SNP Links for Gene (Select 101927186) - SNP

Links from Gene

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Select item 14914622461.

rs1491462246 has merged into rs34618531 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATATATATAT>-,AT,ATAT,ATATAT,ATATATAT,ATATATATATAT,ATATATATATATAT,ATATATATATATATAT,ATATATATATATATATAT,ATATATATATATATATATAT,ATATATATATATATATATATAT,ATATATATATATATATATATATAT,ATATATATATATATATATATATATAT,ATATATATATATATATATATATATATAT [Show Flanks]
Chromosome:: 4:62141932 (GRCh38)
4:63007650 (GRCh37)
Canonical SPDI:: NC_000004.12:62141921:ATATATATATATATATATAT:ATATATATAT,NC_000004.12:62141921:ATATATATATATATATATAT:ATATATATATAT,NC_000004.12:62141921:ATATATATATATATATATAT:ATATATATATATAT,NC_000004.12:62141921:ATATATATATATATATATAT:ATATATATATATATAT,NC_000004.12:62141921:ATATATATATATATATATAT:ATATATATATATATATAT,NC_000004.12:62141921:ATATATATATATATATATAT:ATATATATATATATATATATAT,NC_000004.12:62141921:ATATATATATATATATATAT:ATATATATATATATATATATATAT,NC_000004.12:62141921:ATATATATATATATATATAT:ATATATATATATATATATATATATAT,NC_000004.12:62141921:ATATATATATATATATATAT:ATATATATATATATATATATATATATAT,NC_000004.12:62141921:ATATATATATATATATATAT:ATATATATATATATATATATATATATATAT,NC_000004.12:62141921:ATATATATATATATATATAT:ATATATATATATATATATATATATATATATAT,NC_000004.12:62141921:ATATATATATATATATATAT:ATATATATATATATATATATATATATATATATAT,NC_000004.12:62141921:ATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATAT,NC_000004.12:62141921:ATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATAT
Gene:: LOC101927145 (Varview), ADGRL3-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATATATATATAT=0./0 (ALFA)
ATAT=0.4553/2280 (1000Genomes)
HGVS:: NC_000004.12:g.62141922AT[5], NC_000004.12:g.62141922AT[6], NC_000004.12:g.62141922AT[7], NC_000004.12:g.62141922AT[8], NC_000004.12:g.62141922AT[9], NC_000004.12:g.62141922AT[11], NC_000004.12:g.62141922AT[12], NC_000004.12:g.62141922AT[13], NC_000004.12:g.62141922AT[14], NC_000004.12:g.62141922AT[15], NC_000004.12:g.62141922AT[16], NC_000004.12:g.62141922AT[17], NC_000004.12:g.62141922AT[18], NC_000004.12:g.62141922AT[19], NC_000004.11:g.63007640AT[5], NC_000004.11:g.63007640AT[6], NC_000004.11:g.63007640AT[7], NC_000004.11:g.63007640AT[8], NC_000004.11:g.63007640AT[9], NC_000004.11:g.63007640AT[11], NC_000004.11:g.63007640AT[12], NC_000004.11:g.63007640AT[13], NC_000004.11:g.63007640AT[14], NC_000004.11:g.63007640AT[15], NC_000004.11:g.63007640AT[16], NC_000004.11:g.63007640AT[17], NC_000004.11:g.63007640AT[18], NC_000004.11:g.63007640AT[19]

Select item 14914332332.

rs1491433233 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->AAAAACCCAAAAAAAAAAAAA
Chromosome:: no mapping
Canonical SPDI:

Select item 14914206223.

rs1491420622 has merged into rs954289296 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAAA>-,AA,AAA,AAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 4:62096574 (GRCh38)
4:62962292 (GRCh37)
Canonical SPDI:: NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62096565:AAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: ADGRL3-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAA=0./0 (ALFA)
HGVS:: NC_000004.12:g.62096574_62096587del, NC_000004.12:g.62096576_62096587del, NC_000004.12:g.62096577_62096587del, NC_000004.12:g.62096578_62096587del, NC_000004.12:g.62096580_62096587del, NC_000004.12:g.62096581_62096587del, NC_000004.12:g.62096582_62096587del, NC_000004.12:g.62096583_62096587del, NC_000004.12:g.62096584_62096587del, NC_000004.12:g.62096585_62096587del, NC_000004.12:g.62096586_62096587del, NC_000004.12:g.62096587del, NC_000004.12:g.62096587dup, NC_000004.12:g.62096586_62096587dup, NC_000004.12:g.62096585_62096587dup, NC_000004.12:g.62096584_62096587dup, NC_000004.12:g.62096583_62096587dup, NC_000004.12:g.62096582_62096587dup, NC_000004.12:g.62096581_62096587dup, NC_000004.12:g.62096580_62096587dup, NC_000004.12:g.62096579_62096587dup, NC_000004.12:g.62096578_62096587dup, NC_000004.12:g.62096576_62096587dup, NC_000004.12:g.62096575_62096587dup, NC_000004.12:g.62096574_62096587dup, NC_000004.12:g.62096573_62096587dup, NC_000004.12:g.62096572_62096587dup, NC_000004.12:g.62096571_62096587dup, NC_000004.12:g.62096570_62096587dup, NC_000004.12:g.62096569_62096587dup, NC_000004.12:g.62096566_62096587dup, NC_000004.11:g.62962292_62962305del, NC_000004.11:g.62962294_62962305del, NC_000004.11:g.62962295_62962305del, NC_000004.11:g.62962296_62962305del, NC_000004.11:g.62962298_62962305del, NC_000004.11:g.62962299_62962305del, NC_000004.11:g.62962300_62962305del, NC_000004.11:g.62962301_62962305del, NC_000004.11:g.62962302_62962305del, NC_000004.11:g.62962303_62962305del, NC_000004.11:g.62962304_62962305del, NC_000004.11:g.62962305del, NC_000004.11:g.62962305dup, NC_000004.11:g.62962304_62962305dup, NC_000004.11:g.62962303_62962305dup, NC_000004.11:g.62962302_62962305dup, NC_000004.11:g.62962301_62962305dup, NC_000004.11:g.62962300_62962305dup, NC_000004.11:g.62962299_62962305dup, NC_000004.11:g.62962298_62962305dup, NC_000004.11:g.62962297_62962305dup, NC_000004.11:g.62962296_62962305dup, NC_000004.11:g.62962294_62962305dup, NC_000004.11:g.62962293_62962305dup, NC_000004.11:g.62962292_62962305dup, NC_000004.11:g.62962291_62962305dup, NC_000004.11:g.62962290_62962305dup, NC_000004.11:g.62962289_62962305dup, NC_000004.11:g.62962288_62962305dup, NC_000004.11:g.62962287_62962305dup, NC_000004.11:g.62962284_62962305dup

Select item 14913246754.

rs1491324675 [Homo sapiens]

Variant type:: DEL
Alleles:: TC>- [Show Flanks]
Chromosome:: 4:62140651 (GRCh38)
4:63006369 (GRCh37)
Canonical SPDI:: NC_000004.12:62140650:TC:
Gene:: LOC101927145 (Varview), ADGRL3-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: -=0.00211/45 (GnomAD)
HGVS:: NC_000004.12:g.62140651_62140652del, NC_000004.11:g.63006369_63006370del

Select item 14912921115.

rs1491292111 has merged into rs3048332 [Homo sapiens]

Variant type:: DELINS
Alleles:: AA>-,A,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 4:62140665 (GRCh38)
4:63006383 (GRCh37)
Canonical SPDI:: NC_000004.12:62140652:AAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000004.12:62140652:AAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000004.12:62140652:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000004.12:62140652:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000004.12:62140652:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000004.12:62140652:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000004.12:62140652:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000004.12:62140652:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62140652:AAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: LOC101927145 (Varview), ADGRL3-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAA=0./0 (ALFA)
-=0.2827/1416 (1000Genomes)
HGVS:: NC_000004.12:g.62140665_62140666del, NC_000004.12:g.62140666del, NC_000004.12:g.62140666dup, NC_000004.12:g.62140665_62140666dup, NC_000004.12:g.62140664_62140666dup, NC_000004.12:g.62140663_62140666dup, NC_000004.12:g.62140662_62140666dup, NC_000004.12:g.62140654_62140666dup, NC_000004.12:g.62140666_62140667insAAAAAAAAAAAAAAA, NC_000004.11:g.63006383_63006384del, NC_000004.11:g.63006384del, NC_000004.11:g.63006384dup, NC_000004.11:g.63006383_63006384dup, NC_000004.11:g.63006382_63006384dup, NC_000004.11:g.63006381_63006384dup, NC_000004.11:g.63006380_63006384dup, NC_000004.11:g.63006372_63006384dup, NC_000004.11:g.63006384_63006385insAAAAAAAAAAAAAAA

Select item 14912860416.

rs1491286041 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GTATAT [Show Flanks]
Chromosome:: 4:62141922 (GRCh38)
4:63007641 (GRCh37)
Canonical SPDI:: NC_000004.12:62141922:TATAT:TATATGTATAT
Gene:: LOC101927145 (Varview), ADGRL3-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TATATGTATAT=0./0 (ALFA)
TATATG=0.00037/7 (GnomAD)
HGVS:: NC_000004.12:g.62141923_62141927TA[2]TGTATAT[1], NC_000004.11:g.63007641_63007645TA[2]TGTATAT[1]

Select item 14912852527.

rs1491285252 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->ACAC [Show Flanks]
Chromosome:: 4:62086410 (GRCh38)
4:62952129 (GRCh37)
Canonical SPDI:: NC_000004.12:62086410:ACACAC:ACACACACAC
Gene:: ADGRL3-AS1 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000004.12:g.62086411AC[5], NC_000004.11:g.62952129AC[5]

Select item 14912654628.

rs1491265462 [Homo sapiens]

Variant type:: DEL
Alleles:: GT>- [Show Flanks]
Chromosome:: 4:62143294 (GRCh38)
4:63009012 (GRCh37)
Canonical SPDI:: NC_000004.12:62143293:GT:
Gene:: LOC101927145 (Varview), ADGRL3-AS1 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.000084/1 (ALFA)
-=0.000106/2 (TOMMO)
-=0.000112/13 (GnomAD)
HGVS:: NC_000004.12:g.62143294_62143295del, NC_000004.11:g.63009012_63009013del, XR_001741397.2:n.677_678del, XR_001741397.1:n.687_688del

Select item 14912646669.

rs1491264666 has merged into rs34795556 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAAAAAAA>-,A,AAAA,AAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 4:62082683 (GRCh38)
4:62948401 (GRCh37)
Canonical SPDI:: NC_000004.12:62082671:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000004.12:62082671:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000004.12:62082671:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000004.12:62082671:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000004.12:62082671:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000004.12:62082671:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000004.12:62082671:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000004.12:62082671:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62082671:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62082671:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62082671:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62082671:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62082671:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62082671:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:62082671:AAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: ADGRL3-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAA=0./0 (ALFA)
AAAAAAAAAAAAAAAA=0./0 (GENOME_DK)
-=0.1674/645 (ALSPAC)
-=0.4603/2305 (1000Genomes)
HGVS:: NC_000004.12:g.62082683_62082698del, NC_000004.12:g.62082684_62082698del, NC_000004.12:g.62082687_62082698del, NC_000004.12:g.62082688_62082698del, NC_000004.12:g.62082690_62082698del, NC_000004.12:g.62082691_62082698del, NC_000004.12:g.62082692_62082698del, NC_000004.12:g.62082694_62082698del, NC_000004.12:g.62082695_62082698del, NC_000004.12:g.62082696_62082698del, NC_000004.12:g.62082697_62082698del, NC_000004.12:g.62082698del, NC_000004.12:g.62082698dup, NC_000004.12:g.62082697_62082698dup, NC_000004.12:g.62082696_62082698dup, NC_000004.11:g.62948401_62948416del, NC_000004.11:g.62948402_62948416del, NC_000004.11:g.62948405_62948416del, NC_000004.11:g.62948406_62948416del, NC_000004.11:g.62948408_62948416del, NC_000004.11:g.62948409_62948416del, NC_000004.11:g.62948410_62948416del, NC_000004.11:g.62948412_62948416del, NC_000004.11:g.62948413_62948416del, NC_000004.11:g.62948414_62948416del, NC_000004.11:g.62948415_62948416del, NC_000004.11:g.62948416del, NC_000004.11:g.62948416dup, NC_000004.11:g.62948415_62948416dup, NC_000004.11:g.62948414_62948416dup

Select item 149124779810.

rs1491247798 has merged into rs71213035 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTTTTTTTTT>-,TTT,TTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 4:62143304 (GRCh38)
4:63009022 (GRCh37)
Canonical SPDI:: NC_000004.12:62143294:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000004.12:62143294:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000004.12:62143294:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000004.12:62143294:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000004.12:62143294:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000004.12:62143294:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000004.12:62143294:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000004.12:62143294:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000004.12:62143294:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000004.12:62143294:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000004.12:62143294:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:62143294:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:62143294:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:62143294:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:62143294:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:62143294:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:62143294:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:62143294:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:62143294:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: LOC101927145 (Varview), ADGRL3-AS1 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,non_coding_transcript_variant,intron_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTT=0./0 (ALFA)
-=0.02/12 (NorthernSweden)
-=0.395/15 (GENOME_DK)
HGVS:: NC_000004.12:g.62143304_62143320del, NC_000004.12:g.62143307_62143320del, NC_000004.12:g.62143308_62143320del, NC_000004.12:g.62143310_62143320del, NC_000004.12:g.62143311_62143320del, NC_000004.12:g.62143312_62143320del, NC_000004.12:g.62143313_62143320del, NC_000004.12:g.62143314_62143320del, NC_000004.12:g.62143315_62143320del, NC_000004.12:g.62143316_62143320del, NC_000004.12:g.62143317_62143320del, NC_000004.12:g.62143318_62143320del, NC_000004.12:g.62143319_62143320del, NC_000004.12:g.62143320del, NC_000004.12:g.62143320dup, NC_000004.12:g.62143319_62143320dup, NC_000004.12:g.62143318_62143320dup, NC_000004.12:g.62143317_62143320dup, NC_000004.12:g.62143316_62143320dup, NC_000004.11:g.63009022_63009038del, NC_000004.11:g.63009025_63009038del, NC_000004.11:g.63009026_63009038del, NC_000004.11:g.63009028_63009038del, NC_000004.11:g.63009029_63009038del, NC_000004.11:g.63009030_63009038del, NC_000004.11:g.63009031_63009038del, NC_000004.11:g.63009032_63009038del, NC_000004.11:g.63009033_63009038del, NC_000004.11:g.63009034_63009038del, NC_000004.11:g.63009035_63009038del, NC_000004.11:g.63009036_63009038del, NC_000004.11:g.63009037_63009038del, NC_000004.11:g.63009038del, NC_000004.11:g.63009038dup, NC_000004.11:g.63009037_63009038dup, NC_000004.11:g.63009036_63009038dup, NC_000004.11:g.63009035_63009038dup, NC_000004.11:g.63009034_63009038dup

Select item 149123359611.

rs1491233596 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: 4:62161298 (GRCh38)
4:63027016 (GRCh37)
Canonical SPDI:: NC_000004.12:62161297:CA:
Gene:: LOC101927145 (Varview), ADGRL3-AS1 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000004.12:g.62161298_62161299del, NC_000004.11:g.63027016_63027017del

Select item 149120414212.

rs1491204142 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->C [Show Flanks]
Chromosome:: 4:62140651 (GRCh38)
4:63006370 (GRCh37)
Canonical SPDI:: NC_000004.12:62140651:C:CC
Gene:: LOC101927145 (Varview), ADGRL3-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: CC=0./0 (ALFA)
HGVS:: NC_000004.12:g.62140652dup, NC_000004.11:g.63006370dup

Select item 149117305213.

rs1491173052 [Homo sapiens]

Variant type:: DEL
Alleles:: TA>- [Show Flanks]
Chromosome:: 4:62082671 (GRCh38)
4:62948389 (GRCh37)
Canonical SPDI:: NC_000004.12:62082670:TA:
Gene:: ADGRL3-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00008/1 (ALFA)
HGVS:: NC_000004.12:g.62082671_62082672del, NC_000004.11:g.62948389_62948390del

Select item 149113305914.

rs1491133059 [Homo sapiens]

Variant type:: INS
Alleles:: ->C [Show Flanks]
Chromosome:: 4:62096566 (GRCh38)
4:62962285 (GRCh37)
Canonical SPDI:: NC_000004.12:62096566::C
Gene:: ADGRL3-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000004.12:g.62096566_62096567insC, NC_000004.11:g.62962284_62962285insC

Select item 149107148215.

rs1491071482 has merged into rs1553928942 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATAT>-,AT,ATATAT,ATATATAT,ATATATATAT,ATATATATATAT,ATATATATATATAT [Show Flanks]
Chromosome:: 4:62142065 (GRCh38)
4:63007783 (GRCh37)
Canonical SPDI:: NC_000004.12:62142059:TATATATAT:TATAT,NC_000004.12:62142059:TATATATAT:TATATAT,NC_000004.12:62142059:TATATATAT:TATATATATAT,NC_000004.12:62142059:TATATATAT:TATATATATATAT,NC_000004.12:62142059:TATATATAT:TATATATATATATAT,NC_000004.12:62142059:TATATATAT:TATATATATATATATAT,NC_000004.12:62142059:TATATATAT:TATATATATATATATATAT
Gene:: LOC101927145 (Varview), ADGRL3-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TATATATATAT=0./0 (ALFA)
-=0.00676/4 (NorthernSweden)
TA=0.00789/132 (TOMMO)
TA=0.01429/26 (Korea1K)
HGVS:: NC_000004.12:g.62142061AT[2], NC_000004.12:g.62142061AT[3], NC_000004.12:g.62142061AT[5], NC_000004.12:g.62142061AT[6], NC_000004.12:g.62142061AT[7], NC_000004.12:g.62142061AT[8], NC_000004.12:g.62142061AT[9], NC_000004.11:g.63007779AT[2], NC_000004.11:g.63007779AT[3], NC_000004.11:g.63007779AT[5], NC_000004.11:g.63007779AT[6], NC_000004.11:g.63007779AT[7], NC_000004.11:g.63007779AT[8], NC_000004.11:g.63007779AT[9]

Select item 149105976916.

rs1491059769 [Homo sapiens]

Variant type:: DEL
Alleles:: TT>- [Show Flanks]
Chromosome:: 4:62158914 (GRCh38)
4:63024632 (GRCh37)
Canonical SPDI:: NC_000004.12:62158913:TT:
Gene:: LOC101927145 (Varview), ADGRL3-AS1 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000015/2 (GnomAD)
HGVS:: NC_000004.12:g.62158914_62158915del, NC_000004.11:g.63024632_63024633del

Select item 149104264117.

rs1491042641 [Homo sapiens]

Variant type:: INS
Alleles:: ->G,GTATACTC [Show Flanks]
Chromosome:: 4:62106585 (GRCh38)
4:62972304 (GRCh37)
Canonical SPDI:: NC_000004.12:62106585::G,NC_000004.12:62106585::GTATACTC
Gene:: ADGRL3-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: GTATACTC=0./0 (ALFA)
HGVS:: NC_000004.12:g.62106585_62106586insG, NC_000004.12:g.62106585_62106586insGTATACTC, NC_000004.11:g.62972303_62972304insG, NC_000004.11:g.62972303_62972304insGTATACTC

Select item 149101707618.

rs1491017076 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AA [Show Flanks]
Chromosome:: 4:62155369 (GRCh38)
4:63021088 (GRCh37)
Canonical SPDI:: NC_000004.12:62155369:AA:AAAA
Gene:: LOC101927145 (Varview), ADGRL3-AS1 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAA=0.000061/1 (ALFA)
AA=0.000004/1 (TOPMED)
AA=0.000008/1 (GnomAD)
HGVS:: NC_000004.12:g.62155370_62155371dup, NC_000004.11:g.63021088_63021089dup

Select item 149101443419.

rs1491014434 [Homo sapiens]

Variant type:: DELINS
Alleles:: GA>- [Show Flanks]
Chromosome:: 4:62104327 (GRCh38)
4:62970045 (GRCh37)
Canonical SPDI:: NC_000004.12:62104325:AGA:A
Gene:: ADGRL3-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.132374/1997 (ALFA)
-=0.051313/859 (TOMMO)
-=0.285007/36836 (GnomAD)
HGVS:: NC_000004.12:g.62104327_62104328del, NC_000004.11:g.62970045_62970046del

Select item 149100722020.

rs1491007220 has merged into rs112701472 [Homo sapiens]

Variant type:: DELINS
Alleles:: CACACA>-,CA,CACA,CACACACA,CACACACACA,CACACACACACA [Show Flanks]
Chromosome:: 4:62104321 (GRCh38)
4:62970039 (GRCh37)
Canonical SPDI:: NC_000004.12:62104309:ACACACACACACACACA:ACACACACACA,NC_000004.12:62104309:ACACACACACACACACA:ACACACACACACA,NC_000004.12:62104309:ACACACACACACACACA:ACACACACACACACA,NC_000004.12:62104309:ACACACACACACACACA:ACACACACACACACACACA,NC_000004.12:62104309:ACACACACACACACACA:ACACACACACACACACACACA,NC_000004.12:62104309:ACACACACACACACACA:ACACACACACACACACACACACA
Gene:: ADGRL3-AS1 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ACACACACACACA=0./0 (ALFA)
-=0.000004/1 (TOPMED)
AC=0.219643/984 (Estonian)
AC=0.225/9 (GENOME_DK)
AC=0.24/144 (NorthernSweden)
AC=0.253552/464 (Korea1K)
-=0.363727/363 (GoNL)
-=0.445887/2233 (1000Genomes)
HGVS:: NC_000004.12:g.62104311CA[5], NC_000004.12:g.62104311CA[6], NC_000004.12:g.62104311CA[7], NC_000004.12:g.62104311CA[9], NC_000004.12:g.62104311CA[10], NC_000004.12:g.62104311CA[11], NC_000004.11:g.62970029CA[5], NC_000004.11:g.62970029CA[6], NC_000004.11:g.62970029CA[7], NC_000004.11:g.62970029CA[9], NC_000004.11:g.62970029CA[10], NC_000004.11:g.62970029CA[11]

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