804.1:g.103959T>C, NM_004174.4:c.*1909T>C, NM_001284351.3:c.*1909T>C, NM_015389.1:c.*438T>C, NR_024158.1:n.783T>C

Select item 148839087111.

rs1488390871 [Homo sapiens]

Variant type:: DELINS
Alleles:: ACCA>- [Show Flanks]
Chromosome:: 5:474203 (GRCh38)
5:474318 (GRCh37)
Canonical SPDI:: NC_000005.10:474201:AACCA:A
Gene:: SLC9A3 (Varview), PP7080 (Varview), SLC9A3-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by cluster
MAF:: -=0.00004/1 (TOMMO)
HGVS:: NC_000005.10:g.474203_474206del, NC_000005.9:g.474318_474321del, NG_046804.1:g.101224_101227del

Select item 148794949812.

rs1487949498 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 5:476121 (GRCh38)
5:476236 (GRCh37)
Canonical SPDI:: NC_000005.10:476120:C:T
Gene:: SLC9A3 (Varview), SLC9A3-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000224/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000223/1 (Estonian)
HGVS:: NC_000005.10:g.476121C>T, NC_000005.9:g.476236C>T, NG_046804.1:g.99308G>A

Select item 148786601213.

rs1487866012 [Homo sapiens]

Variant type:: DELINS
Alleles:: TGG>- [Show Flanks]
Chromosome:: 5:480326 (GRCh38)
5:480441 (GRCh37)
Canonical SPDI:: NC_000005.10:480324:GTGG:G
Gene:: SLC9A3 (Varview), SLC9A3-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000011/3 (TOPMED)
HGVS:: NC_000005.10:g.480326_480328del, NC_000005.9:g.480441_480443del, NG_046804.1:g.95102_95104del

Select item 148756984714.

rs1487569847 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTAGGGTCACCGGG>- [Show Flanks]
Chromosome:: 5:475229 (GRCh38)
5:475344 (GRCh37)
Canonical SPDI:: NC_000005.10:475227:GTTAGGGTCACCGGG:G
Gene:: SLC9A3 (Varview), SLC9A3-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000005.10:g.475229_475242del, NC_000005.9:g.475344_475357del, NG_046804.1:g.100188_100201del, NR_125375.1:n.257_270del

Select item 148727578115.

rs1487275781 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 5:474733 (GRCh38)
5:474848 (GRCh37)
Canonical SPDI:: NC_000005.10:474732:G:A
Gene:: SLC9A3 (Varview), PP7080 (Varview), SLC9A3-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0.00008/1 (ALFA)
HGVS:: NC_000005.10:g.474733G>A, NC_000005.9:g.474848G>A, NG_046804.1:g.100696C>T

Select item 148690596416.

rs1486905964 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 5:473012 (GRCh38)
5:473127 (GRCh37)
Canonical SPDI:: NC_000005.10:473011:C:A,NC_000005.10:473011:C:T
Gene:: SLC9A3 (Varview), PP7080 (Varview), SLC9A3-AS1 (Varview)
Functional Consequence:: 3_prime_UTR_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000005.10:g.473012C>A, NC_000005.10:g.473012C>T, NC_000005.9:g.473127C>A, NC_000005.9:g.473127C>T, NG_046804.1:g.102417G>T, NG_046804.1:g.102417G>A, NM_004174.4:c.*367G>T, NM_004174.4:c.*367G>A, NM_004174.3:c.*367G>T, NM_004174.3:c.*367G>A, NM_001284351.3:c.*367G>T, NM_001284351.3:c.*367G>A, NM_001284351.2:c.*367G>T, NM_001284351.2:c.*367G>A, NM_015389.1:c.-77G>T, NM_015389.1:c.-77G>A

Select item 148670009817.

rs1486700098 [Homo sapiens]

Variant type:: DEL
Alleles:: A>- [Show Flanks]
Chromosome:: 5:474663 (GRCh38)
5:474778 (GRCh37)
Canonical SPDI:: NC_000005.10:474662:A:
Gene:: SLC9A3 (Varview), PP7080 (Varview), SLC9A3-AS1 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000005.10:g.474663del, NC_000005.9:g.474778del, NG_046804.1:g.100766del

Select item 148652543618.

rs1486525436 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 5:479125 (GRCh38)
5:479240 (GRCh37)
Canonical SPDI:: NC_000005.10:479124:C:T
Gene:: SLC9A3 (Varview), SLC9A3-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000038/10 (TOPMED)
HGVS:: NC_000005.10:g.479125C>T, NC_000005.9:g.479240C>T, NG_046804.1:g.96304G>A

Select item 148622319919.

rs1486223199 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 5:472406 (GRCh38)
5:472521 (GRCh37)
Canonical SPDI:: NC_000005.10:472405:C:G
Gene:: SLC9A3 (Varview), PP7080 (Varview), SLC9A3-AS1 (Varview)
Functional Consequence:: 3_prime_UTR_variant,intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000005.10:g.472406C>G, NC_000005.9:g.472521C>G, NG_046804.1:g.103023G>C, NM_004174.4:c.*973G>C, NM_004174.3:c.*973G>C, NM_001284351.3:c.*973G>C, NM_001284351.2:c.*973G>C

Select item 148555110820.

rs1485551108 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 5:479604 (GRCh38)
5:479719 (GRCh37)
Canonical SPDI:: NC_000005.10:479603:C:G,NC_000005.10:479603:C:T
Gene:: SLC9A3 (Varview), SLC9A3-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00034/1 (KOREAN)
T=0.01402/3 (Vietnamese)
HGVS:: NC_000005.10:g.479604C>G, NC_000005.10:g.479604C>T, NC_000005.9:g.479719C>G, NC_000005.9:g.479719C>T, NG_046804.1:g.95825G>C, NG_046804.1:g.95825G>A

<< First< Prev

Page of 50

Next >Last >>

Supplemental Content

Filters: Manage Filters

Find related data

Recent activity

Clear Turn Off Turn On

SNP Links for Gene (Select 100288152) (1000)
SNP

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

dbSNP

Result Filters

Clinical Significance

Validation Status

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to: