SNP Links for Gene (Select 101927624) - SNP

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Items: 1 to 20 of 3247

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Select item 14914757351.

rs1491475735 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->C
Chromosome:: no mapping
Canonical SPDI:

Select item 14913706832.

rs1491370683 [Homo sapiens]

Variant type:: DELINS
Alleles:: CT>- [Show Flanks]
Chromosome:: 11:1905122 (GRCh38)
11:1926352 (GRCh37)
Canonical SPDI:: NC_000011.10:1905120:TCT:T
Gene:: LINC01150 (Varview), PRR33 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
-=0.000009/1 (GnomAD)
HGVS:: NC_000011.10:g.1905122_1905123del, NC_000011.9:g.1926352_1926353del

Select item 14906523453.

rs1490652345 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 11:1898537 (GRCh38)
11:1919767 (GRCh37)
Canonical SPDI:: NC_000011.10:1898536:G:A,NC_000011.10:1898536:G:C
Gene:: LINC01150 (Varview), PRR33 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000108/2 (ALFA)
A=0.000029/4 (GnomAD)
A=0.000446/2 (Estonian)
HGVS:: NC_000011.10:g.1898537G>A, NC_000011.10:g.1898537G>C, NC_000011.9:g.1919767G>A, NC_000011.9:g.1919767G>C, NW_021160004.1:g.126492C>T, NW_021160004.1:g.126492C>G

Select item 14906358284.

rs1490635828 [Homo sapiens]

Variant type:: DELINS
Alleles:: T>- [Show Flanks]
Chromosome:: 11:1895167 (GRCh38)
11:1916397 (GRCh37)
Canonical SPDI:: NC_000011.10:1895166:TT:T
Gene:: LINC01150 (Varview), PRR33 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TT=0./0 (ALFA)
-=0.000015/4 (TOPMED)
-=0.000022/3 (GnomAD)
HGVS:: NC_000011.10:g.1895168del, NC_000011.9:g.1916398del, NW_021160004.1:g.129862del

Select item 14903794635.

rs1490379463 [Homo sapiens]

Variant type:: INS
Alleles:: ->T [Show Flanks]
Chromosome:: 11:1901326 (GRCh38)
11:1922557 (GRCh37)
Canonical SPDI:: NC_000011.10:1901326::T
Gene:: LINC01150 (Varview), PRR33 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.1901326_1901327insT, NC_000011.9:g.1922556_1922557insT, NW_021160004.1:g.123702_123703insA

Select item 14900439046.

rs1490043904 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:1900456 (GRCh38)
11:1921686 (GRCh37)
Canonical SPDI:: NC_000011.10:1900455:A:G
Gene:: LINC01150 (Varview), PRR33 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.1900456A>G, NC_000011.9:g.1921686A>G, NW_021160004.1:g.124573T>C

Select item 14898553227.

rs1489855322 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 11:1899867 (GRCh38)
11:1921097 (GRCh37)
Canonical SPDI:: NC_000011.10:1899866:A:T
Gene:: LINC01150 (Varview), PRR33 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.1899867A>T, NC_000011.9:g.1921097A>T, NW_021160004.1:g.125162T>A

Select item 14893305998.

rs1489330599 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 11:1899998 (GRCh38)
11:1921228 (GRCh37)
Canonical SPDI:: NC_000011.10:1899997:T:A
Gene:: LINC01150 (Varview), PRR33 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.1899998T>A, NC_000011.9:g.1921228T>A, NW_021160004.1:g.125031A>T

Select item 14889473769.

rs1488947376 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:1906686 (GRCh38)
11:1927916 (GRCh37)
Canonical SPDI:: NC_000011.10:1906685:C:T
Gene:: LINC01150 (Varview), PRR33 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000014/2 (GnomAD)
T=0.000106/2 (TOMMO)
T=0.000546/1 (Korea1K)
HGVS:: NC_000011.10:g.1906686C>T, NC_000011.9:g.1927916C>T, NW_021160004.1:g.118341G>A

Select item 148866454810.

rs1488664548 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:1904045 (GRCh38)
11:1925275 (GRCh37)
Canonical SPDI:: NC_000011.10:1904044:A:G
Gene:: LINC01150 (Varview), PRR33 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.1904045A>G, NC_000011.9:g.1925275A>G, NW_021160004.1:g.120983T>C

Select item 148858839911.

rs1488588399 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:1903146 (GRCh38)
11:1924376 (GRCh37)
Canonical SPDI:: NC_000011.10:1903145:A:G
Gene:: LINC01150 (Varview), PRR33 (Varview)
Functional Consequence:: non_coding_transcript_variant,genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000019/5 (TOPMED)
HGVS:: NC_000011.10:g.1903146A>G, NC_000011.9:g.1924376A>G, NW_021160004.1:g.121882T>C, NR_120534.1:n.565A>G

Select item 148857321412.

rs1488573214 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:1895781 (GRCh38)
11:1917011 (GRCh37)
Canonical SPDI:: NC_000011.10:1895780:T:C
Gene:: LINC01150 (Varview), PRR33 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.1895781T>C, NC_000011.9:g.1917011T>C, NW_021160004.1:g.129248A>G

Select item 148819414113.

rs1488194141 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 11:1897779 (GRCh38)
11:1919009 (GRCh37)
Canonical SPDI:: NC_000011.10:1897778:C:A
Gene:: LINC01150 (Varview), PRR33 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.1897779C>A, NC_000011.9:g.1919009C>A, NW_021160004.1:g.127250G>T

Select item 148798929814.

rs1487989298 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:1904780 (GRCh38)
11:1926010 (GRCh37)
Canonical SPDI:: NC_000011.10:1904779:A:G
Gene:: LINC01150 (Varview), PRR33 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000026/7 (TOPMED)
HGVS:: NC_000011.10:g.1904780A>G, NC_000011.9:g.1926010A>G, NW_021160004.1:g.120248T>C

Select item 148776700415.

rs1487767004 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 11:1904691 (GRCh38)
11:1925921 (GRCh37)
Canonical SPDI:: NC_000011.10:1904690:A:G
Gene:: LINC01150 (Varview), PRR33 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000015/4 (TOPMED)
HGVS:: NC_000011.10:g.1904691A>G, NC_000011.9:g.1925921A>G, NW_021160004.1:g.120337T>C

Select item 148751347716.

rs1487513477 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 11:1903839 (GRCh38)
11:1925069 (GRCh37)
Canonical SPDI:: NC_000011.10:1903838:C:G,NC_000011.10:1903838:C:T
Gene:: LINC01150 (Varview), PRR33 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.000069/1 (ALFA)
T=0.000128/18 (GnomAD)
HGVS:: NC_000011.10:g.1903839C>G, NC_000011.10:g.1903839C>T, NC_000011.9:g.1925069C>G, NC_000011.9:g.1925069C>T, NW_021160004.1:g.121189G>C, NW_021160004.1:g.121189G>A

Select item 148743938517.

rs1487439385 [Homo sapiens]

Variant type:: INS
Alleles:: ->C [Show Flanks]
Chromosome:: 11:1905126 (GRCh38)
11:1926357 (GRCh37)
Canonical SPDI:: NC_000011.10:1905126::C
Gene:: LINC01150 (Varview), PRR33 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000011.10:g.1905126_1905127insC, NC_000011.9:g.1926356_1926357insC, NW_021160004.1:g.119900_119901insG

Select item 148731130018.

rs1487311300 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:1897781 (GRCh38)
11:1919011 (GRCh37)
Canonical SPDI:: NC_000011.10:1897780:C:T
Gene:: LINC01150 (Varview), PRR33 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00003/8 (TOPMED)
T=0.000043/6 (GnomAD)
HGVS:: NC_000011.10:g.1897781C>T, NC_000011.9:g.1919011C>T, NW_021160004.1:g.127248G>A

Select item 148730015219.

rs1487300152 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:1895417 (GRCh38)
11:1916647 (GRCh37)
Canonical SPDI:: NC_000011.10:1895416:G:A
Gene:: LINC01150 (Varview), PRR33 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0.0002/1 (ALFA)
HGVS:: NC_000011.10:g.1895417G>A, NC_000011.9:g.1916647G>A, NW_021160004.1:g.129612C>T

Select item 148662244020.

rs1486622440 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:1897247 (GRCh38)
11:1918477 (GRCh37)
Canonical SPDI:: NC_000011.10:1897246:C:T
Gene:: LINC01150 (Varview), PRR33 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.1897247C>T, NC_000011.9:g.1918477C>T, NW_021160004.1:g.127782G>A

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