SNP Links for Gene (Select 101928437) - SNP

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Select item 14915823061.

rs1491582306 [Homo sapiens]

Variant type:: INS
Alleles:: ->T [Show Flanks]
Chromosome:: X:113175109 (GRCh38)
X:112418337 (GRCh37)
Canonical SPDI:: NC_000023.11:113175109::T
Gene:: LOC101928437 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000023.11:g.113175109_113175110insT, NC_000023.10:g.112418336_112418337insT

Select item 14915683152.

rs1491568315 [Homo sapiens]

Variant type:: DEL
Alleles:: TG>- [Show Flanks]
Chromosome:: X:113103134 (GRCh38)
X:112346362 (GRCh37)
Canonical SPDI:: NC_000023.11:113103133:TG:
Gene:: LOC101928437 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000023.11:g.113103134_113103135del, NC_000023.10:g.112346362_112346363del

Select item 14915612523.

rs1491561252 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->TTTTTTTTTTTTTGTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: X:113248421 (GRCh38)
X:112491649 (GRCh37)
Canonical SPDI:: NC_000023.11:113248421:TTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTT
Gene:: LOC101928437 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000023.11:g.113248422_113248437T[29]GTTTTTTTTTTTTTTTT[1], NC_000023.10:g.112491649_112491664T[29]GTTTTTTTTTTTTTTTT[1]

Select item 14915394694.

rs1491539469 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CCTC [Show Flanks]
Chromosome:: X:113133823 (GRCh38)
X:112377052 (GRCh37)
Canonical SPDI:: NC_000023.11:113133823:CTC:CTCCCTC
Gene:: LOC101928437 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: CTCC=0.0009/1 (GnomAD)
HGVS:: NC_000023.11:g.113133826_113133827insCCTC, NC_000023.10:g.112377054_112377055insCCTC

Select item 14915300535.

rs1491530053 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: X:113463145 (GRCh38)
X:112706406 (GRCh37)
Canonical SPDI:: NC_000023.11:113463144:CA:
Gene:: LOC101928437 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.0091/108 (ALFA)
HGVS:: NC_000023.11:g.113463145_113463146del, NW_004070878.1:g.44430_44431del, NC_000023.10:g.112706406_112706407del

Select item 14915264336.

rs1491526433 has merged into rs58824230 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAA>-,AAAA,AAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA [Show Flanks]
Chromosome:: X:113307741 (GRCh38)
X:112550968 (GRCh37)
Canonical SPDI:: NC_000023.11:113307731:AAAAAAAAAAAAAAA:AAAAAAAAA,NC_000023.11:113307731:AAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000023.11:113307731:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000023.11:113307731:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000023.11:113307731:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000023.11:113307731:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000023.11:113307731:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000023.11:113307731:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000023.11:113307731:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000023.11:113307731:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000023.11:113307731:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000023.11:113307731:AAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA
Gene:: LOC101928437 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAAAAA=0.0006/4 (ALFA)
A=0.2283/862 (1000Genomes)
-=0.411/1524 (TWINSUK)
-=0.425/17 (GENOME_DK)
-=0.4251/1228 (ALSPAC)
HGVS:: NC_000023.11:g.113307741_113307746del, NC_000023.11:g.113307745_113307746del, NC_000023.11:g.113307746del, NC_000023.11:g.113307746dup, NC_000023.11:g.113307745_113307746dup, NC_000023.11:g.113307744_113307746dup, NC_000023.11:g.113307743_113307746dup, NC_000023.11:g.113307742_113307746dup, NC_000023.11:g.113307741_113307746dup, NC_000023.11:g.113307739_113307746dup, NC_000023.11:g.113307737_113307746dup, NC_000023.11:g.113307735_113307746dup, NC_000023.10:g.112550968_112550973del, NC_000023.10:g.112550972_112550973del, NC_000023.10:g.112550973del, NC_000023.10:g.112550973dup, NC_000023.10:g.112550972_112550973dup, NC_000023.10:g.112550971_112550973dup, NC_000023.10:g.112550970_112550973dup, NC_000023.10:g.112550969_112550973dup, NC_000023.10:g.112550968_112550973dup, NC_000023.10:g.112550966_112550973dup, NC_000023.10:g.112550964_112550973dup, NC_000023.10:g.112550962_112550973dup

Select item 14915254677.

rs1491525467 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: X:113276518 (GRCh38)
X:112519745 (GRCh37)
Canonical SPDI:: NC_000023.11:113276517:CA:
Gene:: LOC101928437 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00034/4 (ALFA)
HGVS:: NC_000023.11:g.113276518_113276519del, NC_000023.10:g.112519745_112519746del

Select item 14915233748.

rs1491523374 [Homo sapiens]

Variant type:: DELINS
Alleles:: AA>-,A [Show Flanks]
Chromosome:: X:113297481 (GRCh38)
X:112540708 (GRCh37)
Canonical SPDI:: NC_000023.11:113297479:AAA:A,NC_000023.11:113297479:AAA:AA
Gene:: LOC101928437 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.0011/18 (ALFA)
-=0.00106/4 (1000Genomes)
-=0.00436/432 (GnomAD)
HGVS:: NC_000023.11:g.113297481_113297482del, NC_000023.11:g.113297482del, NC_000023.10:g.112540708_112540709del, NC_000023.10:g.112540709del

Select item 14914905279.

rs1491490527 [Homo sapiens]

Variant type:: DELINS
Alleles:: AT>- [Show Flanks]
Chromosome:: X:113173072 (GRCh38)
X:112416299 (GRCh37)
Canonical SPDI:: NC_000023.11:113173063:ATATATATAT:ATATATAT
Gene:: LOC101928437 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: ATATATAT=0.00126/15 (ALFA)
HGVS:: NC_000023.11:g.113173064AT[4], NC_000023.10:g.112416291AT[4]

Select item 149148792410.

rs1491487924 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CTTTTTTT [Show Flanks]
Chromosome:: X:113169248 (GRCh38)
X:112412476 (GRCh37)
Canonical SPDI:: NC_000023.11:113169248:TTTTTTT:TTTTTTTCTTTTTTT
Gene:: LOC101928437 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TTTTTTTCTTTTTTT=0./0 (ALFA)
HGVS:: NC_000023.11:g.113169249_113169255T[7]CTTTTTTT[1], NC_000023.10:g.112412476_112412482T[7]CTTTTTTT[1]

Select item 149148737411.

rs1491487374 [Homo sapiens]

Variant type:: DEL
Alleles:: CA>- [Show Flanks]
Chromosome:: X:113273246 (GRCh38)
X:112516473 (GRCh37)
Canonical SPDI:: NC_000023.11:113273245:CA:
Gene:: LOC101928437 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0.01197/142 (ALFA)
-=0.00125/20 (GnomAD)
-=0.00451/100 (TOMMO)
HGVS:: NC_000023.11:g.113273246_113273247del, NC_000023.10:g.112516473_112516474del

Select item 149147876812.

rs1491478768 has merged into rs1159455878 [Homo sapiens]

Variant type:: DELINS
Alleles:: TA>-,TATA,TATATA [Show Flanks]
Chromosome:: X:113438349 (GRCh38)
X:112681604 (GRCh37)
Canonical SPDI:: NC_000023.11:113438339:ATATATATATA:ATATATATA,NC_000023.11:113438339:ATATATATATA:ATATATATATATA,NC_000023.11:113438339:ATATATATATA:ATATATATATATATA
Gene:: LOC101928437 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATATATATATATATA=0./0 (ALFA)
AT=0.00005/1 (TOMMO)
HGVS:: NC_000023.11:g.113438341TA[4], NC_000023.11:g.113438341TA[6], NC_000023.11:g.113438341TA[7], NW_004070878.1:g.19626TA[4], NW_004070878.1:g.19626TA[6], NW_004070878.1:g.19626TA[7], NC_000023.10:g.112681596TA[4], NC_000023.10:g.112681596TA[6], NC_000023.10:g.112681596TA[7]

Select item 149147353513.

rs1491473535 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G [Show Flanks]
Chromosome:: X:113103095 (GRCh38)
X:112346324 (GRCh37)
Canonical SPDI:: NC_000023.11:113103095:G:GG
Gene:: LOC101928437 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: GG=0./0 (ALFA)
G=0.00009/9 (GnomAD)
HGVS:: NC_000023.11:g.113103096dup, NC_000023.10:g.112346324dup

Select item 149147343914.

rs1491473439 [Homo sapiens]

Variant type:: DEL
Alleles:: GG>- [Show Flanks]
Chromosome:: X:113046249 (GRCh38)
X:112289477 (GRCh37)
Canonical SPDI:: NC_000023.11:113046248:GG:
Gene:: LOC101928437 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000023.11:g.113046249_113046250del, NC_000023.10:g.112289477_112289478del

Select item 149145508115.

rs1491455081 [Homo sapiens]

Variant type:: DEL
Alleles:: CT>- [Show Flanks]
Chromosome:: X:113413692 (GRCh38)
X:112656919 (GRCh37)
Canonical SPDI:: NC_000023.11:113413691:CT:
Gene:: LOC101928437 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000023.11:g.113413692_113413693del, NC_000023.10:g.112656919_112656920del

Select item 149145055716.

rs1491450557 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AATATATATATTATATATAT [Show Flanks]
Chromosome:: X:113438340 (GRCh38)
X:112681596 (GRCh37)
Canonical SPDI:: NC_000023.11:113438340:TATATATATAATATATATATTATATATAT:TATATATATAATATATATATTATATATATAATATATATATTATATATAT
Gene:: LOC101928437 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TATATATATAATATATATATTATATATATAATATATATATTATATATAT=0.00008/1 (ALFA)
TATATATATAATATATATAT=0.00378/340 (GnomAD)
HGVS:: NC_000023.11:g.113438350_113438369dup, NW_004070878.1:g.19635_19654dup, NC_000023.10:g.112681605_112681624dup

Select item 149143121317.

rs1491431213 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CGTATATA [Show Flanks]
Chromosome:: X:113093784 (GRCh38)
X:112337013 (GRCh37)
Canonical SPDI:: NC_000023.11:113093784:GTATATA:GTATATACGTATATA
Gene:: LOC101928437 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: GTATATACGTATATA=0./0 (ALFA)
HGVS:: NC_000023.11:g.113093791_113093792insCGTATATA, NC_000023.10:g.112337019_112337020insCGTATATA

Select item 149142660618.

rs1491426606 has merged into rs34928584 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTTTTTT>-,T,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: X:113068126 (GRCh38)
X:112311354 (GRCh37)
Canonical SPDI:: NC_000023.11:113068114:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000023.11:113068114:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000023.11:113068114:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000023.11:113068114:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000023.11:113068114:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000023.11:113068114:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000023.11:113068114:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000023.11:113068114:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000023.11:113068114:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000023.11:113068114:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:113068114:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:113068114:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:113068114:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:113068114:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:113068114:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:113068114:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:113068114:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:113068114:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000023.11:113068114:TTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: LOC101928437 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000023.11:g.113068126_113068139del, NC_000023.11:g.113068127_113068139del, NC_000023.11:g.113068130_113068139del, NC_000023.11:g.113068131_113068139del, NC_000023.11:g.113068132_113068139del, NC_000023.11:g.113068133_113068139del, NC_000023.11:g.113068134_113068139del, NC_000023.11:g.113068135_113068139del, NC_000023.11:g.113068136_113068139del, NC_000023.11:g.113068137_113068139del, NC_000023.11:g.113068138_113068139del, NC_000023.11:g.113068139del, NC_000023.11:g.113068139dup, NC_000023.11:g.113068138_113068139dup, NC_000023.11:g.113068137_113068139dup, NC_000023.11:g.113068135_113068139dup, NC_000023.11:g.113068134_113068139dup, NC_000023.11:g.113068133_113068139dup, NC_000023.11:g.113068126_113068139dup, NC_000023.10:g.112311354_112311367del, NC_000023.10:g.112311355_112311367del, NC_000023.10:g.112311358_112311367del, NC_000023.10:g.112311359_112311367del, NC_000023.10:g.112311360_112311367del, NC_000023.10:g.112311361_112311367del, NC_000023.10:g.112311362_112311367del, NC_000023.10:g.112311363_112311367del, NC_000023.10:g.112311364_112311367del, NC_000023.10:g.112311365_112311367del, NC_000023.10:g.112311366_112311367del, NC_000023.10:g.112311367del, NC_000023.10:g.112311367dup, NC_000023.10:g.112311366_112311367dup, NC_000023.10:g.112311365_112311367dup, NC_000023.10:g.112311363_112311367dup, NC_000023.10:g.112311362_112311367dup, NC_000023.10:g.112311361_112311367dup, NC_000023.10:g.112311354_112311367dup

Select item 149140055519.

rs1491400555 has merged into rs111692853 [Homo sapiens]

Variant type:: DELINS
Alleles:: TT>-,T,TTT [Show Flanks]
Chromosome:: X:113390125 (GRCh38)
X:112633352 (GRCh37)
Canonical SPDI:: NC_000023.11:113390114:TTTTTTTTTTTT:TTTTTTTTTT,NC_000023.11:113390114:TTTTTTTTTTTT:TTTTTTTTTTT,NC_000023.11:113390114:TTTTTTTTTTTT:TTTTTTTTTTTTT
Gene:: LOC101928437 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTT=0./0 (ALFA)
-=0.4/16 (GENOME_DK)
-=0.427455/113143 (TOPMED)
-=0.430253/1243 (ALSPAC)
-=0.45658/1693 (TWINSUK)
-=0.481589/1818 (1000Genomes)
HGVS:: NC_000023.11:g.113390125_113390126del, NC_000023.11:g.113390126del, NC_000023.11:g.113390126dup, NC_000023.10:g.112633352_112633353del, NC_000023.10:g.112633353del, NC_000023.10:g.112633353dup

Select item 149139953320.

rs1491399533 [Homo sapiens]

Variant type:: DEL
Alleles:: TG>- [Show Flanks]
Chromosome:: X:113215230 (GRCh38)
X:112458457 (GRCh37)
Canonical SPDI:: NC_000023.11:113215229:TG:
Gene:: LOC101928437 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0.00025/3 (ALFA)
HGVS:: NC_000023.11:g.113215230_113215231del, NC_000023.10:g.112458457_112458458del

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