SNP Links for Gene (Select 100302167) - SNP

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Select item 14906668921.

rs1490666892 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 9:40930100 (GRCh38)
9:69003329 (GRCh37)
Canonical SPDI:: NC_000009.12:40930099:C:A,NC_000009.12:40930099:C:T
Gene:: MIR1299 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000022/3 (GnomAD)
A=0.000071/1 (TOMMO)
T=0.061259/179 (KOREAN)
HGVS:: NC_000009.12:g.40930100C>A, NC_000009.12:g.40930100C>T, NC_000009.11:g.69003329C>A, NC_000009.11:g.69003329C>T

Select item 14902140062.

rs1490214006 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 9:40929827 (GRCh38)
9:69003056 (GRCh37)
Canonical SPDI:: NC_000009.12:40929826:C:G
Gene:: MIR1299 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000009.12:g.40929827C>G, NC_000009.11:g.69003056C>G

Select item 14901779243.

rs1490177924 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 9:40930296 (GRCh38)
9:69003525 (GRCh37)
Canonical SPDI:: NC_000009.12:40930295:T:G
Gene:: MIR1299 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.40930296T>G, NC_000009.11:g.69003525T>G

Select item 14900675044.

rs1490067504 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 9:40931071 (GRCh38)
9:69004300 (GRCh37)
Canonical SPDI:: NC_000009.12:40931070:C:G,NC_000009.12:40931070:C:T
Gene:: MIR1299 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.40931071C>G, NC_000009.12:g.40931071C>T, NC_000009.11:g.69004300C>G, NC_000009.11:g.69004300C>T

Select item 14896950385.

rs1489695038 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:40929507 (GRCh38)
9:69002736 (GRCh37)
Canonical SPDI:: NC_000009.12:40929506:T:C
Gene:: MIR1299 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.07351/872 (ALFA)
C=0.06352/1065 (TOMMO)
C=0.08385/245 (KOREAN)
C=0.14288/915 (1000Genomes)
T=0.5/67 (SGDP_PRJ)
HGVS:: NC_000009.12:g.40929507T>C, NC_000009.11:g.69002736T>C

Select item 14876491366.

rs1487649136 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:40930608 (GRCh38)
9:69003837 (GRCh37)
Canonical SPDI:: NC_000009.12:40930607:A:G
Gene:: MIR1299 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000029/4 (GnomAD)
HGVS:: NC_000009.12:g.40930608A>G, NC_000009.11:g.69003837A>G

Select item 14873191387.

rs1487319138 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 9:40930907 (GRCh38)
9:69004136 (GRCh37)
Canonical SPDI:: NC_000009.12:40930906:GG:G
Gene:: MIR1299 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GG=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.40930908del, NC_000009.11:g.69004137del

Select item 14871601338.

rs1487160133 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:40930501 (GRCh38)
9:69003730 (GRCh37)
Canonical SPDI:: NC_000009.12:40930500:G:A
Gene:: MIR1299 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0.000084/1 (ALFA)
A=0.000029/4 (GnomAD)
HGVS:: NC_000009.12:g.40930501G>A, NC_000009.11:g.69003730G>A

Select item 14866705719.

rs1486670571 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:40930165 (GRCh38)
9:69003394 (GRCh37)
Canonical SPDI:: NC_000009.12:40930164:G:A
Gene:: MIR1299 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.40930165G>A, NC_000009.11:g.69003394G>A

Select item 148409702610.

rs1484097026 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 9:40928798 (GRCh38)
9:69002027 (GRCh37)
Canonical SPDI:: NC_000009.12:40928797:T:A
Gene:: MIR1299 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0.33687/3996 (ALFA)
A=0.03149/92 (KOREAN)
HGVS:: NC_000009.12:g.40928798T>A, NC_000009.11:g.69002027T>A

Select item 148232167011.

rs1482321670 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:40930996 (GRCh38)
9:69004225 (GRCh37)
Canonical SPDI:: NC_000009.12:40930995:T:C
Gene:: MIR1299 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000009.12:g.40930996T>C, NC_000009.11:g.69004225T>C

Select item 148201037912.

rs1482010379 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 9:40930692 (GRCh38)
9:69003921 (GRCh37)
Canonical SPDI:: NC_000009.12:40930691:G:A
Gene:: MIR1299 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0./0 (GnomAD)
HGVS:: NC_000009.12:g.40930692G>A, NC_000009.11:g.69003921G>A

Select item 148122491413.

rs1481224914 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 9:40929320 (GRCh38)
9:69002549 (GRCh37)
Canonical SPDI:: NC_000009.12:40929319:C:A
Gene:: MIR1299 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by cluster
MAF:: A=0.2249/659 (KOREAN)
HGVS:: NC_000009.12:g.40929320C>A, NC_000009.11:g.69002549C>A

Select item 148114681014.

rs1481146810 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 9:40930148 (GRCh38)
9:69003377 (GRCh37)
Canonical SPDI:: NC_000009.12:40930147:T:C
Gene:: MIR1299 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000009.12:g.40930148T>C, NC_000009.11:g.69003377T>C

Select item 148109195215.

rs1481091952 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 9:40929693 (GRCh38)
9:69002922 (GRCh37)
Canonical SPDI:: NC_000009.12:40929692:C:T
Gene:: MIR1299 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000009.12:g.40929693C>T, NC_000009.11:g.69002922C>T

Select item 148100942316.

rs1481009423 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 9:40930316 (GRCh38)
9:69003545 (GRCh37)
Canonical SPDI:: NC_000009.12:40930315:A:G
Gene:: MIR1299 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0.000061/1 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000009.12:g.40930316A>G, NC_000009.11:g.69003545A>G

Select item 147943266917.

rs1479432669 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 9:40930714 (GRCh38)
9:69003943 (GRCh37)
Canonical SPDI:: NC_000009.12:40930713:A:G,NC_000009.12:40930713:A:T
Gene:: MIR1299 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000009/1 (GnomAD)
T=0.005476/16 (KOREAN)
HGVS:: NC_000009.12:g.40930714A>G, NC_000009.12:g.40930714A>T, NC_000009.11:g.69003943A>G, NC_000009.11:g.69003943A>T

Select item 147917559618.

rs1479175596 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 9:40930518 (GRCh38)
9:69003747 (GRCh37)
Canonical SPDI:: NC_000009.12:40930517:G:C,NC_000009.12:40930517:G:T
Gene:: MIR1299 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000009.12:g.40930518G>C, NC_000009.12:g.40930518G>T, NC_000009.11:g.69003747G>C, NC_000009.11:g.69003747G>T

Select item 147820956019.

rs1478209560 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C,T [Show Flanks]
Chromosome:: 9:40929832 (GRCh38)
9:69003061 (GRCh37)
Canonical SPDI:: NC_000009.12:40929831:G:A,NC_000009.12:40929831:G:C,NC_000009.12:40929831:G:T
Gene:: MIR1299 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.00441/72 (ALFA)
T=0.02088/61 (KOREAN)
T=0.06855/439 (1000Genomes)
G=0.5/17 (SGDP_PRJ)
HGVS:: NC_000009.12:g.40929832G>A, NC_000009.12:g.40929832G>C, NC_000009.12:g.40929832G>T, NC_000009.11:g.69003061G>A, NC_000009.11:g.69003061G>C, NC_000009.11:g.69003061G>T

Select item 147479327920.

rs1474793279 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 9:40930469 (GRCh38)
9:69003698 (GRCh37)
Canonical SPDI:: NC_000009.12:40930468:C:A,NC_000009.12:40930468:C:T
Gene:: MIR1299 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
A=0.000014/2 (GnomAD)
HGVS:: NC_000009.12:g.40930469C>A, NC_000009.12:g.40930469C>T, NC_000009.11:g.69003698C>A, NC_000009.11:g.69003698C>T

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