SNP Links for Gene (Select 100302214) - SNP

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Links from Gene

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Select item 14910556261.

rs1491055626 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: X:118386022 (GRCh38)
X:117519986 (GRCh37)
Canonical SPDI:: NC_000023.11:118386022:T:TT
Gene:: WDR44 (Varview), MIR1277 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: TT=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000023.11:g.118386023dup, NC_000023.10:g.117519986dup, NG_021368.2:g.44951dup

Select item 14891570122.

rs1489157012 [Homo sapiens]

Variant type:: DELINS
Alleles:: C>- [Show Flanks]
Chromosome:: X:118386159 (GRCh38)
X:117520122 (GRCh37)
Canonical SPDI:: NC_000023.11:118386158:CC:C
Gene:: WDR44 (Varview), MIR1277 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CC=0./0 (ALFA)
-=0.000039/4 (GnomAD)
-=0.000042/11 (TOPMED)
HGVS:: NC_000023.11:g.118386160del, NC_000023.10:g.117520123del, NG_021368.2:g.45088del

Select item 14866677533.

rs1486667753 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: X:118385160 (GRCh38)
X:117519123 (GRCh37)
Canonical SPDI:: NC_000023.11:118385159:C:A,NC_000023.11:118385159:C:T
Gene:: WDR44 (Varview), MIR1277 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000019/2 (GnomAD)
HGVS:: NC_000023.11:g.118385160C>A, NC_000023.11:g.118385160C>T, NC_000023.10:g.117519123C>A, NC_000023.10:g.117519123C>T, NG_021368.2:g.44088C>A, NG_021368.2:g.44088C>T

Select item 14858021044.

rs1485802104 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:118386723 (GRCh38)
X:117520686 (GRCh37)
Canonical SPDI:: NC_000023.11:118386722:G:A
Gene:: WDR44 (Varview), MIR1277 (Varview)
Functional Consequence:: intron_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000281/3 (ALFA)
A=0.00001/1 (GnomAD)
A=0.000011/3 (TOPMED)
HGVS:: NC_000023.11:g.118386723G>A, NC_000023.10:g.117520686G>A, NG_021368.2:g.45651G>A

Select item 14837105895.

rs1483710589 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:118385730 (GRCh38)
X:117519693 (GRCh37)
Canonical SPDI:: NC_000023.11:118385729:G:A
Gene:: WDR44 (Varview), MIR1277 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000342/1 (KOREAN)
HGVS:: NC_000023.11:g.118385730G>A, NC_000023.10:g.117519693G>A, NG_021368.2:g.44658G>A

Select item 14829424716.

rs1482942471 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: X:118386520 (GRCh38)
X:117520483 (GRCh37)
Canonical SPDI:: NC_000023.11:118386519:T:G
Gene:: WDR44 (Varview), MIR1277 (Varview)
Functional Consequence:: intron_variant,500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency
MAF:: G=0.000008/1 (GnomAD_exomes)
HGVS:: NC_000023.11:g.118386520T>G, NC_000023.10:g.117520483T>G, NG_021368.2:g.45448T>G

Select item 14788290777.

rs1478829077 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: X:118385708 (GRCh38)
X:117519671 (GRCh37)
Canonical SPDI:: NC_000023.11:118385707:T:G
Gene:: WDR44 (Varview), MIR1277 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000023.11:g.118385708T>G, NC_000023.10:g.117519671T>G, NG_021368.2:g.44636T>G

Select item 14784495898.

rs1478449589 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:118384806 (GRCh38)
X:117518769 (GRCh37)
Canonical SPDI:: NC_000023.11:118384805:A:G
Gene:: WDR44 (Varview), MIR1277 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.118384806A>G, NC_000023.10:g.117518769A>G, NG_021368.2:g.43734A>G

Select item 14778445699.

rs1477844569 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: X:118386435 (GRCh38)
X:117520398 (GRCh37)
Canonical SPDI:: NC_000023.11:118386434:A:T
Gene:: WDR44 (Varview), MIR1277 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.118386435A>T, NC_000023.10:g.117520398A>T, NG_021368.2:g.45363A>T, NR_031685.1:n.42A>T

Select item 147746654710.

rs1477466547 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: X:118385600 (GRCh38)
X:117519563 (GRCh37)
Canonical SPDI:: NC_000023.11:118385599:C:G
Gene:: WDR44 (Varview), MIR1277 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000023.11:g.118385600C>G, NC_000023.10:g.117519563C>G, NG_021368.2:g.44528C>G

Select item 147379330311.

rs1473793303 has merged into rs370670319 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAA>-,AAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA [Show Flanks]
Chromosome:: X:118385663 (GRCh38)
X:117519626 (GRCh37)
Canonical SPDI:: NC_000023.11:118385657:AAAAAAAAAAA:AAAAA,NC_000023.11:118385657:AAAAAAAAAAA:AAAAAAAAAA,NC_000023.11:118385657:AAAAAAAAAAA:AAAAAAAAAAAA,NC_000023.11:118385657:AAAAAAAAAAA:AAAAAAAAAAAAA,NC_000023.11:118385657:AAAAAAAAAAA:AAAAAAAAAAAAAA
Gene:: WDR44 (Varview), MIR1277 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000023.11:g.118385663_118385668del, NC_000023.11:g.118385668del, NC_000023.11:g.118385668dup, NC_000023.11:g.118385667_118385668dup, NC_000023.11:g.118385666_118385668dup, NC_000023.10:g.117519626_117519631del, NC_000023.10:g.117519631del, NC_000023.10:g.117519631dup, NC_000023.10:g.117519630_117519631dup, NC_000023.10:g.117519629_117519631dup, NG_021368.2:g.44591_44596del, NG_021368.2:g.44596del, NG_021368.2:g.44596dup, NG_021368.2:g.44595_44596dup, NG_021368.2:g.44594_44596dup

Select item 147200820012.

rs1472008200 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: X:118386238 (GRCh38)
X:117520201 (GRCh37)
Canonical SPDI:: NC_000023.11:118386237:T:A,NC_000023.11:118386237:T:C
Gene:: WDR44 (Varview), MIR1277 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000026/7 (TOPMED)
C=0.000049/5 (GnomAD)
A=0.000265/1 (1000Genomes)
HGVS:: NC_000023.11:g.118386238T>A, NC_000023.11:g.118386238T>C, NC_000023.10:g.117520201T>A, NC_000023.10:g.117520201T>C, NG_021368.2:g.45166T>A, NG_021368.2:g.45166T>C

Select item 146739848513.

rs1467398485 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: X:118384484 (GRCh38)
X:117518447 (GRCh37)
Canonical SPDI:: NC_000023.11:118384483:T:A
Gene:: WDR44 (Varview), MIR1277 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000019/2 (GnomAD)
A=0.000019/5 (TOPMED)
HGVS:: NC_000023.11:g.118384484T>A, NC_000023.10:g.117518447T>A, NG_021368.2:g.43412T>A

Select item 146662674814.

rs1466626748 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:118386565 (GRCh38)
X:117520528 (GRCh37)
Canonical SPDI:: NC_000023.11:118386564:A:G
Gene:: WDR44 (Varview), MIR1277 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.118386565A>G, NC_000023.10:g.117520528A>G, NG_021368.2:g.45493A>G

Select item 146626224715.

rs1466262247 has merged into rs370670319 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAA>-,AAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA [Show Flanks]
Chromosome:: X:118385663 (GRCh38)
X:117519626 (GRCh37)
Canonical SPDI:: NC_000023.11:118385657:AAAAAAAAAAA:AAAAA,NC_000023.11:118385657:AAAAAAAAAAA:AAAAAAAAAA,NC_000023.11:118385657:AAAAAAAAAAA:AAAAAAAAAAAA,NC_000023.11:118385657:AAAAAAAAAAA:AAAAAAAAAAAAA,NC_000023.11:118385657:AAAAAAAAAAA:AAAAAAAAAAAAAA
Gene:: WDR44 (Varview), MIR1277 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000023.11:g.118385663_118385668del, NC_000023.11:g.118385668del, NC_000023.11:g.118385668dup, NC_000023.11:g.118385667_118385668dup, NC_000023.11:g.118385666_118385668dup, NC_000023.10:g.117519626_117519631del, NC_000023.10:g.117519631del, NC_000023.10:g.117519631dup, NC_000023.10:g.117519630_117519631dup, NC_000023.10:g.117519629_117519631dup, NG_021368.2:g.44591_44596del, NG_021368.2:g.44596del, NG_021368.2:g.44596dup, NG_021368.2:g.44595_44596dup, NG_021368.2:g.44594_44596dup

Select item 146204570216.

rs1462045702 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: X:118385970 (GRCh38)
X:117519934 (GRCh37)
Canonical SPDI:: NC_000023.11:118385970:T:TT
Gene:: WDR44 (Varview), MIR1277 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TT=0./0 (ALFA)
T=0.000042/11 (TOPMED)
T=0.000048/5 (GnomAD)
HGVS:: NC_000023.11:g.118385971dup, NC_000023.10:g.117519934dup, NG_021368.2:g.44899dup

Select item 145757655217.

rs1457576552 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:118385942 (GRCh38)
X:117519905 (GRCh37)
Canonical SPDI:: NC_000023.11:118385941:A:G
Gene:: WDR44 (Varview), MIR1277 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.118385942A>G, NC_000023.10:g.117519905A>G, NG_021368.2:g.44870A>G

Select item 145625055918.

rs1456250559 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: X:118386643 (GRCh38)
X:117520606 (GRCh37)
Canonical SPDI:: NC_000023.11:118386642:G:A
Gene:: WDR44 (Varview), MIR1277 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000019/2 (GnomAD)
HGVS:: NC_000023.11:g.118386643G>A, NC_000023.10:g.117520606G>A, NG_021368.2:g.45571G>A

Select item 145518209119.

rs1455182091 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: X:118386759 (GRCh38)
X:117520722 (GRCh37)
Canonical SPDI:: NC_000023.11:118386758:A:G
Gene:: WDR44 (Varview), MIR1277 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant,intron_variant
Validated:: by frequency
MAF:: G=0.00001/1 (GnomAD)
HGVS:: NC_000023.11:g.118386759A>G, NC_000023.10:g.117520722A>G, NG_021368.2:g.45687A>G

Select item 145489748520.

rs1454897485 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G,T [Show Flanks]
Chromosome:: X:118386553 (GRCh38)
X:117520516 (GRCh37)
Canonical SPDI:: NC_000023.11:118386552:A:C,NC_000023.11:118386552:A:G,NC_000023.11:118386552:A:T
Gene:: WDR44 (Varview), MIR1277 (Varview)
Functional Consequence:: intron_variant,downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.00001/1 (GnomAD)
C=0.000495/6 (TOMMO)
C=0.000684/2 (KOREAN)
HGVS:: NC_000023.11:g.118386553A>C, NC_000023.11:g.118386553A>G, NC_000023.11:g.118386553A>T, NC_000023.10:g.117520516A>C, NC_000023.10:g.117520516A>G, NC_000023.10:g.117520516A>T, NG_021368.2:g.45481A>C, NG_021368.2:g.45481A>G, NG_021368.2:g.45481A>T