SNP Links for Gene (Select 101930749) - SNP

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Links from Gene

Items: 1 to 20 of 2483

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Select item 14904301421.

rs1490430142 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,T [Show Flanks]
Chromosome:: 13:87804995 (GRCh38)
13:88457250 (GRCh37)
Canonical SPDI:: NC_000013.11:87804994:C:A,NC_000013.11:87804994:C:T
Gene:: LINC00397 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.87804995C>A, NC_000013.11:g.87804995C>T, NC_000013.10:g.88457250C>A, NC_000013.10:g.88457250C>T

Select item 14904268092.

rs1490426809 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 13:87803578 (GRCh38)
13:88455833 (GRCh37)
Canonical SPDI:: NC_000013.11:87803577:T:C
Gene:: LINC00397 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000013.11:g.87803578T>C, NC_000013.10:g.88455833T>C

Select item 14904110803.

rs1490411080 [Homo sapiens]

Variant type:: DEL
Alleles:: A>- [Show Flanks]
Chromosome:: 13:87801395 (GRCh38)
13:88453650 (GRCh37)
Canonical SPDI:: NC_000013.11:87801394:A:
Gene:: LINC00397 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000007/1 (GnomAD)
-=0.000008/2 (TOPMED)
HGVS:: NC_000013.11:g.87801395del, NC_000013.10:g.88453650del

Select item 14899372464.

rs1489937246 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 13:87804449 (GRCh38)
13:88456704 (GRCh37)
Canonical SPDI:: NC_000013.11:87804448:T:C
Gene:: LINC00397 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000013.11:g.87804449T>C, NC_000013.10:g.88456704T>C

Select item 14897196025.

rs1489719602 [Homo sapiens]

Variant type:: DEL
Alleles:: TT>- [Show Flanks]
Chromosome:: 13:87807411 (GRCh38)
13:88459666 (GRCh37)
Canonical SPDI:: NC_000013.11:87807410:TT:
Gene:: LINC00397 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: -=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000071/2 (TOMMO)
HGVS:: NC_000013.11:g.87807411_87807412del, NC_000013.10:g.88459666_88459667del

Select item 14893155486.

rs1489315548 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 13:87803227 (GRCh38)
13:88455482 (GRCh37)
Canonical SPDI:: NC_000013.11:87803226:T:C
Gene:: LINC00397 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.87803227T>C, NC_000013.10:g.88455482T>C

Select item 14890792437.

rs1489079243 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:87812085 (GRCh38)
13:88464340 (GRCh37)
Canonical SPDI:: NC_000013.11:87812084:A:G
Gene:: LINC00397 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000008/2 (TOPMED)
G=0.000212/4 (TOMMO)
HGVS:: NC_000013.11:g.87812085A>G, NC_000013.10:g.88464340A>G

Select item 14888227298.

rs1488822729 [Homo sapiens]

Variant type:: DELINS
Alleles:: T>- [Show Flanks]
Chromosome:: 13:87802847 (GRCh38)
13:88455102 (GRCh37)
Canonical SPDI:: NC_000013.11:87802846:TT:T
Gene:: LINC00397 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
-=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.87802848del, NC_000013.10:g.88455103del

Select item 14885376129.

rs1488537612 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 13:87806560 (GRCh38)
13:88458815 (GRCh37)
Canonical SPDI:: NC_000013.11:87806559:C:A
Gene:: LINC00397 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.87806560C>A, NC_000013.10:g.88458815C>A

Select item 148783951510.

rs1487839515 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:87810724 (GRCh38)
13:88462979 (GRCh37)
Canonical SPDI:: NC_000013.11:87810723:A:G
Gene:: LINC00397 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
HGVS:: NC_000013.11:g.87810724A>G, NC_000013.10:g.88462979A>G

Select item 148775538111.

rs1487755381 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 13:87806761 (GRCh38)
13:88459016 (GRCh37)
Canonical SPDI:: NC_000013.11:87806760:T:C
Gene:: LINC00397 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.87806761T>C, NC_000013.10:g.88459016T>C

Select item 148761616912.

rs1487616169 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 13:87810406 (GRCh38)
13:88462661 (GRCh37)
Canonical SPDI:: NC_000013.11:87810405:C:T
Gene:: LINC00397 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000013.11:g.87810406C>T, NC_000013.10:g.88462661C>T

Select item 148735317413.

rs1487353174 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 13:87802398 (GRCh38)
13:88454653 (GRCh37)
Canonical SPDI:: NC_000013.11:87802397:G:C
Gene:: LINC00397 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.87802398G>C, NC_000013.10:g.88454653G>C

Select item 148713195414.

rs1487131954 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:87802983 (GRCh38)
13:88455238 (GRCh37)
Canonical SPDI:: NC_000013.11:87802982:A:G
Gene:: LINC00397 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.87802983A>G, NC_000013.10:g.88455238A>G

Select item 148650188915.

rs1486501889 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 13:87801981 (GRCh38)
13:88454236 (GRCh37)
Canonical SPDI:: NC_000013.11:87801980:A:C
Gene:: LINC00397 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000013.11:g.87801981A>C, NC_000013.10:g.88454236A>C

Select item 148578840116.

rs1485788401 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 13:87805722 (GRCh38)
13:88457977 (GRCh37)
Canonical SPDI:: NC_000013.11:87805721:A:C
Gene:: LINC00397 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.87805722A>C, NC_000013.10:g.88457977A>C

Select item 148541065917.

rs1485410659 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 13:87808377 (GRCh38)
13:88460632 (GRCh37)
Canonical SPDI:: NC_000013.11:87808376:T:C
Gene:: LINC00397 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000013.11:g.87808377T>C, NC_000013.10:g.88460632T>C

Select item 148467890018.

rs1484678900 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 13:87808905 (GRCh38)
13:88461160 (GRCh37)
Canonical SPDI:: NC_000013.11:87808904:G:C
Gene:: LINC00397 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000013.11:g.87808905G>C, NC_000013.10:g.88461160G>C

Select item 148437286619.

rs1484372866 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 13:87811841 (GRCh38)
13:88464096 (GRCh37)
Canonical SPDI:: NC_000013.11:87811840:A:G
Gene:: LINC00397 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000013.11:g.87811841A>G, NC_000013.10:g.88464096A>G

Select item 148413120620.

rs1484131206 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 13:87804160 (GRCh38)
13:88456415 (GRCh37)
Canonical SPDI:: NC_000013.11:87804159:G:A,NC_000013.11:87804159:G:C
Gene:: LINC00397 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
HGVS:: NC_000013.11:g.87804160G>A, NC_000013.11:g.87804160G>C, NC_000013.10:g.88456415G>A, NC_000013.10:g.88456415G>C