SNP Links for Gene (Select 100302129) - SNP

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Select item 14898371291.

rs1489837129 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:21497903 (GRCh38)
10:21786832 (GRCh37)
Canonical SPDI:: NC_000010.11:21497902:C:T
Gene:: MIR1915HG (Varview), MIR1915 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000010.11:g.21497903C>T, NC_000010.10:g.21786832C>T

Select item 14886332432.

rs1488633243 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 10:21497081 (GRCh38)
10:21786010 (GRCh37)
Canonical SPDI:: NC_000010.11:21497080:C:A
Gene:: MIR1915HG (Varview), MIR1915 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000034/9 (TOPMED)
HGVS:: NC_000010.11:g.21497081C>A, NC_000010.10:g.21786010C>A, NM_001010911.3:c.-267G>T, NM_001010911.2:c.-267G>T, NR_160800.1:n.180G>T

Select item 14886056283.

rs1488605628 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:21496740 (GRCh38)
10:21785669 (GRCh37)
Canonical SPDI:: NC_000010.11:21496739:C:T
Gene:: MIR1915HG (Varview), MIR1915 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000010.11:g.21496740C>T, NC_000010.10:g.21785669C>T

Select item 14879611754.

rs1487961175 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:21497521 (GRCh38)
10:21786450 (GRCh37)
Canonical SPDI:: NC_000010.11:21497520:C:T
Gene:: MIR1915HG (Varview), MIR1915 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000010.11:g.21497521C>T, NC_000010.10:g.21786450C>T

Select item 14854150875.

rs1485415087 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 10:21496461 (GRCh38)
10:21785390 (GRCh37)
Canonical SPDI:: NC_000010.11:21496460:A:C
Gene:: MIR1915HG (Varview), MIR1915 (Varview)
Functional Consequence:: downstream_transcript_variant,intron_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000011/3 (TOPMED)
HGVS:: NC_000010.11:g.21496461A>C, NC_000010.10:g.21785390A>C

Select item 14850900356.

rs1485090035 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 10:21497251 (GRCh38)
10:21786180 (GRCh37)
Canonical SPDI:: NC_000010.11:21497250:G:T
Gene:: MIR1915HG (Varview), MIR1915 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000015/4 (TOPMED)
T=0.000022/3 (GnomAD)
HGVS:: NC_000010.11:g.21497251G>T, NC_000010.10:g.21786180G>T, NM_001010911.3:c.-437C>A, NM_001010911.2:c.-437C>A, NR_160800.1:n.10C>A

Select item 14847194887.

rs1484719488 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 10:21498353 (GRCh38)
10:21787282 (GRCh37)
Canonical SPDI:: NC_000010.11:21498352:C:T
Gene:: MIR1915HG (Varview), MIR1915 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000010.11:g.21498353C>T, NC_000010.10:g.21787282C>T

Select item 14844302468.

rs1484430246 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 10:21496064 (GRCh38)
10:21784993 (GRCh37)
Canonical SPDI:: NC_000010.11:21496063:A:G
Gene:: MIR1915HG (Varview), MIR1915 (Varview)
Functional Consequence:: downstream_transcript_variant,intron_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.21496064A>G, NC_000010.10:g.21784993A>G

Select item 14826686299.

rs1482668629 has merged into rs1306090694 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>-,CC [Show Flanks]
Chromosome:: 10:21497164 (GRCh38)
10:21786093 (GRCh37)
Canonical SPDI:: NC_000010.11:21497163:CCCCCC:CCCCC,NC_000010.11:21497163:CCCCCC:CCCCCCC
Gene:: MIR1915HG (Varview), MIR1915 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CCCCCCC=0./0 (ALFA)
-=0.00016/1 (1000Genomes)
HGVS:: NC_000010.11:g.21497169del, NC_000010.11:g.21497169dup, NC_000010.10:g.21786098del, NC_000010.10:g.21786098dup, NM_001010911.3:c.-350del, NM_001010911.3:c.-350dup, NM_001010911.2:c.-350del, NM_001010911.2:c.-350dup, NR_160800.1:n.97del, NR_160800.1:n.97dup

Select item 148256914010.

rs1482569140 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 10:21496872 (GRCh38)
10:21785801 (GRCh37)
Canonical SPDI:: NC_000010.11:21496871:C:G,NC_000010.11:21496871:C:T
Gene:: MIR1915HG (Varview), MIR1915 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.21496872C>G, NC_000010.11:g.21496872C>T, NC_000010.10:g.21785801C>G, NC_000010.10:g.21785801C>T, NM_001010911.3:c.-58G>C, NM_001010911.3:c.-58G>A, NM_001010911.2:c.-58G>C, NM_001010911.2:c.-58G>A, NR_160800.1:n.389G>C, NR_160800.1:n.389G>A

Select item 148142354511.

rs1481423545 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 10:21498029 (GRCh38)
10:21786958 (GRCh37)
Canonical SPDI:: NC_000010.11:21498028:A:C,NC_000010.11:21498028:A:G
Gene:: MIR1915HG (Varview), MIR1915 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
HGVS:: NC_000010.11:g.21498029A>C, NC_000010.11:g.21498029A>G, NC_000010.10:g.21786958A>C, NC_000010.10:g.21786958A>G

Select item 147923551112.

rs1479235511 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 10:21496337 (GRCh38)
10:21785266 (GRCh37)
Canonical SPDI:: NC_000010.11:21496336:C:G
Gene:: MIR1915HG (Varview), MIR1915 (Varview)
Functional Consequence:: downstream_transcript_variant,intron_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.21496337C>G, NC_000010.10:g.21785266C>G

Select item 147912456913.

rs1479124569 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 10:21497205 (GRCh38)
10:21786134 (GRCh37)
Canonical SPDI:: NC_000010.11:21497204:A:G
Gene:: MIR1915HG (Varview), MIR1915 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000015/4 (TOPMED)
G=0.000026/3 (GnomAD)
HGVS:: NC_000010.11:g.21497205A>G, NC_000010.10:g.21786134A>G, NM_001010911.3:c.-391T>C, NM_001010911.2:c.-391T>C, NR_160800.1:n.56T>C

Select item 147901009914.

rs1479010099 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 10:21496661 (GRCh38)
10:21785590 (GRCh37)
Canonical SPDI:: NC_000010.11:21496660:C:G,NC_000010.11:21496660:C:T
Gene:: MIR1915HG (Varview), MIR1915 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000007/1 (GnomAD_exomes)
T=0.000011/3 (TOPMED)
G=0.000312/2 (1000Genomes)
C=0.5/1 (SGDP_PRJ)
HGVS:: NC_000010.11:g.21496661C>G, NC_000010.11:g.21496661C>T, NC_000010.10:g.21785590C>G, NC_000010.10:g.21785590C>T

Select item 147830980115.

rs1478309801 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 10:21496560 (GRCh38)
10:21785489 (GRCh37)
Canonical SPDI:: NC_000010.11:21496559:G:A
Gene:: MIR1915HG (Varview), MIR1915 (Varview)
Functional Consequence:: downstream_transcript_variant,intron_variant,500B_downstream_variant
Validated:: by frequency,by cluster
MAF:: A=0.00005/1 (GnomAD_exomes)
A=0.00006/1 (TOMMO)
HGVS:: NC_000010.11:g.21496560G>A, NC_000010.10:g.21785489G>A

Select item 147737120916.

rs1477371209 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 10:21498529 (GRCh38)
10:21787458 (GRCh37)
Canonical SPDI:: NC_000010.11:21498528:A:G
Gene:: MIR1915HG (Varview), MIR1915 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
G=0.000035/1 (TOMMO)
HGVS:: NC_000010.11:g.21498529A>G, NC_000010.10:g.21787458A>G

Select item 147519505017.

rs1475195050 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 10:21497275 (GRCh38)
10:21786204 (GRCh37)
Canonical SPDI:: NC_000010.11:21497274:T:A
Gene:: MIR1915HG (Varview), MIR1915 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000010.11:g.21497275T>A, NC_000010.10:g.21786204T>A, NM_001010911.2:c.-461A>T

Select item 147502115118.

rs1475021151 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 10:21496529 (GRCh38)
10:21785458 (GRCh37)
Canonical SPDI:: NC_000010.11:21496528:G:A
Gene:: MIR1915HG (Varview), MIR1915 (Varview)
Functional Consequence:: downstream_transcript_variant,intron_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000010.11:g.21496529G>A, NC_000010.10:g.21785458G>A

Select item 147500405619.

rs1475004056 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 10:21498211 (GRCh38)
10:21787140 (GRCh37)
Canonical SPDI:: NC_000010.11:21498210:G:A
Gene:: MIR1915HG (Varview), MIR1915 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.21498211G>A, NC_000010.10:g.21787140G>A

Select item 147481926220.

rs1474819262 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 10:21496242 (GRCh38)
10:21785171 (GRCh37)
Canonical SPDI:: NC_000010.11:21496241:C:G,NC_000010.11:21496241:C:T
Gene:: MIR1915HG (Varview), MIR1915 (Varview)
Functional Consequence:: downstream_transcript_variant,intron_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000010.11:g.21496242C>G, NC_000010.11:g.21496242C>T, NC_000010.10:g.21785171C>G, NC_000010.10:g.21785171C>T

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