SNP Links for Gene (Select 101926959) - SNP

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Select item 14908854821.

rs1490885482 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:95667392 (GRCh38)
2:96333140 (GRCh37)
Canonical SPDI:: NC_000002.12:95667391:T:C
Gene:: LOC101926959 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.95667392T>C, NC_000002.11:g.96333140T>C, NW_025791760.1:g.429667T>C

Select item 14904529712.

rs1490452971 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:95664113 (GRCh38)
2:96329861 (GRCh37)
Canonical SPDI:: NC_000002.12:95664112:C:T
Gene:: LOC101926959 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000034/9 (TOPMED)
T=0.000057/8 (GnomAD)
HGVS:: NC_000002.12:g.95664113C>T, NC_000002.11:g.96329861C>T, NW_025791760.1:g.426388C>T

Select item 14897612383.

rs1489761238 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 2:95663895 (GRCh38)
2:96329643 (GRCh37)
Canonical SPDI:: NC_000002.12:95663894:G:A,NC_000002.12:95663894:G:C
Gene:: LOC101926959 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.95663895G>A, NC_000002.12:g.95663895G>C, NC_000002.11:g.96329643G>A, NC_000002.11:g.96329643G>C, NW_025791760.1:g.426170G>A, NW_025791760.1:g.426170G>C

Select item 14897514934.

rs1489751493 [Homo sapiens]

Variant type:: DELINS
Alleles:: CTT>- [Show Flanks]
Chromosome:: 2:95665128 (GRCh38)
2:96330876 (GRCh37)
Canonical SPDI:: NC_000002.12:95665125:TTCTT:TT
Gene:: LOC101926959 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TT=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000011/3 (TOPMED)
HGVS:: NC_000002.12:g.95665128_95665130del, NC_000002.11:g.96330876_96330878del, NW_025791760.1:g.427403_427405del

Select item 14887007355.

rs1488700735 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 2:95668281 (GRCh38)
2:96334029 (GRCh37)
Canonical SPDI:: NC_000002.12:95668280:A:T
Gene:: LOC101926959 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000023/6 (TOPMED)
HGVS:: NC_000002.12:g.95668281A>T, NC_000002.11:g.96334029A>T, NW_025791760.1:g.430556A>T, XR_923078.3:n.1240A>T, XR_923078.2:n.1185A>T, XR_923078.1:n.1139A>T, XR_007087142.1:n.1240A>T

Select item 14869244536.

rs1486924453 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 2:95666967 (GRCh38)
2:96332715 (GRCh37)
Canonical SPDI:: NC_000002.12:95666966:A:T
Gene:: LOC101926959 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.95666967A>T, NC_000002.11:g.96332715A>T, NW_025791760.1:g.429242A>T

Select item 14868724217.

rs1486872421 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:95664152 (GRCh38)
2:96329900 (GRCh37)
Canonical SPDI:: NC_000002.12:95664151:C:T
Gene:: LOC101926959 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.95664152C>T, NC_000002.11:g.96329900C>T, NW_025791760.1:g.426427C>T

Select item 14863411848.

rs1486341184 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:95663685 (GRCh38)
2:96329433 (GRCh37)
Canonical SPDI:: NC_000002.12:95663684:C:T
Gene:: LOC101926959 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.95663685C>T, NC_000002.11:g.96329433C>T, NW_025791760.1:g.425960C>T

Select item 14862595009.

rs1486259500 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 2:95667377 (GRCh38)
2:96333125 (GRCh37)
Canonical SPDI:: NC_000002.12:95667376:T:G
Gene:: LOC101926959 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
G=0.000015/4 (TOPMED)
HGVS:: NC_000002.12:g.95667377T>G, NC_000002.11:g.96333125T>G, NW_025791760.1:g.429652T>G

Select item 148579232910.

rs1485792329 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:95667252 (GRCh38)
2:96333000 (GRCh37)
Canonical SPDI:: NC_000002.12:95667251:T:C
Gene:: LOC101926959 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.95667252T>C, NC_000002.11:g.96333000T>C, NW_025791760.1:g.429527T>C

Select item 148562221711.

rs1485622217 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 2:95668270 (GRCh38)
2:96334018 (GRCh37)
Canonical SPDI:: NC_000002.12:95668269:G:T
Gene:: LOC101926959 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000071/1 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000023/6 (TOPMED)
HGVS:: NC_000002.12:g.95668270G>T, NC_000002.11:g.96334018G>T, NW_025791760.1:g.430545G>T, XR_923078.3:n.1229G>T, XR_923078.2:n.1174G>T, XR_923078.1:n.1128G>T, XR_007087142.1:n.1229G>T

Select item 148410002212.

rs1484100022 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:95669057 (GRCh38)
2:96334805 (GRCh37)
Canonical SPDI:: NC_000002.12:95669056:T:C
Gene:: LOC101926959 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: C=0.000224/1 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.95669057T>C, NC_000002.11:g.96334805T>C, NW_025791760.1:g.431332T>C

Select item 148306918713.

rs1483069187 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:95664644 (GRCh38)
2:96330392 (GRCh37)
Canonical SPDI:: NC_000002.12:95664643:G:A
Gene:: LOC101926959 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000019/5 (TOPMED)
A=0.000029/4 (GnomAD)
HGVS:: NC_000002.12:g.95664644G>A, NC_000002.11:g.96330392G>A, NW_025791760.1:g.426919G>A

Select item 148254425214.

rs1482544252 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:95666932 (GRCh38)
2:96332680 (GRCh37)
Canonical SPDI:: NC_000002.12:95666931:A:G
Gene:: LOC101926959 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.95666932A>G, NC_000002.11:g.96332680A>G, NW_025791760.1:g.429207A>G

Select item 148221429815.

rs1482214298 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:95666398 (GRCh38)
2:96332146 (GRCh37)
Canonical SPDI:: NC_000002.12:95666397:C:T
Gene:: LOC101926959 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000002.12:g.95666398C>T, NC_000002.11:g.96332146C>T, NW_025791760.1:g.428673C>T, XR_923078.3:n.849C>T, XR_923078.2:n.794C>T, XR_923078.1:n.748C>T, XR_007087142.1:n.849C>T

Select item 148170342616.

rs1481703426 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:95666361 (GRCh38)
2:96332109 (GRCh37)
Canonical SPDI:: NC_000002.12:95666360:T:C
Gene:: LOC101926959 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000015/4 (TOPMED)
HGVS:: NC_000002.12:g.95666361T>C, NC_000002.11:g.96332109T>C, NW_025791760.1:g.428636T>C, XR_923078.3:n.812T>C, XR_923078.2:n.757T>C, XR_923078.1:n.711T>C, XR_007087142.1:n.812T>C

Select item 148156091717.

rs1481560917 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 2:95667443 (GRCh38)
2:96333191 (GRCh37)
Canonical SPDI:: NC_000002.12:95667442:A:C
Gene:: LOC101926959 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.95667443A>C, NC_000002.11:g.96333191A>C, NW_025791760.1:g.429718A>C

Select item 148138769718.

rs1481387697 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:95667796 (GRCh38)
2:96333544 (GRCh37)
Canonical SPDI:: NC_000002.12:95667795:G:A
Gene:: LOC101926959 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.95667796G>A, NC_000002.11:g.96333544G>A, NW_025791760.1:g.430071G>A

Select item 148013976919.

rs1480139769 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 2:95666062 (GRCh38)
2:96331810 (GRCh37)
Canonical SPDI:: NC_000002.12:95666061:G:T
Gene:: LOC101926959 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency
MAF:: T=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.95666062G>T, NC_000002.11:g.96331810G>T, NW_025791760.1:g.428337G>T, XR_923078.3:n.513G>T, XR_923078.2:n.458G>T, XR_923078.1:n.412G>T, XR_007087142.1:n.513G>T

Select item 147921021820.

rs1479210218 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 2:95667837 (GRCh38)
2:96333585 (GRCh37)
Canonical SPDI:: NC_000002.12:95667836:G:C,NC_000002.12:95667836:G:T
Gene:: LOC101926959 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
C=0.000053/14 (TOPMED)
HGVS:: NC_000002.12:g.95667837G>C, NC_000002.12:g.95667837G>T, NC_000002.11:g.96333585G>C, NC_000002.11:g.96333585G>T, NW_025791760.1:g.430112G>C, NW_025791760.1:g.430112G>T

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