SNP Links for Gene (Select 101927494) - SNP

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Select item 14915556911.

rs1491555691 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->CA
Chromosome:: no mapping
Canonical SPDI:

Select item 14913117842.

rs1491311784 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AACAAA [Show Flanks]
Chromosome:: 3:86493785 (GRCh38)
3:86542936 (GRCh37)
Canonical SPDI:: NC_000003.12:86493785:CAAA:CAAAAACAAA
Gene:: LINC02070 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CAAAAACAAA=0./0 (ALFA)
CAAAAA=0.000064/9 (GnomAD)
CAAAAA=0.000091/24 (TOPMED)
HGVS:: NC_000003.12:g.86493789_86493790insAACAAA, NC_000003.11:g.86542939_86542940insAACAAA

Select item 14911950063.

rs1491195006 [Homo sapiens]

Variant type:: DELINS
Alleles:: AT>- [Show Flanks]
Chromosome:: 3:86495257 (GRCh38)
3:86544407 (GRCh37)
Canonical SPDI:: NC_000003.12:86495255:TAT:T
Gene:: LINC02070 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
-=0.00075/13 (TOMMO)
-=0.00144/106 (GnomAD)
HGVS:: NC_000003.12:g.86495257_86495258del, NC_000003.11:g.86544407_86544408del

Select item 14910932524.

rs1491093252 [Homo sapiens]

Variant type:: DEL
Alleles:: CT>- [Show Flanks]
Chromosome:: 3:86482656 (GRCh38)
3:86531806 (GRCh37)
Canonical SPDI:: NC_000003.12:86482655:CT:
Gene:: LINC02070 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000003.12:g.86482656_86482657del, NC_000003.11:g.86531806_86531807del

Select item 14910009625.

rs1491000962 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:86485994 (GRCh38)
3:86535144 (GRCh37)
Canonical SPDI:: NC_000003.12:86485993:A:G
Gene:: LINC02070 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000003.12:g.86485994A>G, NC_000003.11:g.86535144A>G

Select item 14907255216.

rs1490725521 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:86486819 (GRCh38)
3:86535969 (GRCh37)
Canonical SPDI:: NC_000003.12:86486818:C:T
Gene:: LINC02070 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000015/4 (TOPMED)
T=0.000021/3 (GnomAD)
HGVS:: NC_000003.12:g.86486819C>T, NC_000003.11:g.86535969C>T

Select item 14905628947.

rs1490562894 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 3:86486442 (GRCh38)
3:86535592 (GRCh37)
Canonical SPDI:: NC_000003.12:86486441:T:G
Gene:: LINC02070 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.86486442T>G, NC_000003.11:g.86535592T>G

Select item 14904882298.

rs1490488229 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:86493864 (GRCh38)
3:86543014 (GRCh37)
Canonical SPDI:: NC_000003.12:86493863:T:C
Gene:: LINC02070 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000003.12:g.86493864T>C, NC_000003.11:g.86543014T>C

Select item 14903479579.

rs1490347957 [Homo sapiens]

Variant type:: DELINS
Alleles:: T>- [Show Flanks]
Chromosome:: 3:86485103 (GRCh38)
3:86534253 (GRCh37)
Canonical SPDI:: NC_000003.12:86485102:TTTTTT:TTTTT
Gene:: LINC02070 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTT=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000008/2 (TOPMED)
HGVS:: NC_000003.12:g.86485108del, NC_000003.11:g.86534258del

Select item 149029053310.

rs1490290533 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 3:86492270 (GRCh38)
3:86541420 (GRCh37)
Canonical SPDI:: NC_000003.12:86492269:G:C
Gene:: LINC02070 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000003.12:g.86492270G>C, NC_000003.11:g.86541420G>C

Select item 149027708111.

rs1490277081 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:86491297 (GRCh38)
3:86540447 (GRCh37)
Canonical SPDI:: NC_000003.12:86491296:T:C
Gene:: LINC02070 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
C=0.000034/9 (TOPMED)
HGVS:: NC_000003.12:g.86491297T>C, NC_000003.11:g.86540447T>C

Select item 149018360412.

rs1490183604 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:86485511 (GRCh38)
3:86534661 (GRCh37)
Canonical SPDI:: NC_000003.12:86485510:A:G
Gene:: LINC02070 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.86485511A>G, NC_000003.11:g.86534661A>G

Select item 148998957513.

rs1489989575 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 3:86484013 (GRCh38)
3:86533163 (GRCh37)
Canonical SPDI:: NC_000003.12:86484012:T:G
Gene:: LINC02070 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.86484013T>G, NC_000003.11:g.86533163T>G

Select item 148926841814.

rs1489268418 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 3:86486152 (GRCh38)
3:86535302 (GRCh37)
Canonical SPDI:: NC_000003.12:86486151:A:G
Gene:: LINC02070 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.86486152A>G, NC_000003.11:g.86535302A>G

Select item 148909304015.

rs1489093040 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:86494596 (GRCh38)
3:86543746 (GRCh37)
Canonical SPDI:: NC_000003.12:86494595:G:A
Gene:: LINC02070 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000106/2 (TOMMO)
A=0.000342/1 (KOREAN)
HGVS:: NC_000003.12:g.86494596G>A, NC_000003.11:g.86543746G>A

Select item 148900940916.

rs1489009409 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:86488328 (GRCh38)
3:86537478 (GRCh37)
Canonical SPDI:: NC_000003.12:86488327:G:A
Gene:: LINC02070 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000003.12:g.86488328G>A, NC_000003.11:g.86537478G>A

Select item 148893673617.

rs1488936736 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTA>- [Show Flanks]
Chromosome:: 3:86487390 (GRCh38)
3:86536540 (GRCh37)
Canonical SPDI:: NC_000003.12:86487386:TTATTTA:TTA
Gene:: LINC02070 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TTA=0./0 (ALFA)
-=0.000011/3 (TOPMED)
HGVS:: NC_000003.12:g.86487390_86487393del, NC_000003.11:g.86536540_86536543del

Select item 148893546718.

rs1488935467 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 3:86487075 (GRCh38)
3:86536225 (GRCh37)
Canonical SPDI:: NC_000003.12:86487074:A:C
Gene:: LINC02070 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000014/2 (GnomAD)
C=0.000019/5 (TOPMED)
HGVS:: NC_000003.12:g.86487075A>C, NC_000003.11:g.86536225A>C

Select item 148891177219.

rs1488911772 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:86486812 (GRCh38)
3:86535962 (GRCh37)
Canonical SPDI:: NC_000003.12:86486811:T:C
Gene:: LINC02070 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.86486812T>C, NC_000003.11:g.86535962T>C

Select item 148862697820.

rs1488626978 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:86484861 (GRCh38)
3:86534011 (GRCh37)
Canonical SPDI:: NC_000003.12:86484860:G:A
Gene:: LINC02070 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000021/3 (GnomAD)
A=0.000023/6 (TOPMED)
HGVS:: NC_000003.12:g.86484861G>A, NC_000003.11:g.86534011G>A

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