SNP Links for Gene (Select 101928271) - SNP

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Select item 14895884321.

rs1489588432 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:20858106 (GRCh38)
2:21057866 (GRCh37)
Canonical SPDI:: NC_000002.12:20858105:G:A
Gene:: LINC02850 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000002.12:g.20858106G>A, NC_000002.11:g.21057866G>A

Select item 14895029602.

rs1489502960 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:20861675 (GRCh38)
2:21061435 (GRCh37)
Canonical SPDI:: NC_000002.12:20861674:A:G
Gene:: LINC02850 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.20861675A>G, NC_000002.11:g.21061435A>G

Select item 14886092713.

rs1488609271 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:20858530 (GRCh38)
2:21058290 (GRCh37)
Canonical SPDI:: NC_000002.12:20858529:G:A
Gene:: LINC02850 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.20858530G>A, NC_000002.11:g.21058290G>A

Select item 14876222404.

rs1487622240 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:20858202 (GRCh38)
2:21057962 (GRCh37)
Canonical SPDI:: NC_000002.12:20858201:A:G
Gene:: LINC02850 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.20858202A>G, NC_000002.11:g.21057962A>G

Select item 14871579795.

rs1487157979 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 2:20858270 (GRCh38)
2:21058030 (GRCh37)
Canonical SPDI:: NC_000002.12:20858269:C:A
Gene:: LINC02850 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.20858270C>A, NC_000002.11:g.21058030C>A

Select item 14865770266.

rs1486577026 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 2:20859961 (GRCh38)
2:21059721 (GRCh37)
Canonical SPDI:: NC_000002.12:20859960:G:C,NC_000002.12:20859960:G:T
Gene:: LINC02850 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.000014/2 (GnomAD)
C=0.000023/6 (TOPMED)
C=0.000212/4 (TOMMO)
HGVS:: NC_000002.12:g.20859961G>C, NC_000002.12:g.20859961G>T, NC_000002.11:g.21059721G>C, NC_000002.11:g.21059721G>T

Select item 14864779847.

rs1486477984 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:20861465 (GRCh38)
2:21061225 (GRCh37)
Canonical SPDI:: NC_000002.12:20861464:C:T
Gene:: LINC02850 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000002.12:g.20861465C>T, NC_000002.11:g.21061225C>T, XR_244595.1:n.1302C>T

Select item 14864279078.

rs1486427907 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:20860376 (GRCh38)
2:21060136 (GRCh37)
Canonical SPDI:: NC_000002.12:20860375:G:A
Gene:: LINC02850 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.20860376G>A, NC_000002.11:g.21060136G>A, XR_244595.1:n.213G>A

Select item 14860138859.

rs1486013885 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:20860493 (GRCh38)
2:21060253 (GRCh37)
Canonical SPDI:: NC_000002.12:20860492:A:G
Gene:: LINC02850 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.20860493A>G, NC_000002.11:g.21060253A>G, XR_244595.1:n.330A>G

Select item 148562578810.

rs1485625788 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 2:20859015 (GRCh38)
2:21058775 (GRCh37)
Canonical SPDI:: NC_000002.12:20859014:T:G
Gene:: LINC02850 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.20859015T>G, NC_000002.11:g.21058775T>G

Select item 148501758711.

rs1485017587 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:20859003 (GRCh38)
2:21058763 (GRCh37)
Canonical SPDI:: NC_000002.12:20859002:T:C
Gene:: LINC02850 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.20859003T>C, NC_000002.11:g.21058763T>C

Select item 148479149212.

rs1484791492 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:20859793 (GRCh38)
2:21059553 (GRCh37)
Canonical SPDI:: NC_000002.12:20859792:A:G
Gene:: LINC02850 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency
MAF:: G=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.20859793A>G, NC_000002.11:g.21059553A>G, XR_244595.1:n.23A>G

Select item 148441802413.

rs1484418024 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:20861221 (GRCh38)
2:21060981 (GRCh37)
Canonical SPDI:: NC_000002.12:20861220:A:G
Gene:: LINC02850 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.20861221A>G, NC_000002.11:g.21060981A>G, XR_244595.1:n.1058A>G

Select item 148418021014.

rs1484180210 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:20858471 (GRCh38)
2:21058231 (GRCh37)
Canonical SPDI:: NC_000002.12:20858470:G:A
Gene:: LINC02850 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000015/4 (TOPMED)
HGVS:: NC_000002.12:g.20858471G>A, NC_000002.11:g.21058231G>A

Select item 148390286715.

rs1483902867 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 2:20860978 (GRCh38)
2:21060738 (GRCh37)
Canonical SPDI:: NC_000002.12:20860977:A:G,NC_000002.12:20860977:A:T
Gene:: LINC02850 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000312/2 (1000Genomes)
HGVS:: NC_000002.12:g.20860978A>G, NC_000002.12:g.20860978A>T, NC_000002.11:g.21060738A>G, NC_000002.11:g.21060738A>T, XR_244595.1:n.815A>G, XR_244595.1:n.815A>T

Select item 148312347216.

rs1483123472 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 2:20861560 (GRCh38)
2:21061320 (GRCh37)
Canonical SPDI:: NC_000002.12:20861559:A:C
Gene:: LINC02850 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000019/5 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000002.12:g.20861560A>C, NC_000002.11:g.21061320A>C, XR_244595.1:n.1397A>C

Select item 148039706117.

rs1480397061 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:20860271 (GRCh38)
2:21060031 (GRCh37)
Canonical SPDI:: NC_000002.12:20860270:T:C
Gene:: LINC02850 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.20860271T>C, NC_000002.11:g.21060031T>C

Select item 147959154118.

rs1479591541 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:20859341 (GRCh38)
2:21059101 (GRCh37)
Canonical SPDI:: NC_000002.12:20859340:T:C
Gene:: LINC02850 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.20859341T>C, NC_000002.11:g.21059101T>C

Select item 147926814019.

rs1479268140 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:20861932 (GRCh38)
2:21061692 (GRCh37)
Canonical SPDI:: NC_000002.12:20861931:A:G
Gene:: LINC02850 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
HGVS:: NC_000002.12:g.20861932A>G, NC_000002.11:g.21061692A>G

Select item 147912014920.

rs1479120149 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:20859167 (GRCh38)
2:21058927 (GRCh37)
Canonical SPDI:: NC_000002.12:20859166:G:A
Gene:: LINC02850 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.20859167G>A, NC_000002.11:g.21058927G>A

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