SNP Links for Gene (Select 101929172) - SNP

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Items: 1 to 20 of 3090

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Select item 14907305051.

rs1490730505 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:21307561 (GRCh38)
8:21165072 (GRCh37)
Canonical SPDI:: NC_000008.11:21307560:C:T
Gene:: LOC101929172 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.21307561C>T, NC_000008.10:g.21165072C>T

Select item 14906534722.

rs1490653472 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C,G [Show Flanks]
Chromosome:: 8:21305210 (GRCh38)
8:21162721 (GRCh37)
Canonical SPDI:: NC_000008.11:21305209:T:A,NC_000008.11:21305209:T:C,NC_000008.11:21305209:T:G
Gene:: LOC101929172 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000015/4 (TOPMED)
G=0.000212/4 (TOMMO)
HGVS:: NC_000008.11:g.21305210T>A, NC_000008.11:g.21305210T>C, NC_000008.11:g.21305210T>G, NC_000008.10:g.21162721T>A, NC_000008.10:g.21162721T>C, NC_000008.10:g.21162721T>G

Select item 14905367933.

rs1490536793 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:21306224 (GRCh38)
8:21163735 (GRCh37)
Canonical SPDI:: NC_000008.11:21306223:G:A
Gene:: LOC101929172 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.21306224G>A, NC_000008.10:g.21163735G>A

Select item 14899719624.

rs1489971962 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,T [Show Flanks]
Chromosome:: 8:21297705 (GRCh38)
8:21155216 (GRCh37)
Canonical SPDI:: NC_000008.11:21297704:G:A,NC_000008.11:21297704:G:T
Gene:: LOC101929172 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.21297705G>A, NC_000008.11:g.21297705G>T, NC_000008.10:g.21155216G>A, NC_000008.10:g.21155216G>T

Select item 14898358585.

rs1489835858 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 8:21304720 (GRCh38)
8:21162231 (GRCh37)
Canonical SPDI:: NC_000008.11:21304719:C:G
Gene:: LOC101929172 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.21304720C>G, NC_000008.10:g.21162231C>G

Select item 14897426886.

rs1489742688 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:21300400 (GRCh38)
8:21157911 (GRCh37)
Canonical SPDI:: NC_000008.11:21300399:A:G
Gene:: LOC101929172 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.21300400A>G, NC_000008.10:g.21157911A>G

Select item 14894848887.

rs1489484888 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 8:21301407 (GRCh38)
8:21158918 (GRCh37)
Canonical SPDI:: NC_000008.11:21301406:A:T
Gene:: LOC101929172 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.21301407A>T, NC_000008.10:g.21158918A>T

Select item 14893806708.

rs1489380670 has merged into rs139117262 [Homo sapiens]

Variant type:: DELINS
Alleles:: GAGAGA>-,GA,GAGA [Show Flanks]
Chromosome:: 8:21299761 (GRCh38)
8:21157272 (GRCh37)
Canonical SPDI:: NC_000008.11:21299757:AGAGAGAGA:AGA,NC_000008.11:21299757:AGAGAGAGA:AGAGA,NC_000008.11:21299757:AGAGAGAGA:AGAGAGA
Gene:: LOC101929172 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AGAGA=0.000062/1 (ALFA)
-=0.076597/343 (Estonian)
-=0.110673/29294 (TOPMED)
-=0.115741/25 (Vietnamese)
-=0.11717/1964 (TOMMO)
-=0.126198/632 (1000Genomes)
-=0.15/6 (GENOME_DK)
-=0.168333/101 (NorthernSweden)
HGVS:: NC_000008.11:g.21299759GA[1], NC_000008.11:g.21299759GA[2], NC_000008.11:g.21299759GA[3], NC_000008.10:g.21157270GA[1], NC_000008.10:g.21157270GA[2], NC_000008.10:g.21157270GA[3]

Select item 14891337209.

rs1489133720 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 8:21300065 (GRCh38)
8:21157576 (GRCh37)
Canonical SPDI:: NC_000008.11:21300064:C:A,NC_000008.11:21300064:C:T
Gene:: LOC101929172 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0./0 (KOREAN)
A=0.000035/1 (TOMMO)
T=0.000043/6 (GnomAD)
T=0.000057/15 (TOPMED)
T=0.004673/1 (Vietnamese)
HGVS:: NC_000008.11:g.21300065C>A, NC_000008.11:g.21300065C>T, NC_000008.10:g.21157576C>A, NC_000008.10:g.21157576C>T

Select item 148912308910.

rs1489123089 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTAT>- [Show Flanks]
Chromosome:: 8:21300861 (GRCh38)
8:21158372 (GRCh37)
Canonical SPDI:: NC_000008.11:21300857:TATTTAT:TAT
Gene:: LOC101929172 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: TAT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.21300861_21300864del, NC_000008.10:g.21158372_21158375del

Select item 148839148511.

rs1488391485 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:21307656 (GRCh38)
8:21165167 (GRCh37)
Canonical SPDI:: NC_000008.11:21307655:A:G
Gene:: LOC101929172 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
HGVS:: NC_000008.11:g.21307656A>G, NC_000008.10:g.21165167A>G

Select item 148825715112.

rs1488257151 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:21297075 (GRCh38)
8:21154586 (GRCh37)
Canonical SPDI:: NC_000008.11:21297074:C:T
Gene:: LOC101929172 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000008.11:g.21297075C>T, NC_000008.10:g.21154586C>T

Select item 148820497013.

rs1488204970 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 8:21296435 (GRCh38)
8:21153946 (GRCh37)
Canonical SPDI:: NC_000008.11:21296434:T:C
Gene:: LOC101929172 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.21296435T>C, NC_000008.10:g.21153946T>C

Select item 148774074414.

rs1487740744 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 8:21299323 (GRCh38)
8:21156834 (GRCh37)
Canonical SPDI:: NC_000008.11:21299322:C:G,NC_000008.11:21299322:C:T
Gene:: LOC101929172 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.21299323C>G, NC_000008.11:g.21299323C>T, NC_000008.10:g.21156834C>G, NC_000008.10:g.21156834C>T

Select item 148749042915.

rs1487490429 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:21303542 (GRCh38)
8:21161053 (GRCh37)
Canonical SPDI:: NC_000008.11:21303541:A:G
Gene:: LOC101929172 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.21303542A>G, NC_000008.10:g.21161053A>G

Select item 148728287416.

rs1487282874 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:21306708 (GRCh38)
8:21164219 (GRCh37)
Canonical SPDI:: NC_000008.11:21306707:C:T
Gene:: LOC101929172 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000008.11:g.21306708C>T, NC_000008.10:g.21164219C>T

Select item 148715643617.

rs1487156436 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:21299872 (GRCh38)
8:21157383 (GRCh37)
Canonical SPDI:: NC_000008.11:21299871:G:A
Gene:: LOC101929172 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.21299872G>A, NC_000008.10:g.21157383G>A

Select item 148708242718.

rs1487082427 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 8:21309610 (GRCh38)
8:21167121 (GRCh37)
Canonical SPDI:: NC_000008.11:21309609:G:C,NC_000008.11:21309609:G:T
Gene:: LOC101929172 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.21309610G>C, NC_000008.11:g.21309610G>T, NC_000008.10:g.21167121G>C, NC_000008.10:g.21167121G>T

Select item 148693822619.

rs1486938226 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:21305234 (GRCh38)
8:21162745 (GRCh37)
Canonical SPDI:: NC_000008.11:21305233:C:T
Gene:: LOC101929172 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000008.11:g.21305234C>T, NC_000008.10:g.21162745C>T

Select item 148690941020.

rs1486909410 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 8:21297966 (GRCh38)
8:21155477 (GRCh37)
Canonical SPDI:: NC_000008.11:21297965:C:T
Gene:: LOC101929172 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.21297966C>T, NC_000008.10:g.21155477C>T

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