SNP Links for Gene (Select 101928361) - SNP

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Select item 14914524761.

rs1491452476 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->TA [Show Flanks]
Chromosome:: 2:143607549 (GRCh38)
2:144365119 (GRCh37)
Canonical SPDI:: NC_000002.12:143607549:A:ATA
Gene:: ARHGAP15 (Varview), LOC101928361 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
HGVS:: NC_000002.12:g.143607550_143607551insTA, NC_000002.11:g.144365119_144365120insTA, XR_007087253.1:n.22374_22375insTA

Select item 14910834282.

rs1491083428 [Homo sapiens]

Variant type:: DEL
Alleles:: AG>- [Show Flanks]
Chromosome:: 2:143606070 (GRCh38)
2:144363639 (GRCh37)
Canonical SPDI:: NC_000002.12:143606069:AG:
Gene:: ARHGAP15 (Varview), LOC101928361 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.00059/7 (ALFA)
-=0.00124/18 (TOMMO)
-=0.02479/994 (GnomAD)
HGVS:: NC_000002.12:g.143606070_143606071del, NC_000002.11:g.144363639_144363640del, XR_007087253.1:n.21476_21477del

Select item 14907625383.

rs1490762538 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:143606970 (GRCh38)
2:144364539 (GRCh37)
Canonical SPDI:: NC_000002.12:143606969:T:C
Gene:: ARHGAP15 (Varview), LOC101928361 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000015/4 (TOPMED)
C=0.000029/4 (GnomAD)
HGVS:: NC_000002.12:g.143606970T>C, NC_000002.11:g.144364539T>C

Select item 14905360504.

rs1490536050 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 2:143599745 (GRCh38)
2:144357314 (GRCh37)
Canonical SPDI:: NC_000002.12:143599744:T:C,NC_000002.12:143599744:T:G
Gene:: ARHGAP15 (Varview), LOC101928361 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000014/2 (GnomAD)
HGVS:: NC_000002.12:g.143599745T>C, NC_000002.12:g.143599745T>G, NC_000002.11:g.144357314T>C, NC_000002.11:g.144357314T>G, XR_007087253.1:n.15151T>C, XR_007087253.1:n.15151T>G

Select item 14902101785.

rs1490210178 [Homo sapiens]

Variant type:: DELINS
Alleles:: T>- [Show Flanks]
Chromosome:: 2:143600849 (GRCh38)
2:144358418 (GRCh37)
Canonical SPDI:: NC_000002.12:143600848:TTTTTT:TTTTT
Gene:: ARHGAP15 (Varview), LOC101928361 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTT=0./0 (ALFA)
-=0./0 (GnomAD)
-=0.000011/3 (TOPMED)
-=0.000156/1 (1000Genomes)
HGVS:: NC_000002.12:g.143600854del, NC_000002.11:g.144358423del, XR_007087253.1:n.16260del

Select item 14901943346.

rs1490194334 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 2:143599606 (GRCh38)
2:144357175 (GRCh37)
Canonical SPDI:: NC_000002.12:143599605:T:A
Gene:: ARHGAP15 (Varview), LOC101928361 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
A=0.000342/1 (KOREAN)
A=0.000546/1 (Korea1K)
A=0.000885/15 (TOMMO)
HGVS:: NC_000002.12:g.143599606T>A, NC_000002.11:g.144357175T>A, XR_007087253.1:n.15012T>A

Select item 14899462017.

rs1489946201 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 2:143607455 (GRCh38)
2:144365024 (GRCh37)
Canonical SPDI:: NC_000002.12:143607454:C:T
Gene:: ARHGAP15 (Varview), LOC101928361 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
T=0.000029/4 (GnomAD)
HGVS:: NC_000002.12:g.143607455C>T, NC_000002.11:g.144365024C>T

Select item 14896432688.

rs1489643268 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:143600223 (GRCh38)
2:144357792 (GRCh37)
Canonical SPDI:: NC_000002.12:143600222:T:C
Gene:: ARHGAP15 (Varview), LOC101928361 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.143600223T>C, NC_000002.11:g.144357792T>C, XR_007087253.1:n.15629T>C

Select item 14889929789.

rs1488992978 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 2:143601306 (GRCh38)
2:144358875 (GRCh37)
Canonical SPDI:: NC_000002.12:143601305:T:A
Gene:: ARHGAP15 (Varview), LOC101928361 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.143601306T>A, NC_000002.11:g.144358875T>A, XR_007087253.1:n.16712T>A

Select item 148892269610.

rs1488922696 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 2:143600995 (GRCh38)
2:144358565 (GRCh37)
Canonical SPDI:: NC_000002.12:143600995:AA:AAA
Gene:: ARHGAP15 (Varview), LOC101928361 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAA=0./0 (ALFA)
A=0.000079/11 (GnomAD)
A=0.000079/21 (TOPMED)
HGVS:: NC_000002.12:g.143600997dup, NC_000002.11:g.144358566dup, XR_007087253.1:n.16403dup

Select item 148860600711.

rs1488606007 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 2:143608825 (GRCh38)
2:144366394 (GRCh37)
Canonical SPDI:: NC_000002.12:143608824:C:G
Gene:: ARHGAP15 (Varview), LOC101928361 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000021/3 (GnomAD)
G=0.000049/13 (TOPMED)
HGVS:: NC_000002.12:g.143608825C>G, NC_000002.11:g.144366394C>G, XR_007087253.1:n.23649C>G

Select item 148766917912.

rs1487669179 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 2:143606329 (GRCh38)
2:144363898 (GRCh37)
Canonical SPDI:: NC_000002.12:143606328:A:T
Gene:: ARHGAP15 (Varview), LOC101928361 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.143606329A>T, NC_000002.11:g.144363898A>T, XR_007087253.1:n.21735A>T

Select item 148744128113.

rs1487441281 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:143603013 (GRCh38)
2:144360582 (GRCh37)
Canonical SPDI:: NC_000002.12:143603012:T:C
Gene:: ARHGAP15 (Varview), LOC101928361 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.143603013T>C, NC_000002.11:g.144360582T>C, XR_007087253.1:n.18419T>C

Select item 148741037414.

rs1487410374 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:143602586 (GRCh38)
2:144360155 (GRCh37)
Canonical SPDI:: NC_000002.12:143602585:A:G
Gene:: ARHGAP15 (Varview), LOC101928361 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.143602586A>G, NC_000002.11:g.144360155A>G, XR_007087253.1:n.17992A>G

Select item 148654071715.

rs1486540717 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 2:143599527 (GRCh38)
2:144357096 (GRCh37)
Canonical SPDI:: NC_000002.12:143599526:T:G
Gene:: ARHGAP15 (Varview), LOC101928361 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.00008/1 (ALFA)
G=0.00034/1 (KOREAN)
HGVS:: NC_000002.12:g.143599527T>G, NC_000002.11:g.144357096T>G, XR_007087253.1:n.14933T>G

Select item 148653973916.

rs1486539739 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 2:143600101 (GRCh38)
2:144357670 (GRCh37)
Canonical SPDI:: NC_000002.12:143600100:A:G
Gene:: ARHGAP15 (Varview), LOC101928361 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000029/4 (GnomAD)
G=0.000057/15 (TOPMED)
HGVS:: NC_000002.12:g.143600101A>G, NC_000002.11:g.144357670A>G, XR_007087253.1:n.15507A>G

Select item 148646862917.

rs1486468629 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 2:143599048 (GRCh38)
2:144356618 (GRCh37)
Canonical SPDI:: NC_000002.12:143599048:T:TT
Gene:: ARHGAP15 (Varview), LOC101928361 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TT=0./0 (ALFA)
T=0.000014/2 (GnomAD)
T=0.000015/4 (TOPMED)
HGVS:: NC_000002.12:g.143599049dup, NC_000002.11:g.144356618dup, XR_007087253.1:n.14455dup

Select item 148644732718.

rs1486447327 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 2:143606998 (GRCh38)
2:144364567 (GRCh37)
Canonical SPDI:: NC_000002.12:143606997:G:A
Gene:: ARHGAP15 (Varview), LOC101928361 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000002.12:g.143606998G>A, NC_000002.11:g.144364567G>A

Select item 148635767919.

rs1486357679 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->TTTT
Chromosome:: no mapping
Canonical SPDI:

Select item 148581934020.

rs1485819340 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 2:143600010 (GRCh38)
2:144357579 (GRCh37)
Canonical SPDI:: NC_000002.12:143600009:T:C
Gene:: ARHGAP15 (Varview), LOC101928361 (Varview)
Functional Consequence:: intron_variant,genic_downstream_transcript_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000002.12:g.143600010T>C, NC_000002.11:g.144357579T>C, XR_007087253.1:n.15416T>C

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