SNP Links for Gene (Select 101954276) - SNP

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Select item 14914457221.

rs1491445722 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->TT [Show Flanks]
Chromosome:: 1:146052799 (GRCh38)
1:145382200 (GRCh37)
Canonical SPDI:: NC_000001.11:146052799:T:TTT
Gene:: LINC01719 (Varview), RNVU1-6 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: TTT=0./0 (ALFA)
TT=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.146052800_146052801insTT, NW_003871055.3:g.2868213_2868214insTT, NC_000001.10:g.145382200_145382201insAA, NT_187369.1:g.9449_9450insAA, NR_125967.1:n.205_206insTT, NR_125968.1:n.205_206insTT

Select item 14912094502.

rs1491209450 has merged into rs1553774887 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>TTT [Show Flanks]
Chromosome:: 1:146053074 (GRCh38)
1:145381930 (GRCh37)
Canonical SPDI:: NC_000001.11:146053073:G:TTT
Gene:: LINC01719 (Varview), RNVU1-6 (Varview)
Functional Consequence:: intron_variant,2KB_upstream_variant,upstream_transcript_variant
Validated:: by cluster
HGVS:: NC_000001.11:g.146053074delinsTTT, NW_003871055.3:g.2868487delinsTTT, NC_000001.10:g.145381930A>C, NC_000001.10:g.145381938_145381939dup, NT_187369.1:g.9192A>C, NT_187369.1:g.9209_9210dup

Select item 14911651663.

rs1491165166 has merged into rs199545193 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATATATATATATATATATATATATAT>-,AT,ATAT,ATATAT,ATATATAT,ATATATATAT,ATATATATATAT,ATATATATATATAT,ATATATATATATATAT,ATATATATATATATATAT,ATATATATATATATATATAT,ATATATATATATATATATATAT,ATATATATATATATATATATATAT,ATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATATAT,ATATATATATATATATATATATATATATATATATATATATATATATAT [Show Flanks]
Chromosome:: 1:146052811 (GRCh38)
1:145382180 (GRCh37)
Canonical SPDI:: NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATAT,NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATATAT,NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATATATAT,NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATAT,NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATAT,NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATAT,NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATAT,NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATAT,NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATAT,NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATAT,NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATAT,NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATAT,NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATAT,NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATAT,NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATAT,NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATATAT,NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATATATAT,NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATATATATAT,NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATATATATATAT,NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATATATATATATAT,NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATATATATATATATAT,NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATATATATATATATATAT,NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT,NC_000001.11:146052798:ATATATATATATATATATATATATATATATATATATAT:ATATATATATATATATATATATATATATATATATATATATATATATATATATATATATAT
Gene:: LINC01719 (Varview), RNVU1-6 (Varview)
Functional Consequence:: 2KB_upstream_variant,non_coding_transcript_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ATATATATATAT=0./0 (ALFA)
HGVS:: NC_000001.11:g.146052799AT[6], NC_000001.11:g.146052799AT[7], NC_000001.11:g.146052799AT[8], NC_000001.11:g.146052799AT[9], NC_000001.11:g.146052799AT[10], NC_000001.11:g.146052799AT[11], NC_000001.11:g.146052799AT[12], NC_000001.11:g.146052799AT[13], NC_000001.11:g.146052799AT[14], NC_000001.11:g.146052799AT[15], NC_000001.11:g.146052799AT[16], NC_000001.11:g.146052799AT[17], NC_000001.11:g.146052799AT[18], NC_000001.11:g.146052799AT[20], NC_000001.11:g.146052799AT[21], NC_000001.11:g.146052799AT[22], NC_000001.11:g.146052799AT[23], NC_000001.11:g.146052799AT[24], NC_000001.11:g.146052799AT[25], NC_000001.11:g.146052799AT[26], NC_000001.11:g.146052799AT[27], NC_000001.11:g.146052799AT[28], NC_000001.11:g.146052799AT[29], NC_000001.11:g.146052799AT[30], NW_003871055.3:g.2868212AT[6], NW_003871055.3:g.2868212AT[7], NW_003871055.3:g.2868212AT[8], NW_003871055.3:g.2868212AT[9], NW_003871055.3:g.2868212AT[10], NW_003871055.3:g.2868212AT[11], NW_003871055.3:g.2868212AT[12], NW_003871055.3:g.2868212AT[13], NW_003871055.3:g.2868212AT[14], NW_003871055.3:g.2868212AT[15], NW_003871055.3:g.2868212AT[16], NW_003871055.3:g.2868212AT[17], NW_003871055.3:g.2868212AT[18], NW_003871055.3:g.2868212AT[20], NW_003871055.3:g.2868212AT[21], NW_003871055.3:g.2868212AT[22], NW_003871055.3:g.2868212AT[23], NW_003871055.3:g.2868212AT[24], NW_003871055.3:g.2868212AT[25], NW_003871055.3:g.2868212AT[26], NW_003871055.3:g.2868212AT[27], NW_003871055.3:g.2868212AT[28], NW_003871055.3:g.2868212AT[29], NW_003871055.3:g.2868212AT[30], NC_000001.10:g.145382168AT[19], NC_000001.10:g.145382168AT[6], NC_000001.10:g.145382168AT[7], NC_000001.10:g.145382168AT[8], NC_000001.10:g.145382168AT[9], NC_000001.10:g.145382168AT[10], NC_000001.10:g.145382168AT[11], NC_000001.10:g.145382168AT[12], NC_000001.10:g.145382168AT[13], NC_000001.10:g.145382168AT[14], NC_000001.10:g.145382168AT[15], NC_000001.10:g.145382168AT[16], NC_000001.10:g.145382168AT[18], NC_000001.10:g.145382168AT[20], NC_000001.10:g.145382168AT[21], NC_000001.10:g.145382168AT[22], NC_000001.10:g.145382168AT[23], NC_000001.10:g.145382168AT[24], NC_000001.10:g.145382168AT[25], NC_000001.10:g.145382168AT[26], NC_000001.10:g.145382168AT[27], NC_000001.10:g.145382168AT[28], NC_000001.10:g.145382168AT[29], NC_000001.10:g.145382168AT[30], NR_125967.1:n.204AT[6], NR_125967.1:n.204AT[7], NR_125967.1:n.204AT[8], NR_125967.1:n.204AT[9], NR_125967.1:n.204AT[10], NR_125967.1:n.204AT[11], NR_125967.1:n.204AT[12], NR_125967.1:n.204AT[13], NR_125967.1:n.204AT[14], NR_125967.1:n.204AT[15], NR_125967.1:n.204AT[16], NR_125967.1:n.204AT[17], NR_125967.1:n.204AT[18], NR_125967.1:n.204AT[20], NR_125967.1:n.204AT[21], NR_125967.1:n.204AT[22], NR_125967.1:n.204AT[23], NR_125967.1:n.204AT[24], NR_125967.1:n.204AT[25], NR_125967.1:n.204AT[26], NR_125967.1:n.204AT[27], NR_125967.1:n.204AT[28], NR_125967.1:n.204AT[29], NR_125967.1:n.204AT[30], NR_125968.1:n.204AT[6], NR_125968.1:n.204AT[7], NR_125968.1:n.204AT[8], NR_125968.1:n.204AT[9], NR_125968.1:n.204AT[10], NR_125968.1:n.204AT[11], NR_125968.1:n.204AT[12], NR_125968.1:n.204AT[13], NR_125968.1:n.204AT[14], NR_125968.1:n.204AT[15], NR_125968.1:n.204AT[16], NR_125968.1:n.204AT[17], NR_125968.1:n.204AT[18], NR_125968.1:n.204AT[20], NR_125968.1:n.204AT[21], NR_125968.1:n.204AT[22], NR_125968.1:n.204AT[23], NR_125968.1:n.204AT[24], NR_125968.1:n.204AT[25], NR_125968.1:n.204AT[26], NR_125968.1:n.204AT[27], NR_125968.1:n.204AT[28], NR_125968.1:n.204AT[29], NR_125968.1:n.204AT[30], NT_187369.1:g.9435AT[19], NT_187369.1:g.9435AT[6], NT_187369.1:g.9435AT[7], NT_187369.1:g.9435AT[9], NT_187369.1:g.9435AT[10], NT_187369.1:g.9435AT[11], NT_187369.1:g.9435AT[12], NT_187369.1:g.9435AT[13], NT_187369.1:g.9435AT[14], NT_187369.1:g.9435AT[15], NT_187369.1:g.9435AT[16], NT_187369.1:g.9435AT[17], NT_187369.1:g.9435AT[18], NT_187369.1:g.9435AT[20], NT_187369.1:g.9435AT[21], NT_187369.1:g.9435AT[22], NT_187369.1:g.9435AT[23], NT_187369.1:g.9435AT[24], NT_187369.1:g.9435AT[25], NT_187369.1:g.9435AT[26], NT_187369.1:g.9435AT[27], NT_187369.1:g.9435AT[28], NT_187369.1:g.9435AT[29], NT_187369.1:g.9435AT[30]

Select item 14910849414.

rs1491084941 [Homo sapiens]

Variant type:: DELINS
Alleles:: GT>- [Show Flanks]
Chromosome:: 1:146052837 (GRCh38)
1:145382169 (GRCh37)
Canonical SPDI:: NC_000001.11:146052835:TGT:T
Gene:: LINC01719 (Varview), RNVU1-6 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.01998/237 (ALFA)
-=0.00517/629 (GnomAD)
-=0.007238/13 (Korea1K)
-=0.013882/392 (TOMMO)
HGVS:: NC_000001.11:g.146052837_146052838del, NW_003871055.3:g.2868250_2868251del, NC_000001.10:g.145382168dup, NC_000001.10:g.145382167del, NR_125967.1:n.242_243del, NR_125968.1:n.242_243del

Select item 14907520685.

rs1490752068 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:146052756 (GRCh38)
1:145382244 (GRCh37)
Canonical SPDI:: NC_000001.11:146052755:C:T
Gene:: LINC01719 (Varview), RNVU1-6 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000001.11:g.146052756C>T, NW_003871055.3:g.2868169C>T, NC_000001.10:g.145382244G>A, NT_187369.1:g.9493G>A, NR_125967.1:n.161C>T, NR_125968.1:n.161C>T

Select item 14905901366.

rs1490590136 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:146052558 (GRCh38)
1:145382442 (GRCh37)
Canonical SPDI:: NC_000001.11:146052557:G:C
Gene:: LINC01719 (Varview), RNVU1-6 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000001.11:g.146052558G>C, NW_003871055.3:g.2867971G>C, NC_000001.10:g.145382442C>G, NT_187369.1:g.9691C>G

Select item 14905373337.

rs1490537333 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->ATATATATATATATATCCAACTATCCTAAAAGACACTGCCCTTCATCATTCCATGCCGTTAGACATTT,ATATATATCT,ATATATCT,ATATCT,ATCT,GT [Show Flanks]
Chromosome:: 1:146052839 (GRCh38)
1:145382164 (GRCh37)
Canonical SPDI:: NC_000001.11:146052839:T:TATATATATATATATATCCAACTATCCTAAAAGACACTGCCCTTCATCATTCCATGCCGTTAGACATTT,NC_000001.11:146052839:T:TATATATATCT,NC_000001.11:146052839:T:TATATATCT,NC_000001.11:146052839:T:TATATCT,NC_000001.11:146052839:T:TATCT,NC_000001.11:146052839:T:TGT
Gene:: LINC01719 (Varview), RNVU1-6 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TATCT=0./0 (ALFA)
HGVS:: NC_000001.11:g.146052840TA[8]TCCAACTATCCTAAAAGACACTGCCCTTCATCATTCCATGCCGTTAGACATTT[1], NC_000001.11:g.146052840TA[4]TCT[1], NC_000001.11:g.146052840TA[3]TCT[1], NC_000001.11:g.146052840TA[2]TCT[1], NC_000001.11:g.146052840_146052841insATCT, NC_000001.11:g.146052840_146052841insGT, NW_003871055.3:g.2868253TA[8]TCCAACTATCCTAAAAGACACTGCCCTTCATCATTCCATGCCGTTAGACATTT[1], NW_003871055.3:g.2868253TA[4]TCT[1], NW_003871055.3:g.2868253TA[3]TCT[1], NW_003871055.3:g.2868253TA[2]TCT[1], NW_003871055.3:g.2868253_2868254insATCT, NW_003871055.3:g.2868253_2868254insGT, NC_000001.10:g.145382164_145382165insAATGTCTAACGGCATGGAATGATGAAGGGCAGTGTCTTTTAGGATAGTTGGATATATATATATATATA, NC_000001.10:g.145382164_145382165insGATATATATA, NC_000001.10:g.145382164_145382165insGATATATA, NC_000001.10:g.145382164_145382165insGATATA, NC_000001.10:g.145382164_145382165insGATA, NC_000001.10:g.145382164_145382165insCA, NR_125967.1:n.245TA[8]TCCAACTATCCTAAAAGACACTGCCCTTCATCATTCCATGCCGTTAGACATTT[1], NR_125967.1:n.245TA[4]TCT[1], NR_125967.1:n.245TA[3]TCT[1], NR_125967.1:n.245TA[2]TCT[1], NR_125967.1:n.245_246insATCT, NR_125967.1:n.245_246insGT, NR_125968.1:n.245TA[8]TCCAACTATCCTAAAAGACACTGCCCTTCATCATTCCATGCCGTTAGACATTT[1], NR_125968.1:n.245TA[4]TCT[1], NR_125968.1:n.245TA[3]TCT[1], NR_125968.1:n.245TA[2]TCT[1], NR_125968.1:n.245_246insATCT, NR_125968.1:n.245_246insGT

Select item 14902131538.

rs1490213153 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:146053321 (GRCh38)
1:145381682 (GRCh37)
Canonical SPDI:: NC_000001.11:146053320:A:G
Gene:: LINC01719 (Varview), RNVU1-6 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0.000071/1 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.146053321A>G, NW_003871055.3:g.2868734A>G, NC_000001.10:g.145381682T>C, NT_187369.1:g.8944T>C

Select item 14901462049.

rs1490146204 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:146054104 (GRCh38)
1:145380899 (GRCh37)
Canonical SPDI:: NC_000001.11:146054103:T:G
Gene:: LINC01719 (Varview), RNVU1-6 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000015/4 (TOPMED)
G=0.000029/4 (GnomAD)
HGVS:: NC_000001.11:g.146054104T>G, NW_003871055.3:g.2869517T>G, NC_000001.10:g.145380899A>C, NT_187369.1:g.8164A>C

Select item 148941482110.

rs1489414821 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:146052301 (GRCh38)
1:145382699 (GRCh37)
Canonical SPDI:: NC_000001.11:146052300:C:T
Gene:: LINC01719 (Varview), RNVU1-6 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000036/5 (GnomAD)
T=0.000076/20 (TOPMED)
HGVS:: NC_000001.11:g.146052301C>T, NW_003871055.3:g.2867714C>T, NC_000001.10:g.145382699G>A

Select item 148931261111.

rs1489312611 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 1:146052562 (GRCh38)
1:145382438 (GRCh37)
Canonical SPDI:: NC_000001.11:146052561:G:C,NC_000001.11:146052561:G:T
Gene:: LINC01719 (Varview), RNVU1-6 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.000083/22 (TOPMED)
HGVS:: NC_000001.11:g.146052562G>C, NC_000001.11:g.146052562G>T, NW_003871055.3:g.2867975G>C, NW_003871055.3:g.2867975G>T, NC_000001.10:g.145382438C>G, NC_000001.10:g.145382438C>A, NT_187369.1:g.9687C>G, NT_187369.1:g.9687C>A

Select item 148930417112.

rs1489304171 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:146052137 (GRCh38)
1:145382864 (GRCh37)
Canonical SPDI:: NC_000001.11:146052136:C:T
Gene:: LINC01719 (Varview), RNVU1-6 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.146052137C>T, NW_003871055.3:g.2867550C>T, NC_000001.10:g.145382864G>A, NR_104085.1:n.108G>A

Select item 148925491713.

rs1489254917 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 1:146052384 (GRCh38)
1:145382616 (GRCh37)
Canonical SPDI:: NC_000001.11:146052383:G:A,NC_000001.11:146052383:G:C
Gene:: LINC01719 (Varview), RNVU1-6 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/1 (GnomAD)
C=0.000035/1 (TOMMO)
HGVS:: NC_000001.11:g.146052384G>A, NC_000001.11:g.146052384G>C, NW_003871055.3:g.2867797G>A, NW_003871055.3:g.2867797G>C, NC_000001.10:g.145382616C>T, NC_000001.10:g.145382616C>G, NT_187369.1:g.9850C>T, NT_187369.1:g.9850C>G

Select item 148818056114.

rs1488180561 [Homo sapiens]

Variant type:: DELINS
Alleles:: ATGTAT>- [Show Flanks]
Chromosome:: 1:146052835 (GRCh38)
1:145382171 (GRCh37)
Canonical SPDI:: NC_000001.11:146052831:TATATGTAT:TAT
Gene:: LINC01719 (Varview), RNVU1-6 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TAT=0.00059/7 (ALFA)
-=0.00039/11 (TOMMO)
-=0.0011/2 (Korea1K)
HGVS:: NC_000001.11:g.146052835_146052840del, NW_003871055.3:g.2868248_2868253del, NC_000001.10:g.145382168AT[19], NC_000001.10:g.145382167_145382168del, NR_125967.1:n.240_245del, NR_125968.1:n.240_245del

Select item 148783218415.

rs1487832184 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:146053738 (GRCh38)
1:145381265 (GRCh37)
Canonical SPDI:: NC_000001.11:146053737:C:A
Gene:: LINC01719 (Varview), RNVU1-6 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000337/4 (ALFA)
A=0.000152/21 (GnomAD)
A=0.000234/62 (TOPMED)
A=0.004216/27 (1000Genomes)
HGVS:: NC_000001.11:g.146053738C>A, NW_003871055.3:g.2869151C>A, NC_000001.10:g.145381265G>T, NT_187369.1:g.8527G>T

Select item 148702476816.

rs1487024768 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:146052761 (GRCh38)
1:145382239 (GRCh37)
Canonical SPDI:: NC_000001.11:146052760:T:G
Gene:: LINC01719 (Varview), RNVU1-6 (Varview)
Functional Consequence:: non_coding_transcript_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000019/5 (TOPMED)
G=0.000043/6 (GnomAD)
HGVS:: NC_000001.11:g.146052761T>G, NW_003871055.3:g.2868174T>G, NC_000001.10:g.145382239A>C, NT_187369.1:g.9488A>C, NR_125967.1:n.166T>G, NR_125968.1:n.166T>G

Select item 148586104317.

rs1485861043 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:146053140 (GRCh38)
1:145381863 (GRCh37)
Canonical SPDI:: NC_000001.11:146053139:C:A
Gene:: LINC01719 (Varview), RNVU1-6 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.146053140C>A, NW_003871055.3:g.2868553C>A, NC_000001.10:g.145381863G>T, NT_187369.1:g.9125G>T

Select item 148572954218.

rs1485729542 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:146053823 (GRCh38)
1:145381180 (GRCh37)
Canonical SPDI:: NC_000001.11:146053822:A:G
Gene:: LINC01719 (Varview), RNVU1-6 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000143/20 (GnomAD)
G=0.000156/1 (1000Genomes)
G=0.000196/52 (TOPMED)
HGVS:: NC_000001.11:g.146053823A>G, NW_003871055.3:g.2869236A>G, NC_000001.10:g.145381180T>C, NT_187369.1:g.8442T>C

Select item 148513312119.

rs1485133121 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:146051754 (GRCh38)
1:145383247 (GRCh37)
Canonical SPDI:: NC_000001.11:146051753:A:C
Gene:: LINC01719 (Varview), RNVU1-6 (Varview)
Functional Consequence:: 500B_downstream_variant,upstream_transcript_variant,downstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0./0 (GnomAD)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.146051754A>C, NW_003871055.3:g.2867167A>C, NC_000001.10:g.145383247T>G

Select item 148483867620.

rs1484838676 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:146052071 (GRCh38)
1:145382930 (GRCh37)
Canonical SPDI:: NC_000001.11:146052070:G:A
Gene:: LINC01719 (Varview), RNVU1-6 (Varview)
Functional Consequence:: 500B_downstream_variant,upstream_transcript_variant,downstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.146052071G>A, NW_003871055.3:g.2867484G>A, NC_000001.10:g.145382930C>T

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