Links from Gene
Items: 1 to 20 of 3984
1.
rs1491519461 has merged into rs5855114 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAA>-,A,AA,AAAA,AAAAA
[Show Flanks]
- Chromosome:
- 3:186813622
(GRCh38)
3:186531411
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186813607:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000003.12:186813607:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000003.12:186813607:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000003.12:186813607:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000003.12:186813607:AAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA
- Gene:
- LINC02043 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AAAAAAAAAAAAAAAAAAA=0./0
(
ALFA)
-=0.3498/1752
(1000Genomes)
- HGVS:
2.
rs1491505798 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- CA>-
[Show Flanks]
- Chromosome:
- 3:186815007
(GRCh38)
3:186532796
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186815006:CA:
- Gene:
- LINC02043 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0.0011/13
(
ALFA)
-=0.00011/5
(GnomAD)
-=0.00109/30
(TOMMO)
- HGVS:
3.
rs1491287951 has merged into rs72194232 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CC>-,C,CCC,CCCC,CCCCCCC,CCCCCCCC,CCCCCCCCC,CCCCCCCCCC,CCCCCCCCCCC,CCCCCCCCCCCC,CCCCCCCCCCCCC,CCCCCCCCCCCCCC,CCCCCCCCCCCCCCC,CCCCCCCCCCCCCCCC,CCCCCCCCCCCCCCCCC,CCCCCCCCCCCCCCCCCC,CCCCCCCCCCCCCCCCCCC,CCCCCCCCCCCCCCCCCCCC,CCCCCCCCCCCCCCCCCCCCC,CCCCCCCCCCCCCCCCCCCCCC,CCCCCCCCCCCCCCCCCCCCCCC,CCCCCCCCCCCCCCCCCCCCCCCC,CCCCCCCCCCCCCCCCCCCCCCCCC,CCCCCCCCCCCCCCCCCCCCCCCCCC,CCCCCCCCCCCCCCCCCCCCCCCCCCCC,CCCCCCCCCCCCCCCCCCCCCCCCCCCCC,CCCCCCCCCCCTCCCCCCCCCCC,CCCCCCCCCCTCCCCCCCCCCC,CCCCCCCCCTCCCCCCCCCCC,CCCCCCCCTCCCCCCCCCCC
[Show Flanks]
- Chromosome:
- 3:186827012
(GRCh38)
3:186544801
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCCCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCCCCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCCCCTCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCCCTCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCCTCCCCCCCCCCC,NC_000003.12:186827003:CCCCCCCCCC:CCCCCCCCCCCCCCCCTCCCCCCCCCCC
- Gene:
- LINC02043 (Varview)
- Functional Consequence:
- upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
CCCCCCCCCCCCCCCCCC=0.0007/6
(
ALFA)
-=0.0234/90
(ALSPAC)
C=0.4449/2228
(1000Genomes)
- HGVS:
NC_000003.12:g.186827012_186827013del, NC_000003.12:g.186827013del, NC_000003.12:g.186827013dup, NC_000003.12:g.186827012_186827013dup, NC_000003.12:g.186827009_186827013dup, NC_000003.12:g.186827008_186827013dup, NC_000003.12:g.186827007_186827013dup, NC_000003.12:g.186827006_186827013dup, NC_000003.12:g.186827005_186827013dup, NC_000003.12:g.186827004_186827013dup, NC_000003.12:g.186827013_186827014insCCCCCCCCCCC, NC_000003.12:g.186827013_186827014insCCCCCCCCCCCC, NC_000003.12:g.186827013_186827014insCCCCCCCCCCCCC, NC_000003.12:g.186827013_186827014insCCCCCCCCCCCCCC, NC_000003.12:g.186827013_186827014insCCCCCCCCCCCCCCC, NC_000003.12:g.186827013_186827014insCCCCCCCCCCCCCCCC, NC_000003.12:g.186827013_186827014insCCCCCCCCCCCCCCCCC, NC_000003.12:g.186827013_186827014insCCCCCCCCCCCCCCCCCC, NC_000003.12:g.186827013_186827014insCCCCCCCCCCCCCCCCCCC, NC_000003.12:g.186827013_186827014insCCCCCCCCCCCCCCCCCCCC, NC_000003.12:g.186827013_186827014insCCCCCCCCCCCCCCCCCCCCC, NC_000003.12:g.186827013_186827014insCCCCCCCCCCCCCCCCCCCCCC, NC_000003.12:g.186827013_186827014insCCCCCCCCCCCCCCCCCCCCCCC, NC_000003.12:g.186827013_186827014insCCCCCCCCCCCCCCCCCCCCCCCC, NC_000003.12:g.186827013_186827014insCCCCCCCCCCCCCCCCCCCCCCCCCC, NC_000003.12:g.186827013_186827014insCCCCCCCCCCCCCCCCCCCCCCCCCCC, NC_000003.12:g.186827004_186827013C[19]TCCCCCCCCCCC[1], NC_000003.12:g.186827004_186827013C[18]TCCCCCCCCCCC[1], NC_000003.12:g.186827004_186827013C[17]TCCCCCCCCCCC[1], NC_000003.12:g.186827004_186827013C[16]TCCCCCCCCCCC[1], NC_000003.11:g.186544801_186544802del, NC_000003.11:g.186544802del, NC_000003.11:g.186544802dup, NC_000003.11:g.186544801_186544802dup, NC_000003.11:g.186544798_186544802dup, NC_000003.11:g.186544797_186544802dup, NC_000003.11:g.186544796_186544802dup, NC_000003.11:g.186544795_186544802dup, NC_000003.11:g.186544794_186544802dup, NC_000003.11:g.186544793_186544802dup, NC_000003.11:g.186544802_186544803insCCCCCCCCCCC, NC_000003.11:g.186544802_186544803insCCCCCCCCCCCC, NC_000003.11:g.186544802_186544803insCCCCCCCCCCCCC, NC_000003.11:g.186544802_186544803insCCCCCCCCCCCCCC, NC_000003.11:g.186544802_186544803insCCCCCCCCCCCCCCC, NC_000003.11:g.186544802_186544803insCCCCCCCCCCCCCCCC, NC_000003.11:g.186544802_186544803insCCCCCCCCCCCCCCCCC, NC_000003.11:g.186544802_186544803insCCCCCCCCCCCCCCCCCC, NC_000003.11:g.186544802_186544803insCCCCCCCCCCCCCCCCCCC, NC_000003.11:g.186544802_186544803insCCCCCCCCCCCCCCCCCCCC, NC_000003.11:g.186544802_186544803insCCCCCCCCCCCCCCCCCCCCC, NC_000003.11:g.186544802_186544803insCCCCCCCCCCCCCCCCCCCCCC, NC_000003.11:g.186544802_186544803insCCCCCCCCCCCCCCCCCCCCCCC, NC_000003.11:g.186544802_186544803insCCCCCCCCCCCCCCCCCCCCCCCC, NC_000003.11:g.186544802_186544803insCCCCCCCCCCCCCCCCCCCCCCCCCC, NC_000003.11:g.186544802_186544803insCCCCCCCCCCCCCCCCCCCCCCCCCCC, NC_000003.11:g.186544793_186544802C[19]TCCCCCCCCCCC[1], NC_000003.11:g.186544793_186544802C[18]TCCCCCCCCCCC[1], NC_000003.11:g.186544793_186544802C[17]TCCCCCCCCCCC[1], NC_000003.11:g.186544793_186544802C[16]TCCCCCCCCCCC[1]
4.
rs1491285002 has merged into rs33983048 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAAAAAAA>-,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 3:186815017
(GRCh38)
3:186532806
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186815007:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAA,NC_000003.12:186815007:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000003.12:186815007:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000003.12:186815007:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000003.12:186815007:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000003.12:186815007:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000003.12:186815007:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000003.12:186815007:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000003.12:186815007:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000003.12:186815007:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000003.12:186815007:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:186815007:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:186815007:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:186815007:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:186815007:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:186815007:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:186815007:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000003.12:186815007:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- LINC02043 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000003.12:g.186815017_186815030del, NC_000003.12:g.186815021_186815030del, NC_000003.12:g.186815022_186815030del, NC_000003.12:g.186815023_186815030del, NC_000003.12:g.186815024_186815030del, NC_000003.12:g.186815025_186815030del, NC_000003.12:g.186815026_186815030del, NC_000003.12:g.186815027_186815030del, NC_000003.12:g.186815028_186815030del, NC_000003.12:g.186815029_186815030del, NC_000003.12:g.186815030del, NC_000003.12:g.186815030dup, NC_000003.12:g.186815029_186815030dup, NC_000003.12:g.186815028_186815030dup, NC_000003.12:g.186815027_186815030dup, NC_000003.12:g.186815026_186815030dup, NC_000003.12:g.186815023_186815030dup, NC_000003.12:g.186815012_186815030dup, NC_000003.11:g.186532806_186532819del, NC_000003.11:g.186532810_186532819del, NC_000003.11:g.186532811_186532819del, NC_000003.11:g.186532812_186532819del, NC_000003.11:g.186532813_186532819del, NC_000003.11:g.186532814_186532819del, NC_000003.11:g.186532815_186532819del, NC_000003.11:g.186532816_186532819del, NC_000003.11:g.186532817_186532819del, NC_000003.11:g.186532818_186532819del, NC_000003.11:g.186532819del, NC_000003.11:g.186532819dup, NC_000003.11:g.186532818_186532819dup, NC_000003.11:g.186532817_186532819dup, NC_000003.11:g.186532816_186532819dup, NC_000003.11:g.186532815_186532819dup, NC_000003.11:g.186532812_186532819dup, NC_000003.11:g.186532801_186532819dup
5.
rs1491188069 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- TC>-
[Show Flanks]
- Chromosome:
- 3:186827003
(GRCh38)
3:186544792
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186827002:TC:
- Gene:
- LINC02043 (Varview)
- Functional Consequence:
- upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0./0
(
ALFA)
-=0.00002/2
(GnomAD)
- HGVS:
8.
rs1490848127 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C,G
[Show Flanks]
- Chromosome:
- 3:186819485
(GRCh38)
3:186537274
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186819484:T:C,NC_000003.12:186819484:T:G
- Gene:
- LINC02043 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
C=0.000007/1
(GnomAD)
C=0.000071/1
(TOMMO)
- HGVS:
9.
rs1490821159 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A
[Show Flanks]
- Chromosome:
- 3:186819358
(GRCh38)
3:186537147
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186819357:C:A
- Gene:
- LINC02043 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0.000071/1
(
ALFA)
A=0.000014/2
(GnomAD)
A=0.000015/4
(TOPMED)
- HGVS:
10.
rs1490660804 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GAG>-
[Show Flanks]
- Chromosome:
- 3:186818148
(GRCh38)
3:186535937
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186818144:GAGGAG:GAG
- Gene:
- LINC02043 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
GAGGAG=0.000071/1
(
ALFA)
-=0.000043/6
(GnomAD)
-=0.000083/22
(TOPMED)
- HGVS:
11.
rs1490563811 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G,T
[Show Flanks]
- Chromosome:
- 3:186827234
(GRCh38)
3:186545023
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186827233:A:G,NC_000003.12:186827233:A:T
- Gene:
- LINC02043 (Varview)
- Functional Consequence:
- upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000008/2
(TOPMED)
- HGVS:
12.
rs1490414345 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>C
[Show Flanks]
- Chromosome:
- 3:186818903
(GRCh38)
3:186536692
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186818902:G:C
- Gene:
- LINC02043 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
- HGVS:
13.
rs1490342727 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 3:186812798
(GRCh38)
3:186530587
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186812797:G:A
- Gene:
- LINC02043 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000007/1
(GnomAD)
- HGVS:
15.
rs1489749779 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 3:186820697
(GRCh38)
3:186538486
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186820696:G:A
- Gene:
- LINC02043 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
A=0./0
(
ALFA)
A=0.000004/1
(TOPMED)
A=0.000007/1
(GnomAD)
- HGVS:
16.
rs1489664591 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->TACA
[Show Flanks]
- Chromosome:
- 3:186814874
(GRCh38)
3:186532664
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186814874:CATACA:CATACATACA
- Gene:
- LINC02043 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
CATACATACA=0./0
(
ALFA)
CATA=0.000023/6
(TOPMED)
CATA=0.000029/4
(GnomAD)
- HGVS:
17.
rs1489393550 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 3:186811915
(GRCh38)
3:186529704
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186811914:C:T
- Gene:
- LINC02043 (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0.000122/2
(
ALFA)
T=0.000007/1
(GnomAD)
T=0.000023/6
(TOPMED)
- HGVS:
18.
rs1488408724 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>T
[Show Flanks]
- Chromosome:
- 3:186825962
(GRCh38)
3:186543751
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186825961:C:T
- Gene:
- LINC02043 (Varview)
- Functional Consequence:
- upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0./0
(
ALFA)
T=0.000007/1
(GnomAD)
T=0.000011/3
(TOPMED)
- HGVS:
19.
rs1488364577 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- C>A
[Show Flanks]
- Chromosome:
- 3:186813456
(GRCh38)
3:186531245
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186813455:C:A
- Gene:
- LINC02043 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
A=0.00001/1
(GnomAD)
- HGVS:
20.
rs1488161650 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 3:186811595
(GRCh38)
3:186529384
(GRCh37)
- Canonical SPDI:
- NC_000003.12:186811594:T:C
- Gene:
- LINC02043 (Varview)
- Functional Consequence:
- non_coding_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
C=0.00051/6
(
ALFA)
C=0.00931/27
(KOREAN)
- HGVS: