SNP Links for Gene (Select 101927490) - SNP

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Select item 14915141951.

rs1491514195 has merged into rs781136385 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTTTT>-,TT,TTT,TTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 4:139642305 (GRCh38)
4:140563459 (GRCh37)
Canonical SPDI:: NC_000004.12:139642295:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000004.12:139642295:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000004.12:139642295:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000004.12:139642295:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000004.12:139642295:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000004.12:139642295:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000004.12:139642295:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000004.12:139642295:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000004.12:139642295:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000004.12:139642295:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000004.12:139642295:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:139642295:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:139642295:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:139642295:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:139642295:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:139642295:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:139642295:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:139642295:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:139642295:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:139642295:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:139642295:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:139642295:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:139642295:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: QKILA (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTT=0./0 (ALFA)
HGVS:: NC_000004.12:g.139642305_139642316del, NC_000004.12:g.139642307_139642316del, NC_000004.12:g.139642308_139642316del, NC_000004.12:g.139642309_139642316del, NC_000004.12:g.139642311_139642316del, NC_000004.12:g.139642312_139642316del, NC_000004.12:g.139642313_139642316del, NC_000004.12:g.139642314_139642316del, NC_000004.12:g.139642315_139642316del, NC_000004.12:g.139642316del, NC_000004.12:g.139642316dup, NC_000004.12:g.139642315_139642316dup, NC_000004.12:g.139642314_139642316dup, NC_000004.12:g.139642313_139642316dup, NC_000004.12:g.139642312_139642316dup, NC_000004.12:g.139642311_139642316dup, NC_000004.12:g.139642310_139642316dup, NC_000004.12:g.139642309_139642316dup, NC_000004.12:g.139642308_139642316dup, NC_000004.12:g.139642307_139642316dup, NC_000004.12:g.139642304_139642316dup, NC_000004.12:g.139642301_139642316dup, NC_000004.12:g.139642296_139642316dup, NC_000004.11:g.140563459_140563470del, NC_000004.11:g.140563461_140563470del, NC_000004.11:g.140563462_140563470del, NC_000004.11:g.140563463_140563470del, NC_000004.11:g.140563465_140563470del, NC_000004.11:g.140563466_140563470del, NC_000004.11:g.140563467_140563470del, NC_000004.11:g.140563468_140563470del, NC_000004.11:g.140563469_140563470del, NC_000004.11:g.140563470del, NC_000004.11:g.140563470dup, NC_000004.11:g.140563469_140563470dup, NC_000004.11:g.140563468_140563470dup, NC_000004.11:g.140563467_140563470dup, NC_000004.11:g.140563466_140563470dup, NC_000004.11:g.140563465_140563470dup, NC_000004.11:g.140563464_140563470dup, NC_000004.11:g.140563463_140563470dup, NC_000004.11:g.140563462_140563470dup, NC_000004.11:g.140563461_140563470dup, NC_000004.11:g.140563458_140563470dup, NC_000004.11:g.140563455_140563470dup, NC_000004.11:g.140563450_140563470dup

Select item 14914640782.

rs1491464078 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AT [Show Flanks]
Chromosome:: 4:139621776 (GRCh38)
4:140542931 (GRCh37)
Canonical SPDI:: NC_000004.12:139621776:T:TAT
Gene:: QKILA (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TAT=0.00008/1 (ALFA)
HGVS:: NC_000004.12:g.139621777_139621778insAT, NC_000004.11:g.140542931_140542932insAT

Select item 14914132733.

rs1491413273 has merged into rs869222727 [Homo sapiens]

Variant type:: DELINS
Alleles:: AA>-,AAAA [Show Flanks]
Chromosome:: 4:139619529 (GRCh38)
4:140540683 (GRCh37)
Canonical SPDI:: NC_000004.12:139619527:AAA:A,NC_000004.12:139619527:AAA:AAAAA
Gene:: QKILA (Varview)
Functional Consequence:: intron_variant
Validated:: by cluster
HGVS:: NC_000004.12:g.139619529_139619530del, NC_000004.12:g.139619529_139619530dup, NC_000004.11:g.140540683_140540684del, NC_000004.11:g.140540683_140540684dup

Select item 14914077864.

rs1491407786 [Homo sapiens]

Variant type:: SNV:
Alleles:: GA>-
Chromosome:: no mapping
Canonical SPDI:

Select item 14914050475.

rs1491405047 has merged into rs70943433 [Homo sapiens]

Variant type:: DELINS
Alleles:: AATAATAATAATAAT>-,AAT,AATAAT,AATAATAAT,AATAATAATAAT,AATAATAATAATAATAAT,AATAATAATAATAATAATAAT [Show Flanks]
Chromosome:: 4:139619544 (GRCh38)
4:140540698 (GRCh37)
Canonical SPDI:: NC_000004.12:139619528:AATAATAATAATAATAATAATAATAATAAT:AATAATAATAATAAT,NC_000004.12:139619528:AATAATAATAATAATAATAATAATAATAAT:AATAATAATAATAATAAT,NC_000004.12:139619528:AATAATAATAATAATAATAATAATAATAAT:AATAATAATAATAATAATAAT,NC_000004.12:139619528:AATAATAATAATAATAATAATAATAATAAT:AATAATAATAATAATAATAATAAT,NC_000004.12:139619528:AATAATAATAATAATAATAATAATAATAAT:AATAATAATAATAATAATAATAATAAT,NC_000004.12:139619528:AATAATAATAATAATAATAATAATAATAAT:AATAATAATAATAATAATAATAATAATAATAAT,NC_000004.12:139619528:AATAATAATAATAATAATAATAATAATAAT:AATAATAATAATAATAATAATAATAATAATAATAAT
Gene:: QKILA (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AATAATAATAATAATAAT=0./0 (ALFA)
HGVS:: NC_000004.12:g.139619529AAT[5], NC_000004.12:g.139619529AAT[6], NC_000004.12:g.139619529AAT[7], NC_000004.12:g.139619529AAT[8], NC_000004.12:g.139619529AAT[9], NC_000004.12:g.139619529AAT[11], NC_000004.12:g.139619529AAT[12], NC_000004.11:g.140540683AAT[5], NC_000004.11:g.140540683AAT[6], NC_000004.11:g.140540683AAT[7], NC_000004.11:g.140540683AAT[8], NC_000004.11:g.140540683AAT[9], NC_000004.11:g.140540683AAT[11], NC_000004.11:g.140540683AAT[12]

Select item 14911086716.

rs1491108671 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>- [Show Flanks]
Chromosome:: 4:139621778 (GRCh38)
4:140542932 (GRCh37)
Canonical SPDI:: NC_000004.12:139621775:TTTT:TT
Gene:: QKILA (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTT=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000019/5 (TOPMED)
HGVS:: NC_000004.12:g.139621778_139621779del, NC_000004.11:g.140542932_140542933del

Select item 14910797297.

rs1491079729 has merged into rs150061523 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAAAAAAA>-,A,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: 4:139641947 (GRCh38)
4:140563101 (GRCh37)
Canonical SPDI:: NC_000004.12:139641938:AAAAAAAAAAAAAAAAAAA:AAAAAAAA,NC_000004.12:139641938:AAAAAAAAAAAAAAAAAAA:AAAAAAAAA,NC_000004.12:139641938:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000004.12:139641938:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000004.12:139641938:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000004.12:139641938:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000004.12:139641938:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000004.12:139641938:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000004.12:139641938:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000004.12:139641938:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000004.12:139641938:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:139641938:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:139641938:AAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA
Gene:: QKILA (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAA=0./0 (ALFA)
-=0.3502/1754 (1000Genomes)
HGVS:: NC_000004.12:g.139641947_139641957del, NC_000004.12:g.139641948_139641957del, NC_000004.12:g.139641952_139641957del, NC_000004.12:g.139641953_139641957del, NC_000004.12:g.139641954_139641957del, NC_000004.12:g.139641955_139641957del, NC_000004.12:g.139641956_139641957del, NC_000004.12:g.139641957del, NC_000004.12:g.139641957dup, NC_000004.12:g.139641956_139641957dup, NC_000004.12:g.139641955_139641957dup, NC_000004.12:g.139641954_139641957dup, NC_000004.12:g.139641953_139641957dup, NC_000004.11:g.140563101_140563111del, NC_000004.11:g.140563102_140563111del, NC_000004.11:g.140563106_140563111del, NC_000004.11:g.140563107_140563111del, NC_000004.11:g.140563108_140563111del, NC_000004.11:g.140563109_140563111del, NC_000004.11:g.140563110_140563111del, NC_000004.11:g.140563111del, NC_000004.11:g.140563111dup, NC_000004.11:g.140563110_140563111dup, NC_000004.11:g.140563109_140563111dup, NC_000004.11:g.140563108_140563111dup, NC_000004.11:g.140563107_140563111dup

Select item 14907481168.

rs1490748116 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:139640430 (GRCh38)
4:140561584 (GRCh37)
Canonical SPDI:: NC_000004.12:139640429:A:G
Gene:: QKILA (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000066/1 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000223/1 (Estonian)
HGVS:: NC_000004.12:g.139640430A>G, NC_000004.11:g.140561584A>G

Select item 14907200069.

rs1490720006 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 4:139635994 (GRCh38)
4:140557148 (GRCh37)
Canonical SPDI:: NC_000004.12:139635993:A:G,NC_000004.12:139635993:A:T
Gene:: QKILA (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
G=0.000035/1 (TOMMO)
HGVS:: NC_000004.12:g.139635994A>G, NC_000004.12:g.139635994A>T, NC_000004.11:g.140557148A>G, NC_000004.11:g.140557148A>T

Select item 149069722110.

rs1490697221 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:139621557 (GRCh38)
4:140542711 (GRCh37)
Canonical SPDI:: NC_000004.12:139621556:A:G
Gene:: QKILA (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.139621557A>G, NC_000004.11:g.140542711A>G

Select item 149058469011.

rs1490584690 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 4:139641282 (GRCh38)
4:140562436 (GRCh37)
Canonical SPDI:: NC_000004.12:139641281:T:G
Gene:: QKILA (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000004.12:g.139641282T>G, NC_000004.11:g.140562436T>G

Select item 149049113212.

rs1490491132 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->TTTTT [Show Flanks]
Chromosome:: 4:139627493 (GRCh38)
4:140548648 (GRCh37)
Canonical SPDI:: NC_000004.12:139627493:T:TTTTTT
Gene:: QKILA (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TTTTTT=0.0004/2 (ALFA)
TTTTT=0.0004/2 (Estonian)
HGVS:: NC_000004.12:g.139627494_139627495insTTTTT, NC_000004.11:g.140548648_140548649insTTTTT

Select item 149046618613.

rs1490466186 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:139628090 (GRCh38)
4:140549244 (GRCh37)
Canonical SPDI:: NC_000004.12:139628089:A:G
Gene:: QKILA (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000004.12:g.139628090A>G, NC_000004.11:g.140549244A>G

Select item 149015837314.

rs1490158373 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 4:139629981 (GRCh38)
4:140551135 (GRCh37)
Canonical SPDI:: NC_000004.12:139629980:C:A
Gene:: QKILA (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.139629981C>A, NC_000004.11:g.140551135C>A

Select item 149005316315.

rs1490053163 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:139626482 (GRCh38)
4:140547636 (GRCh37)
Canonical SPDI:: NC_000004.12:139626481:A:G
Gene:: QKILA (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.139626482A>G, NC_000004.11:g.140547636A>G

Select item 148990825216.

rs1489908252 [Homo sapiens]

Variant type:: INS
Alleles:: ->CC [Show Flanks]
Chromosome:: 4:139623151 (GRCh38)
4:140544306 (GRCh37)
Canonical SPDI:: NC_000004.12:139623151::CC
Gene:: QKILA (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: CC=0./0 (ALFA)
CC=0.000043/6 (GnomAD)
HGVS:: NC_000004.12:g.139623151_139623152insCC, NC_000004.11:g.140544305_140544306insCC

Select item 148988321617.

rs1489883216 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:139621972 (GRCh38)
4:140543126 (GRCh37)
Canonical SPDI:: NC_000004.12:139621971:C:T
Gene:: QKILA (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000019/5 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000004.12:g.139621972C>T, NC_000004.11:g.140543126C>T

Select item 148972074118.

rs1489720741 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:139642160 (GRCh38)
4:140563314 (GRCh37)
Canonical SPDI:: NC_000004.12:139642159:C:T
Gene:: QKILA (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000029/4 (GnomAD)
HGVS:: NC_000004.12:g.139642160C>T, NC_000004.11:g.140563314C>T

Select item 148961878919.

rs1489618789 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:139644037 (GRCh38)
4:140565191 (GRCh37)
Canonical SPDI:: NC_000004.12:139644036:A:G
Gene:: QKILA (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by cluster
MAF:: G=0.0027/5 (Korea1K)
HGVS:: NC_000004.12:g.139644037A>G, NC_000004.11:g.140565191A>G

Select item 148924476920.

rs1489244769 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 4:139642144 (GRCh38)
4:140563298 (GRCh37)
Canonical SPDI:: NC_000004.12:139642143:G:A,NC_000004.12:139642143:G:T
Gene:: QKILA (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
HGVS:: NC_000004.12:g.139642144G>A, NC_000004.12:g.139642144G>T, NC_000004.11:g.140563298G>A, NC_000004.11:g.140563298G>T

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