SNP Links for Gene (Select 100302277) - SNP

Links from Gene

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Select item 14907479481.

rs1490747948 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:9555845 (GRCh38)
4:9557466 (GRCh37)
Canonical SPDI:: NC_000004.12:9555844:C:T
Gene:: MIR548I2 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.9555845C>T, NC_000004.11:g.9557466C>T

Select item 14905955152.

rs1490595515 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 4:9556650 (GRCh38)
4:9558271 (GRCh37)
Canonical SPDI:: NC_000004.12:9556649:A:C,NC_000004.12:9556649:A:G
Gene:: MIR548I2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
HGVS:: NC_000004.12:g.9556650A>C, NC_000004.12:g.9556650A>G, NC_000004.11:g.9558271A>C, NC_000004.11:g.9558271A>G

Select item 14898532953.

rs1489853295 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 4:9557433 (GRCh38)
4:9559054 (GRCh37)
Canonical SPDI:: NC_000004.12:9557432:A:T
Gene:: MIR548I2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000019/5 (TOPMED)
T=0.000036/5 (GnomAD)
HGVS:: NC_000004.12:g.9557433A>T, NC_000004.11:g.9559054A>T

Select item 14894418664.

rs1489441866 [Homo sapiens]

Variant type:: DEL
Alleles:: T>- [Show Flanks]
Chromosome:: 4:9557172 (GRCh38)
4:9558793 (GRCh37)
Canonical SPDI:: NC_000004.12:9557171:T:
Gene:: MIR548I2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000004.12:g.9557172del, NC_000004.11:g.9558793del

Select item 14879183525.

rs1487918352 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 4:9557358 (GRCh38)
4:9558979 (GRCh37)
Canonical SPDI:: NC_000004.12:9557357:G:C
Gene:: MIR548I2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.9557358G>C, NC_000004.11:g.9558979G>C

Select item 14878452326.

rs1487845232 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:9557765 (GRCh38)
4:9559386 (GRCh37)
Canonical SPDI:: NC_000004.12:9557764:C:T
Gene:: MIR548I2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000011/3 (TOPMED)
HGVS:: NC_000004.12:g.9557765C>T, NC_000004.11:g.9559386C>T

Select item 14876292337.

rs1487629233 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:9558200 (GRCh38)
4:9559821 (GRCh37)
Canonical SPDI:: NC_000004.12:9558199:A:G
Gene:: MIR548I2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.9558200A>G, NC_000004.11:g.9559821A>G

Select item 14869892628.

rs1486989262 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 4:9556602 (GRCh38)
4:9558223 (GRCh37)
Canonical SPDI:: NC_000004.12:9556601:T:A
Gene:: MIR548I2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.9556602T>A, NC_000004.11:g.9558223T>A

Select item 14867091869.

rs1486709186 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 4:9555775 (GRCh38)
4:9557396 (GRCh37)
Canonical SPDI:: NC_000004.12:9555774:A:C,NC_000004.12:9555774:A:G
Gene:: MIR548I2 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.9555775A>C, NC_000004.12:g.9555775A>G, NC_000004.11:g.9557396A>C, NC_000004.11:g.9557396A>G

Select item 148588399310.

rs1485883993 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:9558249 (GRCh38)
4:9559870 (GRCh37)
Canonical SPDI:: NC_000004.12:9558248:A:G
Gene:: MIR548I2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.9558249A>G, NC_000004.11:g.9559870A>G

Select item 148566483211.

rs1485664832 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G,T [Show Flanks]
Chromosome:: 4:9556676 (GRCh38)
4:9558297 (GRCh37)
Canonical SPDI:: NC_000004.12:9556675:A:C,NC_000004.12:9556675:A:G,NC_000004.12:9556675:A:T
Gene:: MIR548I2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000004.12:g.9556676A>C, NC_000004.12:g.9556676A>G, NC_000004.12:g.9556676A>T, NC_000004.11:g.9558297A>C, NC_000004.11:g.9558297A>G, NC_000004.11:g.9558297A>T

Select item 148474295812.

rs1484742958 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 4:9556832 (GRCh38)
4:9558453 (GRCh37)
Canonical SPDI:: NC_000004.12:9556831:G:A,NC_000004.12:9556831:G:T
Gene:: MIR548I2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00055/1 (Korea1K)
HGVS:: NC_000004.12:g.9556832G>A, NC_000004.12:g.9556832G>T, NC_000004.11:g.9558453G>A, NC_000004.11:g.9558453G>T

Select item 148291091513.

rs1482910915 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G [Show Flanks]
Chromosome:: 4:9557517 (GRCh38)
4:9559138 (GRCh37)
Canonical SPDI:: NC_000004.12:9557516:C:A,NC_000004.12:9557516:C:G
Gene:: MIR548I2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
A=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.9557517C>A, NC_000004.12:g.9557517C>G, NC_000004.11:g.9559138C>A, NC_000004.11:g.9559138C>G

Select item 148120175114.

rs1481201751 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:9555895 (GRCh38)
4:9557516 (GRCh37)
Canonical SPDI:: NC_000004.12:9555894:G:A
Gene:: MIR548I2 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.9555895G>A, NC_000004.11:g.9557516G>A

Select item 147934614815.

rs1479346148 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: 4:9557240 (GRCh38)
4:9558862 (GRCh37)
Canonical SPDI:: NC_000004.12:9557240:C:CC
Gene:: MIR548I2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CC=0./0 (ALFA)
C=0.000034/9 (TOPMED)
C=0.000156/1 (1000Genomes)
HGVS:: NC_000004.12:g.9557241dup, NC_000004.11:g.9558862dup

Select item 147927109516.

rs1479271095 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 4:9556941 (GRCh38)
4:9558562 (GRCh37)
Canonical SPDI:: NC_000004.12:9556940:G:C
Gene:: MIR548I2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000004.12:g.9556941G>C, NC_000004.11:g.9558562G>C

Select item 147880181217.

rs1478801812 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:9555973 (GRCh38)
4:9557594 (GRCh37)
Canonical SPDI:: NC_000004.12:9555972:A:G
Gene:: MIR548I2 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000015/4 (TOPMED)
G=0.000021/3 (GnomAD)
G=0.000035/1 (TOMMO)
HGVS:: NC_000004.12:g.9555973A>G, NC_000004.11:g.9557594A>G

Select item 147873132418.

rs1478731324 [Homo sapiens]

Variant type:: DELINS
Alleles:: AG>- [Show Flanks]
Chromosome:: 4:9557127 (GRCh38)
4:9558748 (GRCh37)
Canonical SPDI:: NC_000004.12:9557124:AGAG:AG
Gene:: MIR548I2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AGAG=0./0 (ALFA)
-=0.000011/3 (TOPMED)
-=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.9557125AG[1], NC_000004.11:g.9558746AG[1]

Select item 147702986319.

rs1477029863 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:9558060 (GRCh38)
4:9559681 (GRCh37)
Canonical SPDI:: NC_000004.12:9558059:T:C
Gene:: MIR548I2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000026/7 (TOPMED)
HGVS:: NC_000004.12:g.9558060T>C, NC_000004.11:g.9559681T>C

Select item 147675660620.

rs1476756606 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 4:9558306 (GRCh38)
4:9559927 (GRCh37)
Canonical SPDI:: NC_000004.12:9558305:T:A
Gene:: MIR548I2 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.9558306T>A, NC_000004.11:g.9559927T>A

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