SNP Links for Gene (Select 100507642) - SNP

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Select item 14904355231.

rs1490435523 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 7:149558 (GRCh38)
7:149558 (GRCh37)
Canonical SPDI:: NC_000007.14:149557:C:G,NC_000007.14:149557:C:T
Gene:: LINC03014 (Varview), LINC03015 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.149558C>G, NC_000007.14:g.149558C>T, NC_000007.13:g.149558C>G, NC_000007.13:g.149558C>T, NG_062482.1:g.490C>G, NG_062482.1:g.490C>T, NW_021159998.1:g.125246C>G, NW_021159998.1:g.125246C>T, NT_187653.1:g.141879C>G, NT_187653.1:g.141879C>T, NT_187558.1:g.105363C>G, NT_187558.1:g.105363C>T

Select item 14902372392.

rs1490237239 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 7:148834 (GRCh38)
7:148834 (GRCh37)
Canonical SPDI:: NC_000007.14:148833:T:C
Gene:: LINC03014 (Varview), LINC03015 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.148834T>C, NC_000007.13:g.148834T>C, NW_021159998.1:g.124522T>C, NT_187653.1:g.141155T>C, NT_187558.1:g.104634T>C

Select item 14895474933.

rs1489547493 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:153013 (GRCh38)
7:153013 (GRCh37)
Canonical SPDI:: NC_000007.14:153012:C:T
Gene:: LINC03014 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000007.14:g.153013C>T, NC_000007.13:g.153013C>T, NW_021159998.1:g.128701C>T, NT_187653.1:g.145334C>T, NT_187558.1:g.108818C>T

Select item 14894187874.

rs1489418787 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:154155 (GRCh38)
7:154155 (GRCh37)
Canonical SPDI:: NC_000007.14:154154:C:T
Gene:: LINC03014 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000007.14:g.154155C>T, NC_000007.13:g.154155C>T, NW_021159998.1:g.129843C>T, NT_187653.1:g.146476C>T, NT_187558.1:g.109960C>T, NR_108064.1:n.1269C>T, NR_108065.1:n.1162C>T

Select item 14893664425.

rs1489366442 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 7:153276 (GRCh38)
7:153276 (GRCh37)
Canonical SPDI:: NC_000007.14:153275:A:C
Gene:: LINC03014 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
HGVS:: NC_000007.14:g.153276A>C, NC_000007.13:g.153276A>C, NW_021159998.1:g.128964A>C, NT_187653.1:g.145597A>C, NT_187558.1:g.109081A>C

Select item 14891179376.

rs1489117937 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 7:148333 (GRCh38)
7:148333 (GRCh37)
Canonical SPDI:: NC_000007.14:148332:A:G
Gene:: LINC03014 (Varview), LINC03015 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
G=0.000014/2 (GnomAD)
G=0.000708/12 (TOMMO)
HGVS:: NC_000007.14:g.148333A>G, NC_000007.13:g.148333A>G, NW_021159998.1:g.124021A>G, NT_187653.1:g.140654A>G, NT_187558.1:g.104133A>G

Select item 14890458107.

rs1489045810 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 7:148418 (GRCh38)
7:148418 (GRCh37)
Canonical SPDI:: NC_000007.14:148417:A:G
Gene:: LINC03014 (Varview), LINC03015 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.148418A>G, NC_000007.13:g.148418A>G, NW_021159998.1:g.124106A>G, NT_187653.1:g.140739A>G, NT_187558.1:g.104218A>G

Select item 14888542068.

rs1488854206 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 7:148746 (GRCh38)
7:148746 (GRCh37)
Canonical SPDI:: NC_000007.14:148745:G:C
Gene:: LINC03014 (Varview), LINC03015 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000007.14:g.148746G>C, NC_000007.13:g.148746G>C, NW_021159998.1:g.124434G>C, NT_187653.1:g.141067G>C, NT_187558.1:g.104546G>C

Select item 14888135859.

rs1488813585 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C,T [Show Flanks]
Chromosome:: 7:149118 (GRCh38)
7:149118 (GRCh37)
Canonical SPDI:: NC_000007.14:149117:G:A,NC_000007.14:149117:G:C,NC_000007.14:149117:G:T
Gene:: LINC03014 (Varview), LINC03015 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
T=0.000014/2 (GnomAD)
C=0.000156/1 (1000Genomes)
HGVS:: NC_000007.14:g.149118G>A, NC_000007.14:g.149118G>C, NC_000007.14:g.149118G>T, NC_000007.13:g.149118G>A, NC_000007.13:g.149118G>C, NC_000007.13:g.149118G>T, NG_062482.1:g.50G>A, NG_062482.1:g.50G>C, NG_062482.1:g.50G>T, NW_021159998.1:g.124806G>A, NW_021159998.1:g.124806G>C, NW_021159998.1:g.124806G>T, NT_187653.1:g.141439G>A, NT_187653.1:g.141439G>C, NT_187653.1:g.141439G>T, NT_187558.1:g.104918G>A, NT_187558.1:g.104918G>C, NT_187558.1:g.104918G>T

Select item 148873298510.

rs1488732985 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:150418 (GRCh38)
7:150418 (GRCh37)
Canonical SPDI:: NC_000007.14:150417:C:T
Gene:: LINC03014 (Varview), LINC03015 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000007.14:g.150418C>T, NC_000007.13:g.150418C>T, NW_021159998.1:g.126106C>T, NT_187653.1:g.142739C>T, NT_187558.1:g.106223C>T

Select item 148833969111.

rs1488339691 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:155119 (GRCh38)
7:155119 (GRCh37)
Canonical SPDI:: NC_000007.14:155118:C:T
Gene:: LINC03014 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000019/5 (TOPMED)
HGVS:: NC_000007.14:g.155119C>T, NC_000007.13:g.155119C>T, NW_021159998.1:g.130807C>T, NT_187653.1:g.147440C>T, NT_187558.1:g.110924C>T, NR_108064.1:n.2233C>T, NR_108065.1:n.2126C>T

Select item 148829368512.

rs1488293685 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 7:154244 (GRCh38)
7:154244 (GRCh37)
Canonical SPDI:: NC_000007.14:154243:A:G
Gene:: LINC03014 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000007.14:g.154244A>G, NC_000007.13:g.154244A>G, NW_021159998.1:g.129932A>G, NT_187653.1:g.146565A>G, NT_187558.1:g.110049A>G, NR_108064.1:n.1358A>G, NR_108065.1:n.1251A>G

Select item 148819927213.

rs1488199272 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 7:147929 (GRCh38)
7:147929 (GRCh37)
Canonical SPDI:: NC_000007.14:147928:A:G
Gene:: LINC03014 (Varview), LINC03015 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000007.14:g.147929A>G, NC_000007.13:g.147929A>G, NW_021159998.1:g.123617A>G, NT_187653.1:g.140250A>G, NT_187558.1:g.103729A>G

Select item 148813494114.

rs1488134941 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 7:150509 (GRCh38)
7:150509 (GRCh37)
Canonical SPDI:: NC_000007.14:150508:C:T
Gene:: LINC03014 (Varview), LINC03015 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.150509C>T, NC_000007.13:g.150509C>T, NW_021159998.1:g.126197C>T, NT_187653.1:g.142830C>T, NT_187558.1:g.106314C>T

Select item 148808503915.

rs1488085039 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 7:149775 (GRCh38)
7:149775 (GRCh37)
Canonical SPDI:: NC_000007.14:149774:A:G,NC_000007.14:149774:A:T
Gene:: LINC03014 (Varview), LINC03015 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
T=0.000342/1 (KOREAN)
HGVS:: NC_000007.14:g.149775A>G, NC_000007.14:g.149775A>T, NC_000007.13:g.149775A>G, NC_000007.13:g.149775A>T, NW_021159998.1:g.125463A>G, NW_021159998.1:g.125463A>T, NT_187653.1:g.142096A>G, NT_187653.1:g.142096A>T, NT_187558.1:g.105580A>G, NT_187558.1:g.105580A>T, NR_108064.1:n.58A>G, NR_108064.1:n.58A>T, NR_108065.1:n.58A>G, NR_108065.1:n.58A>T

Select item 148792979816.

rs1487929798 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 7:152642 (GRCh38)
7:152642 (GRCh37)
Canonical SPDI:: NC_000007.14:152641:A:G
Gene:: LINC03014 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000007.14:g.152642A>G, NC_000007.13:g.152642A>G, NW_021159998.1:g.128330A>G, NT_187653.1:g.144963A>G, NT_187558.1:g.108447A>G

Select item 148658913317.

rs1486589133 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 7:155413 (GRCh38)
7:155413 (GRCh37)
Canonical SPDI:: NC_000007.14:155412:T:A
Gene:: LINC03014 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000007.14:g.155413T>A, NC_000007.13:g.155413T>A, NW_021159998.1:g.131101T>A, NT_187653.1:g.147734T>A, NT_187558.1:g.111218T>A, NR_108064.1:n.2527T>A, NR_108065.1:n.2420T>A

Select item 148561028718.

rs1485610287 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 7:154570 (GRCh38)
7:154570 (GRCh37)
Canonical SPDI:: NC_000007.14:154569:G:C
Gene:: LINC03014 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000108/2 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
C=0.000224/1 (Estonian)
HGVS:: NC_000007.14:g.154570G>C, NC_000007.13:g.154570G>C, NW_021159998.1:g.130258G>C, NT_187653.1:g.146891G>C, NT_187558.1:g.110375G>C, NR_108064.1:n.1684G>C, NR_108065.1:n.1577G>C

Select item 148486676119.

rs1484866761 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 7:148593 (GRCh38)
7:148593 (GRCh37)
Canonical SPDI:: NC_000007.14:148592:G:C
Gene:: LINC03014 (Varview), LINC03015 (Varview)
Functional Consequence:: non_coding_transcript_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000036/5 (GnomAD)
HGVS:: NC_000007.14:g.148593G>C, NC_000007.13:g.148593G>C, NW_021159998.1:g.124281G>C, NT_187653.1:g.140914G>C, NT_187558.1:g.104393G>C, NR_134325.1:n.136C>G

Select item 148476392320.

rs1484763923 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 7:148859 (GRCh38)
7:148859 (GRCh37)
Canonical SPDI:: NC_000007.14:148858:T:A,NC_000007.14:148858:T:C
Gene:: LINC03014 (Varview), LINC03015 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
C=0.000342/1 (KOREAN)
HGVS:: NC_000007.14:g.148859T>A, NC_000007.14:g.148859T>C, NC_000007.13:g.148859T>A, NC_000007.13:g.148859T>C, NW_021159998.1:g.124547T>A, NW_021159998.1:g.124547T>C, NT_187653.1:g.141180T>A, NT_187653.1:g.141180T>C, NT_187558.1:g.104659T>A, NT_187558.1:g.104659T>C

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