SNP Links for Gene (Select 100507127) - SNP

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Select item 14915863131.

rs1491586313 has merged into rs796365353 [Homo sapiens]

Variant type:: DELINS
Alleles:: GA>- [Show Flanks]
Chromosome:: 10:6778718 (GRCh38)
10:6820680 (GRCh37)
Canonical SPDI:: NC_000010.11:6778709:GAGAGAGAGA:GAGAGAGA
Gene:: LINC00707 (Varview), LINC00706 (Varview)
Functional Consequence:: upstream_transcript_variant,intron_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GAGAGAGA=0.014424/235 (ALFA)
-=0.005666/94 (TOMMO)
-=0.012582/23 (Korea1K)
-=0.013378/8 (NorthernSweden)
-=0.022055/85 (ALSPAC)
-=0.024272/90 (TWINSUK)
-=0.038573/4552 (GnomAD)
HGVS:: NC_000010.11:g.6778710GA[4], NC_000010.10:g.6820672GA[4]

Select item 14915762772.

rs1491576277 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CATATATACATGTATACG,CATATATACATGTATAGG,CATATATATACATGTATGTATATGCATATATACATGTATACG [Show Flanks]
Chromosome:: 10:6836593 (GRCh38)
10:6878556 (GRCh37)
Canonical SPDI:: NC_000010.11:6836593:G:GCATATATACATGTATACG,NC_000010.11:6836593:G:GCATATATACATGTATAGG,NC_000010.11:6836593:G:GCATATATATACATGTATGTATATGCATATATACATGTATACG
Gene:: LINC00707 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GCATATATACATGTATAGG=0./0 (ALFA)
GCATATATACATGTATAG=0.000004/1 (TOPMED)
GCATATATATACATGTATGTATATGCATATATACATGTATAC=0.000008/1 (GnomAD)
HGVS:: NC_000010.11:g.6836594_6836595insCATATATACATGTATACG, NC_000010.11:g.6836594_6836595insCATATATACATGTATAGG, NC_000010.11:g.6836594_6836595insCATATATATACATGTATGTATATGCATATATACATGTATACG, NC_000010.10:g.6878556_6878557insCATATATACATGTATACG, NC_000010.10:g.6878556_6878557insCATATATACATGTATAGG, NC_000010.10:g.6878556_6878557insCATATATATACATGTATGTATATGCATATATACATGTATACG

Select item 14915679753.

rs1491567975 [Homo sapiens]

Variant type:: DEL
Alleles:: TT>- [Show Flanks]
Chromosome:: 10:6838953 (GRCh38)
10:6880915 (GRCh37)
Canonical SPDI:: NC_000010.11:6838952:TT:
Gene:: LINC00707 (Varview), LOC105376387 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.000071/1 (ALFA)
-=0.000011/3 (TOPMED)
-=0.000014/2 (GnomAD)
HGVS:: NC_000010.11:g.6838953_6838954del, NC_000010.10:g.6880915_6880916del

Select item 14915557874.

rs1491555787 [Homo sapiens]

Variant type:: DELINS
Alleles:: AT>- [Show Flanks]
Chromosome:: 10:6836586 (GRCh38)
10:6878548 (GRCh37)
Canonical SPDI:: NC_000010.11:6836584:TAT:T
Gene:: LINC00707 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
-=0.000011/3 (TOPMED)
HGVS:: NC_000010.11:g.6836586_6836587del, NC_000010.10:g.6878548_6878549del

Select item 14915385105.

rs1491538510 [Homo sapiens]

Variant type:: DELINS
Alleles:: TA>- [Show Flanks]
Chromosome:: 10:6835822 (GRCh38)
10:6877784 (GRCh37)
Canonical SPDI:: NC_000010.11:6835820:ATA:A
Gene:: LINC00707 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
-=0.000041/5 (GnomAD)
HGVS:: NC_000010.11:g.6835822_6835823del, NC_000010.10:g.6877784_6877785del

Select item 14915364396.

rs1491536439 [Homo sapiens]

Variant type:: DELINS
Alleles:: TA>- [Show Flanks]
Chromosome:: 10:6835662 (GRCh38)
10:6877624 (GRCh37)
Canonical SPDI:: NC_000010.11:6835655:TATATATA:TATATA
Gene:: LINC00707 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TATATA=0./0 (ALFA)
HGVS:: NC_000010.11:g.6835656TA[3], NC_000010.10:g.6877618TA[3]

Select item 14915309227.

rs1491530922 [Homo sapiens]

Variant type:: DEL
Alleles:: GG>- [Show Flanks]
Chromosome:: 10:6834976 (GRCh38)
10:6876938 (GRCh37)
Canonical SPDI:: NC_000010.11:6834975:GG:
Gene:: LINC00707 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000010.11:g.6834976_6834977del, NC_000010.10:g.6876938_6876939del

Select item 14915308338.

rs1491530833 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AATAA [Show Flanks]
Chromosome:: 10:6834987 (GRCh38)
10:6876950 (GRCh37)
Canonical SPDI:: NC_000010.11:6834987:AA:AAAATAA
Gene:: LINC00707 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: AAAATAA=0.00194/23 (ALFA)
AAAAT=0.00106/28 (GnomAD)
HGVS:: NC_000010.11:g.6834988_6834989A[4]TAA[1], NC_000010.10:g.6876950_6876951A[4]TAA[1]

Select item 14915018189.

rs1491501818 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CATGTATATATGCATATACATACATGTATATATATGACATATA [Show Flanks]
Chromosome:: 10:6836595 (GRCh38)
10:6878558 (GRCh37)
Canonical SPDI:: NC_000010.11:6836595:ACATATA:ACATATACATGTATATATGCATATACATACATGTATATATATGACATATA
Gene:: LINC00707 (Varview)
Functional Consequence:: intron_variant
Validated:: by cluster
HGVS:: NC_000010.11:g.6836602_6836603insCATGTATATATGCATATACATACATGTATATATATGACATATA, NC_000010.10:g.6878564_6878565insCATGTATATATGCATATACATACATGTATATATATGACATATA

Select item 149143271710.

rs1491432717 [Homo sapiens]

Variant type:: DELINS
Alleles:: GT>- [Show Flanks]
Chromosome:: 10:6836594 (GRCh38)
10:6878556 (GRCh37)
Canonical SPDI:: NC_000010.11:6836592:TGT:T
Gene:: LINC00707 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000010.11:g.6836594_6836595del, NC_000010.10:g.6878556_6878557del

Select item 149140936811.

rs1491409368 has merged into rs140133886 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATAT>-,AT,ATATAT,ATATATACATATGTATACATATATATAT,ATATATAT,ATATATATAT,ATATATATGCATATGTATATACATATGTATACATATATATAT,ATATATGCATATATATAT,ATATATGCATATGTATATACATATGTATACACATGCATATGTATATACATATGTATACATATATATAT,ATATATGCATATGTATATACATATGTATACACATGTATATACATATGTATACATATATATAT,ATATATGCATATGTATATACATATGTATACATATATATAT,ATATATGTATATACATATGTATACATATATATAT [Show Flanks]
Chromosome:: 10:6836804 (GRCh38)
10:6878766 (GRCh37)
Canonical SPDI:: NC_000010.11:6836799:ATATATAT:ATAT,NC_000010.11:6836799:ATATATAT:ATATAT,NC_000010.11:6836799:ATATATAT:ATATATATAT,NC_000010.11:6836799:ATATATAT:ATATATATATACATATGTATACATATATATAT,NC_000010.11:6836799:ATATATAT:ATATATATATAT,NC_000010.11:6836799:ATATATAT:ATATATATATATAT,NC_000010.11:6836799:ATATATAT:ATATATATATATGCATATGTATATACATATGTATACATATATATAT,NC_000010.11:6836799:ATATATAT:ATATATATATGCATATATATAT,NC_000010.11:6836799:ATATATAT:ATATATATATGCATATGTATATACATATGTATACACATGCATATGTATATACATATGTATACATATATATAT,NC_000010.11:6836799:ATATATAT:ATATATATATGCATATGTATATACATATGTATACACATGTATATACATATGTATACATATATATAT,NC_000010.11:6836799:ATATATAT:ATATATATATGCATATGTATATACATATGTATACATATATATAT,NC_000010.11:6836799:ATATATAT:ATATATATATGTATATACATATGTATACATATATATAT
Gene:: LINC00707 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATATATATATACATATGTATACATATATATAT=0./0 (ALFA)
HGVS:: NC_000010.11:g.6836800AT[2], NC_000010.11:g.6836800AT[3], NC_000010.11:g.6836800AT[5], NC_000010.11:g.6836800_6836807AT[5]ACATATGTATACATATATATAT[1], NC_000010.11:g.6836800AT[6], NC_000010.11:g.6836800AT[7], NC_000010.11:g.6836800_6836807AT[6]GCATATGTATATACATATGTATACATATATATAT[1], NC_000010.11:g.6836800_6836807AT[5]GCATATATATAT[1], NC_000010.11:g.6836800_6836807AT[5]GCATATGTATATACATATGTATACACATGCATATGTATATACATATGTATACATATATATAT[1], NC_000010.11:g.6836800_6836807AT[5]GCATATGTATATACATATGTATACACATGTATATACATATGTATACATATATATAT[1], NC_000010.11:g.6836800_6836807AT[5]GCATATGTATATACATATGTATACATATATATAT[1], NC_000010.11:g.6836800_6836807AT[5]GTATATACATATGTATACATATATATAT[1], NC_000010.10:g.6878762AT[2], NC_000010.10:g.6878762AT[3], NC_000010.10:g.6878762AT[5], NC_000010.10:g.6878762_6878769AT[5]ACATATGTATACATATATATAT[1], NC_000010.10:g.6878762AT[6], NC_000010.10:g.6878762AT[7], NC_000010.10:g.6878762_6878769AT[6]GCATATGTATATACATATGTATACATATATATAT[1], NC_000010.10:g.6878762_6878769AT[5]GCATATATATAT[1], NC_000010.10:g.6878762_6878769AT[5]GCATATGTATATACATATGTATACACATGCATATGTATATACATATGTATACATATATATAT[1], NC_000010.10:g.6878762_6878769AT[5]GCATATGTATATACATATGTATACACATGTATATACATATGTATACATATATATAT[1], NC_000010.10:g.6878762_6878769AT[5]GCATATGTATATACATATGTATACATATATATAT[1], NC_000010.10:g.6878762_6878769AT[5]GTATATACATATGTATACATATATATAT[1]

Select item 149140793912.

rs1491407939 [Homo sapiens]

Variant type:: INS
Alleles:: ->GA,GAA,GAAA,GAAAA,GAAAAA,GAAAAAA,GAAAAAAA,GAAAAAAAA,GAAAAAAAAA,GAAAAAAAAAA,GAAAAAAAAAAA,GAAAAAAAAAAAA,GAAAAAAAAAAAAA,GAAAAAAAAAAAAAA,GAAAAAAAAAAAAAAA,GAAAAAAAAAAAAAAAA,GAAAAAAAAAAAAAAAAA,GAAAAAAAAAAAAAAAAAA,GAAAAAAAAAAAAAAAAAAA,GAAAAAAAAAAAAAAAAAAAA,GAAAAAAAAAAAAAAAAAAAAA,GAAAAAAAAAAAAAAAAAAAAAA,GAAAAAAAAAAAAAAAAAAAAAAA,GAAAAAAAAAAAAAAAAAAAAAAAA,GAAAAAAAAAAAAAAAAAAAAAAAAA,GAAAAAAAAAAAAAAAAAAAAAAAAAA,GAAAAAAAAAAAAAAAAAAAAAAAAAAA,GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,GGAAAAAAA,GGAAAAAAAA,TAAAAAAAA [Show Flanks]
Chromosome:: 10:6780955 (GRCh38)
10:6822918 (GRCh37)
Canonical SPDI:: NC_000010.11:6780955::GA,NC_000010.11:6780955::GAA,NC_000010.11:6780955::GAAA,NC_000010.11:6780955::GAAAA,NC_000010.11:6780955::GAAAAA,NC_000010.11:6780955::GAAAAAA,NC_000010.11:6780955::GAAAAAAA,NC_000010.11:6780955::GAAAAAAAA,NC_000010.11:6780955::GAAAAAAAAA,NC_000010.11:6780955::GAAAAAAAAAA,NC_000010.11:6780955::GAAAAAAAAAAA,NC_000010.11:6780955::GAAAAAAAAAAAA,NC_000010.11:6780955::GAAAAAAAAAAAAA,NC_000010.11:6780955::GAAAAAAAAAAAAAA,NC_000010.11:6780955::GAAAAAAAAAAAAAAA,NC_000010.11:6780955::GAAAAAAAAAAAAAAAA,NC_000010.11:6780955::GAAAAAAAAAAAAAAAAA,NC_000010.11:6780955::GAAAAAAAAAAAAAAAAAA,NC_000010.11:6780955::GAAAAAAAAAAAAAAAAAAA,NC_000010.11:6780955::GAAAAAAAAAAAAAAAAAAAA,NC_000010.11:6780955::GAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:6780955::GAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:6780955::GAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:6780955::GAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:6780955::GAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:6780955::GAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:6780955::GAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:6780955::GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:6780955::GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:6780955::GAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:6780955::GGAAAAAAA,NC_000010.11:6780955::GGAAAAAAAA,NC_000010.11:6780955::TAAAAAAAA
Gene:: LINC00707 (Varview), LINC00706 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GAA=0./0 (ALFA)
HGVS:: NC_000010.11:g.6780955_6780956insGA, NC_000010.11:g.6780955_6780956insGAA, NC_000010.11:g.6780955_6780956insGAAA, NC_000010.11:g.6780955_6780956insGAAAA, NC_000010.11:g.6780955_6780956insGAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAAAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAAAAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAAAAAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAAAAAAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAAAAAAAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAAAAAAAAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.6780955_6780956insGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.11:g.6780955_6780956insGGAAAAAAA, NC_000010.11:g.6780955_6780956insGGAAAAAAAA, NC_000010.11:g.6780955_6780956insTAAAAAAAA, NC_000010.10:g.6822917_6822918insGA, NC_000010.10:g.6822917_6822918insGAA, NC_000010.10:g.6822917_6822918insGAAA, NC_000010.10:g.6822917_6822918insGAAAA, NC_000010.10:g.6822917_6822918insGAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAAAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAAAAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAAAAAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAAAAAAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAAAAAAAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAAAAAAAAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.6822917_6822918insGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA, NC_000010.10:g.6822917_6822918insGGAAAAAAA, NC_000010.10:g.6822917_6822918insGGAAAAAAAA, NC_000010.10:g.6822917_6822918insTAAAAAAAA

Select item 149140355513.

rs1491403555 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AGTATA,AGTATAATTATA [Show Flanks]
Chromosome:: 10:6837696 (GRCh38)
10:6879659 (GRCh37)
Canonical SPDI:: NC_000010.11:6837696:TATA:TATAAGTATA,NC_000010.11:6837696:TATA:TATAAGTATAATTATA
Gene:: LINC00707 (Varview), LOC105376387 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TATAAGTATAATTATA=0./0 (ALFA)
TATAAGTATAAT=0.000004/1 (TOPMED)
TATAAG=0.000008/1 (GnomAD)
HGVS:: NC_000010.11:g.6837697_6837700TA[2]AGTATA[1], NC_000010.11:g.6837697_6837700TA[2]AGTATAATTATA[1], NC_000010.10:g.6879659_6879662TA[2]AGTATA[1], NC_000010.10:g.6879659_6879662TA[2]AGTATAATTATA[1]

Select item 149139319714.

rs1491393197 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->ATATATAC [Show Flanks]
Chromosome:: 10:6836970 (GRCh38)
10:6878933 (GRCh37)
Canonical SPDI:: NC_000010.11:6836970:C:CATATATAC
Gene:: LINC00707 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CATATATAC=0./0 (ALFA)
CATATATA=0.00266/12 (TOMMO)
CATATATA=0.05747/698 (GnomAD)
HGVS:: NC_000010.11:g.6836971_6836972insATATATAC, NC_000010.10:g.6878933_6878934insATATATAC

Select item 149136349415.

rs1491363494 [Homo sapiens]

Variant type:: INS
Alleles:: ->T,TTT,TTTCTTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 10:6816587 (GRCh38)
10:6858550 (GRCh37)
Canonical SPDI:: NC_000010.11:6816587::T,NC_000010.11:6816587::TTT,NC_000010.11:6816587::TTTCTTT,NC_000010.11:6816587::TTTT,NC_000010.11:6816587::TTTTT,NC_000010.11:6816587::TTTTTT,NC_000010.11:6816587::TTTTTTT,NC_000010.11:6816587::TTTTTTTT,NC_000010.11:6816587::TTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:6816587::TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: LINC00707 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTCTTT=0./0 (ALFA)
TTT=0.00125/2 (Korea1K)
TTT=0.00393/50 (TOMMO)
HGVS:: NC_000010.11:g.6816587_6816588insT, NC_000010.11:g.6816587_6816588insTTT, NC_000010.11:g.6816587_6816588insTTTCTTT, NC_000010.11:g.6816587_6816588insTTTT, NC_000010.11:g.6816587_6816588insTTTTT, NC_000010.11:g.6816587_6816588insTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.6816587_6816588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insT, NC_000010.10:g.6858549_6858550insTTT, NC_000010.10:g.6858549_6858550insTTTCTTT, NC_000010.10:g.6858549_6858550insTTTT, NC_000010.10:g.6858549_6858550insTTTTT, NC_000010.10:g.6858549_6858550insTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.6858549_6858550insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT

Select item 149133811216.

rs1491338112 [Homo sapiens]

Variant type:: DEL
Alleles:: GG>- [Show Flanks]
Chromosome:: 10:6834984 (GRCh38)
10:6876946 (GRCh37)
Canonical SPDI:: NC_000010.11:6834983:GG:
Gene:: LINC00707 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000010.11:g.6834984_6834985del, NC_000010.10:g.6876946_6876947del

Select item 149132715417.

rs1491327154 [Homo sapiens]

Variant type:: DELINS
Alleles:: AT>-,ATAT [Show Flanks]
Chromosome:: 10:6836992 (GRCh38)
10:6878954 (GRCh37)
Canonical SPDI:: NC_000010.11:6836985:ATATATAT:ATATAT,NC_000010.11:6836985:ATATATAT:ATATATATAT
Gene:: LINC00707 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATATATATAT=0./0 (ALFA)
HGVS:: NC_000010.11:g.6836986AT[3], NC_000010.11:g.6836986AT[5], NC_000010.10:g.6878948AT[3], NC_000010.10:g.6878948AT[5]

Select item 149131270218.

rs1491312702 [Homo sapiens]

Variant type:: DEL
Alleles:: AT>- [Show Flanks]
Chromosome:: 10:6840366 (GRCh38)
10:6882328 (GRCh37)
Canonical SPDI:: NC_000010.11:6840365:AT:
Gene:: LINC00707 (Varview), LOC105376387 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000010.11:g.6840366_6840367del, NC_000010.10:g.6882328_6882329del

Select item 149126865119.

rs1491268651 has merged into rs1267103428 [Homo sapiens]

Variant type:: DELINS
Alleles:: AA>-,A,AAAA,AAAAAAA,AAAAAAAA [Show Flanks]
Chromosome:: 10:6834988 (GRCh38)
10:6876950 (GRCh37)
Canonical SPDI:: NC_000010.11:6834986:AAA:A,NC_000010.11:6834986:AAA:AA,NC_000010.11:6834986:AAA:AAAAA,NC_000010.11:6834986:AAA:AAAAAAAA,NC_000010.11:6834986:AAA:AAAAAAAAA
Gene:: LINC00707 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000010.11:g.6834988_6834989del, NC_000010.11:g.6834989del, NC_000010.11:g.6834988_6834989dup, NC_000010.11:g.6834989_6834990insAAAAA, NC_000010.11:g.6834989_6834990insAAAAAA, NC_000010.10:g.6876950_6876951del, NC_000010.10:g.6876951del, NC_000010.10:g.6876950_6876951dup, NC_000010.10:g.6876951_6876952insAAAAA, NC_000010.10:g.6876951_6876952insAAAAAA

Select item 149121881520.

rs1491218815 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CATATATA [Show Flanks]
Chromosome:: 10:6836984 (GRCh38)
10:6878947 (GRCh37)
Canonical SPDI:: NC_000010.11:6836984:CATATATA:CATATATACATATATA
Gene:: LINC00707 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: CATATATACATATATA=0./0 (ALFA)
CATATATA=0.00147/3 (GnomAD)
HGVS:: NC_000010.11:g.6836985_6836992dup, NC_000010.10:g.6878947_6878954dup

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