Links from Gene
Items: 1 to 20 of 5243
1.
rs1491458051 has merged into rs35877406 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTT>-,T,TT,TTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 12:92467743
(GRCh38)
12:92861519
(GRCh37)
- Canonical SPDI:
- NC_000012.12:92467729:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000012.12:92467729:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000012.12:92467729:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000012.12:92467729:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000012.12:92467729:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000012.12:92467729:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000012.12:92467729:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000012.12:92467729:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000012.12:92467729:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000012.12:92467729:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- LINC02397 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTTTTTTTTTTTT=0./0
(
ALFA)
T=0.2095/1049
(1000Genomes)
- HGVS:
NC_000012.12:g.92467743_92467746del, NC_000012.12:g.92467744_92467746del, NC_000012.12:g.92467745_92467746del, NC_000012.12:g.92467746del, NC_000012.12:g.92467746dup, NC_000012.12:g.92467745_92467746dup, NC_000012.12:g.92467744_92467746dup, NC_000012.12:g.92467743_92467746dup, NC_000012.12:g.92467742_92467746dup, NC_000012.12:g.92467739_92467746dup, NC_000012.11:g.92861519_92861522del, NC_000012.11:g.92861520_92861522del, NC_000012.11:g.92861521_92861522del, NC_000012.11:g.92861522del, NC_000012.11:g.92861522dup, NC_000012.11:g.92861521_92861522dup, NC_000012.11:g.92861520_92861522dup, NC_000012.11:g.92861519_92861522dup, NC_000012.11:g.92861518_92861522dup, NC_000012.11:g.92861515_92861522dup
2.
rs1491284454 has merged into rs35877406 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTT>-,T,TT,TTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 12:92467743
(GRCh38)
12:92861519
(GRCh37)
- Canonical SPDI:
- NC_000012.12:92467729:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000012.12:92467729:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000012.12:92467729:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000012.12:92467729:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000012.12:92467729:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000012.12:92467729:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000012.12:92467729:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000012.12:92467729:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000012.12:92467729:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000012.12:92467729:TTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- LINC02397 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTTTTTTTTTTTT=0./0
(
ALFA)
T=0.2095/1049
(1000Genomes)
- HGVS:
NC_000012.12:g.92467743_92467746del, NC_000012.12:g.92467744_92467746del, NC_000012.12:g.92467745_92467746del, NC_000012.12:g.92467746del, NC_000012.12:g.92467746dup, NC_000012.12:g.92467745_92467746dup, NC_000012.12:g.92467744_92467746dup, NC_000012.12:g.92467743_92467746dup, NC_000012.12:g.92467742_92467746dup, NC_000012.12:g.92467739_92467746dup, NC_000012.11:g.92861519_92861522del, NC_000012.11:g.92861520_92861522del, NC_000012.11:g.92861521_92861522del, NC_000012.11:g.92861522del, NC_000012.11:g.92861522dup, NC_000012.11:g.92861521_92861522dup, NC_000012.11:g.92861520_92861522dup, NC_000012.11:g.92861519_92861522dup, NC_000012.11:g.92861518_92861522dup, NC_000012.11:g.92861515_92861522dup
3.
rs1491186082 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->AT,ATAT,ATATAT,ATATATAT,ATATATATAT,ATATATATATAT,ATATATATATATAT,ATATATATATATATAAATAT,ATATATATATATATAT,ATATATATATATATATAT,ATATATATATATATATATAT,ATATATATATATATATATATAT,ATATATATATATATATATATATAT,ATATATATATATATATATATATATAT,ATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATAT,ATATATATATATATCTATATATAT
[Show Flanks]
- Chromosome:
- 12:92473112
(GRCh38)
12:92866889
(GRCh37)
- Canonical SPDI:
- NC_000012.12:92473112:T:TAT,NC_000012.12:92473112:T:TATAT,NC_000012.12:92473112:T:TATATAT,NC_000012.12:92473112:T:TATATATAT,NC_000012.12:92473112:T:TATATATATAT,NC_000012.12:92473112:T:TATATATATATAT,NC_000012.12:92473112:T:TATATATATATATAT,NC_000012.12:92473112:T:TATATATATATATATAAATAT,NC_000012.12:92473112:T:TATATATATATATATAT,NC_000012.12:92473112:T:TATATATATATATATATAT,NC_000012.12:92473112:T:TATATATATATATATATATAT,NC_000012.12:92473112:T:TATATATATATATATATATATAT,NC_000012.12:92473112:T:TATATATATATATATATATATATAT,NC_000012.12:92473112:T:TATATATATATATATATATATATATAT,NC_000012.12:92473112:T:TATATATATATATATATATATATATATAT,NC_000012.12:92473112:T:TATATATATATATATATATATATATATATAT,NC_000012.12:92473112:T:TATATATATATATATATATATATATATATATAT,NC_000012.12:92473112:T:TATATATATATATATATATATATATATATATATAT,NC_000012.12:92473112:T:TATATATATATATATCTATATATAT
- Gene:
- LINC02397 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000012.12:g.92473113_92473114insAT, NC_000012.12:g.92473113_92473114insATAT, NC_000012.12:g.92473114AT[3], NC_000012.12:g.92473114AT[4], NC_000012.12:g.92473114AT[5], NC_000012.12:g.92473114AT[6], NC_000012.12:g.92473114AT[7], NC_000012.12:g.92473113TA[8]AATAT[1], NC_000012.12:g.92473114AT[8], NC_000012.12:g.92473114AT[9], NC_000012.12:g.92473114AT[10], NC_000012.12:g.92473114AT[11], NC_000012.12:g.92473114AT[12], NC_000012.12:g.92473114AT[13], NC_000012.12:g.92473114AT[14], NC_000012.12:g.92473114AT[15], NC_000012.12:g.92473114AT[16], NC_000012.12:g.92473114AT[17], NC_000012.12:g.92473113TA[7]TCTATATATAT[1], NC_000012.11:g.92866889_92866890insAT, NC_000012.11:g.92866889_92866890insATAT, NC_000012.11:g.92866890AT[3], NC_000012.11:g.92866890AT[4], NC_000012.11:g.92866890AT[5], NC_000012.11:g.92866890AT[6], NC_000012.11:g.92866890AT[7], NC_000012.11:g.92866889TA[8]AATAT[1], NC_000012.11:g.92866890AT[8], NC_000012.11:g.92866890AT[9], NC_000012.11:g.92866890AT[10], NC_000012.11:g.92866890AT[11], NC_000012.11:g.92866890AT[12], NC_000012.11:g.92866890AT[13], NC_000012.11:g.92866890AT[14], NC_000012.11:g.92866890AT[15], NC_000012.11:g.92866890AT[16], NC_000012.11:g.92866890AT[17], NC_000012.11:g.92866889TA[7]TCTATATATAT[1]
4.
rs1491179314 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->GTAT,GTATATAT,GTATATATATATAT,GTATATATATATATAT,GTATATATATATATATAT,GTATATATATATATATATAT,GTATATATATATATATATATAT,GTATATATATATATATATATATAT,GTATATATATATATATATATATATAT,GTATATATATATATATATATATATATATAT,GTGTATATATATAT,GTGTATATATATATATATAT
[Show Flanks]
- Chromosome:
- 12:92473114
(GRCh38)
12:92866891
(GRCh37)
- Canonical SPDI:
- NC_000012.12:92473114:T:TGTAT,NC_000012.12:92473114:T:TGTATATAT,NC_000012.12:92473114:T:TGTATATATATATAT,NC_000012.12:92473114:T:TGTATATATATATATAT,NC_000012.12:92473114:T:TGTATATATATATATATAT,NC_000012.12:92473114:T:TGTATATATATATATATATAT,NC_000012.12:92473114:T:TGTATATATATATATATATATAT,NC_000012.12:92473114:T:TGTATATATATATATATATATATAT,NC_000012.12:92473114:T:TGTATATATATATATATATATATATAT,NC_000012.12:92473114:T:TGTATATATATATATATATATATATATATAT,NC_000012.12:92473114:T:TGTGTATATATATAT,NC_000012.12:92473114:T:TGTGTATATATATATATATAT
- Gene:
- LINC02397 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000012.12:g.92473115_92473116insGTAT, NC_000012.12:g.92473115_92473116insGTATATAT, NC_000012.12:g.92473115_92473116insGTATATATATATAT, NC_000012.12:g.92473115_92473116insGTATATATATATATAT, NC_000012.12:g.92473115_92473116insGTATATATATATATATAT, NC_000012.12:g.92473115_92473116insGTATATATATATATATATAT, NC_000012.12:g.92473115_92473116insGTATATATATATATATATATAT, NC_000012.12:g.92473115_92473116insGTATATATATATATATATATATAT, NC_000012.12:g.92473115_92473116insGTATATATATATATATATATATATAT, NC_000012.12:g.92473115_92473116insGTATATATATATATATATATATATATATAT, NC_000012.12:g.92473115TG[2]TA[5]T[1], NC_000012.12:g.92473115TG[2]TA[8]T[1], NC_000012.11:g.92866891_92866892insGTAT, NC_000012.11:g.92866891_92866892insGTATATAT, NC_000012.11:g.92866891_92866892insGTATATATATATAT, NC_000012.11:g.92866891_92866892insGTATATATATATATAT, NC_000012.11:g.92866891_92866892insGTATATATATATATATAT, NC_000012.11:g.92866891_92866892insGTATATATATATATATATAT, NC_000012.11:g.92866891_92866892insGTATATATATATATATATATAT, NC_000012.11:g.92866891_92866892insGTATATATATATATATATATATAT, NC_000012.11:g.92866891_92866892insGTATATATATATATATATATATATAT, NC_000012.11:g.92866891_92866892insGTATATATATATATATATATATATATATAT, NC_000012.11:g.92866891TG[2]TA[5]T[1], NC_000012.11:g.92866891TG[2]TA[8]T[1]
5.
rs1491148446 has merged into rs145379003 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GT>-,GTGT,GTGTGT
[Show Flanks]
- Chromosome:
- 12:92473114
(GRCh38)
12:92866890
(GRCh37)
- Canonical SPDI:
- NC_000012.12:92473111:GTGT:GT,NC_000012.12:92473111:GTGT:GTGTGT,NC_000012.12:92473111:GTGT:GTGTGTGT
- Gene:
- LINC02397 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GTGTGTGT=0./0
(
ALFA)
GTGT=0.000004/1
(TOPMED)
-=0.011749/181
(TOMMO)
-=0.246552/143
(NorthernSweden)
GT=0.420712/1560
(TWINSUK)
- HGVS:
6.
rs1491061198 has merged into rs35964865 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AA>-,A,AAA,AAAA
[Show Flanks]
- Chromosome:
- 12:92479904
(GRCh38)
12:92873680
(GRCh37)
- Canonical SPDI:
- NC_000012.12:92479893:AAAAAAAAAAAA:AAAAAAAAAA,NC_000012.12:92479893:AAAAAAAAAAAA:AAAAAAAAAAA,NC_000012.12:92479893:AAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000012.12:92479893:AAAAAAAAAAAA:AAAAAAAAAAAAAA
- Gene:
- LINC02397 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAAAAA=0./0
(
ALFA)
-=0.24361/1220
(1000Genomes)
- HGVS:
7.
rs1490977551 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 12:92476286
(GRCh38)
12:92870062
(GRCh37)
- Canonical SPDI:
- NC_000012.12:92476285:G:A
- Gene:
- LINC02397 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
A=0.000008/2
(TOPMED)
- HGVS:
10.
rs1490537291 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C
[Show Flanks]
- Chromosome:
- 12:92468703
(GRCh38)
12:92862479
(GRCh37)
- Canonical SPDI:
- NC_000012.12:92468702:A:C
- Gene:
- LINC02397 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
C=0.000007/1
(GnomAD)
- HGVS:
11.
rs1490521377 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>A,G
[Show Flanks]
- Chromosome:
- 12:92479289
(GRCh38)
12:92873065
(GRCh37)
- Canonical SPDI:
- NC_000012.12:92479288:T:A,NC_000012.12:92479288:T:G
- Gene:
- LINC02397 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
- HGVS:
13.
rs1490177796 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A,C
[Show Flanks]
- Chromosome:
- 12:92480581
(GRCh38)
12:92874357
(GRCh37)
- Canonical SPDI:
- NC_000012.12:92480580:G:A,NC_000012.12:92480580:G:C
- Gene:
- LINC02397 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
A=0.000007/1
(GnomAD)
- HGVS:
14.
rs1490030028 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C
[Show Flanks]
- Chromosome:
- 12:92478223
(GRCh38)
12:92871999
(GRCh37)
- Canonical SPDI:
- NC_000012.12:92478222:A:C
- Gene:
- LINC02397 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0.000071/1
(
ALFA)
C=0.00003/8
(TOPMED)
C=0.000036/5
(GnomAD)
- HGVS:
15.
rs1489962681 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 12:92485326
(GRCh38)
12:92879102
(GRCh37)
- Canonical SPDI:
- NC_000012.12:92485325:C:T
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000014/2
(GnomAD)
- HGVS:
16.
rs1489953154 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>T
[Show Flanks]
- Chromosome:
- 12:92470920
(GRCh38)
12:92864696
(GRCh37)
- Canonical SPDI:
- NC_000012.12:92470919:A:T
- Gene:
- LINC02397 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000004/1
(TOPMED)
- HGVS:
17.
rs1489679071 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 12:92477887
(GRCh38)
12:92871663
(GRCh37)
- Canonical SPDI:
- NC_000012.12:92477886:C:T
- Gene:
- LINC02397 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000014/2
(GnomAD)
T=0.000034/9
(TOPMED)
- HGVS:
18.
rs1489646009 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>T
[Show Flanks]
- Chromosome:
- 12:92475701
(GRCh38)
12:92869477
(GRCh37)
- Canonical SPDI:
- NC_000012.12:92475700:A:T
- Gene:
- LINC02397 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
- HGVS:
20.
rs1489554278 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>C
[Show Flanks]
- Chromosome:
- 12:92466653
(GRCh38)
12:92860429
(GRCh37)
- Canonical SPDI:
- NC_000012.12:92466652:A:C
- Gene:
- LINC02397 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0.000162/3
(
ALFA)
C=0.000008/2
(TOPMED)
C=0.000021/3
(GnomAD)
C=0.00067/3
(Estonian)
- HGVS: