SNP Links for Gene (Select 103695366) - SNP

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Links from Gene

Items: 1 to 20 of 5026

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Select item 14910124991.

rs1491012499 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CCCC [Show Flanks]
Chromosome:: 1:84622636 (GRCh38)
1:85088320 (GRCh37)
Canonical SPDI:: NC_000001.11:84622636:C:CCCCC
Gene:: LINC01461 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: CCCCC=0./0 (ALFA)
CCCC=0.000022/3 (GnomAD)
HGVS:: NC_000001.11:g.84622637_84622638insCCCC, NC_000001.10:g.85088320_85088321insCCCC

Select item 14908653252.

rs1490865325 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:84606755 (GRCh38)
1:85072438 (GRCh37)
Canonical SPDI:: NC_000001.11:84606754:G:A
Gene:: LINC01461 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.84606755G>A, NC_000001.10:g.85072438G>A

Select item 14905943203.

rs1490594320 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 1:84603094 (GRCh38)
1:85068777 (GRCh37)
Canonical SPDI:: NC_000001.11:84603093:T:C,NC_000001.11:84603093:T:G
Gene:: LINC01461 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000071/2 (TOMMO)
HGVS:: NC_000001.11:g.84603094T>C, NC_000001.11:g.84603094T>G, NC_000001.10:g.85068777T>C, NC_000001.10:g.85068777T>G

Select item 14904956594.

rs1490495659 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:84616141 (GRCh38)
1:85081824 (GRCh37)
Canonical SPDI:: NC_000001.11:84616140:A:C
Gene:: LINC01461 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.84616141A>C, NC_000001.10:g.85081824A>C

Select item 14904392155.

rs1490439215 [Homo sapiens]

Variant type:: DELINS
Alleles:: A>-,AA [Show Flanks]
Chromosome:: 1:84615320 (GRCh38)
1:85081003 (GRCh37)
Canonical SPDI:: NC_000001.11:84615319:AAAAAAA:AAAAAA,NC_000001.11:84615319:AAAAAAA:AAAAAAAA
Gene:: LINC01461 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAA=0./0 (ALFA)
-=0.000064/17 (TOPMED)
HGVS:: NC_000001.11:g.84615326del, NC_000001.11:g.84615326dup, NC_000001.10:g.85081009del, NC_000001.10:g.85081009dup

Select item 14901099706.

rs1490109970 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 1:84614151 (GRCh38)
1:85079834 (GRCh37)
Canonical SPDI:: NC_000001.11:84614150:A:C
Gene:: LINC01461 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.84614151A>C, NC_000001.10:g.85079834A>C

Select item 14899483127.

rs1489948312 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:84614855 (GRCh38)
1:85080538 (GRCh37)
Canonical SPDI:: NC_000001.11:84614854:A:G
Gene:: LINC01461 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.84614855A>G, NC_000001.10:g.85080538A>G

Select item 14897550938.

rs1489755093 [Homo sapiens]

Variant type:: DELINS
Alleles:: GC>- [Show Flanks]
Chromosome:: 1:84622594 (GRCh38)
1:85088277 (GRCh37)
Canonical SPDI:: NC_000001.11:84622592:CGC:C
Gene:: LINC01461 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.84622594_84622595del, NC_000001.10:g.85088277_85088278del

Select item 14897095379.

rs1489709537 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:84606978 (GRCh38)
1:85072661 (GRCh37)
Canonical SPDI:: NC_000001.11:84606977:C:A
Gene:: LINC01461 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.84606978C>A, NC_000001.10:g.85072661C>A

Select item 148945694610.

rs1489456946 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 1:84610374 (GRCh38)
1:85076057 (GRCh37)
Canonical SPDI:: NC_000001.11:84610373:A:C,NC_000001.11:84610373:A:G
Gene:: LINC01461 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000015/4 (TOPMED)
HGVS:: NC_000001.11:g.84610374A>C, NC_000001.11:g.84610374A>G, NC_000001.10:g.85076057A>C, NC_000001.10:g.85076057A>G

Select item 148922787311.

rs1489227873 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 1:84603296 (GRCh38)
1:85068979 (GRCh37)
Canonical SPDI:: NC_000001.11:84603295:G:A,NC_000001.11:84603295:G:C
Gene:: LINC01461 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.84603296G>A, NC_000001.11:g.84603296G>C, NC_000001.10:g.85068979G>A, NC_000001.10:g.85068979G>C

Select item 148908321812.

rs1489083218 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:84599784 (GRCh38)
1:85065467 (GRCh37)
Canonical SPDI:: NC_000001.11:84599783:G:A
Gene:: LINC01461 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000001.11:g.84599784G>A, NC_000001.10:g.85065467G>A

Select item 148891506613.

rs1488915066 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:84617860 (GRCh38)
1:85083543 (GRCh37)
Canonical SPDI:: NC_000001.11:84617859:A:G
Gene:: LINC01461 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.84617860A>G, NC_000001.10:g.85083543A>G

Select item 148884020214.

rs1488840202 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->A [Show Flanks]
Chromosome:: 1:84601469 (GRCh38)
1:85067153 (GRCh37)
Canonical SPDI:: NC_000001.11:84601469:AAAAAAAA:AAAAAAAAA
Gene:: LINC01461 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: AAAAAAAAA=0./0 (ALFA)
HGVS:: NC_000001.11:g.84601477dup, NC_000001.10:g.85067160dup

Select item 148839778415.

rs1488397784 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:84609854 (GRCh38)
1:85075537 (GRCh37)
Canonical SPDI:: NC_000001.11:84609853:T:G
Gene:: LINC01461 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000021/3 (GnomAD)
HGVS:: NC_000001.11:g.84609854T>G, NC_000001.10:g.85075537T>G

Select item 148820722116.

rs1488207221 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:84598530 (GRCh38)
1:85064213 (GRCh37)
Canonical SPDI:: NC_000001.11:84598529:C:T
Gene:: LINC01461 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000026/7 (TOPMED)
T=0.000029/4 (GnomAD)
HGVS:: NC_000001.11:g.84598530C>T, NC_000001.10:g.85064213C>T

Select item 148813744717.

rs1488137447 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:84599788 (GRCh38)
1:85065471 (GRCh37)
Canonical SPDI:: NC_000001.11:84599787:A:G
Gene:: LINC01461 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
G=0.000011/3 (TOPMED)
HGVS:: NC_000001.11:g.84599788A>G, NC_000001.10:g.85065471A>G

Select item 148801494518.

rs1488014945 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:84603433 (GRCh38)
1:85069116 (GRCh37)
Canonical SPDI:: NC_000001.11:84603432:C:G
Gene:: LINC01461 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.84603433C>G, NC_000001.10:g.85069116C>G

Select item 148783160019.

rs1487831600 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 1:84600951 (GRCh38)
1:85066634 (GRCh37)
Canonical SPDI:: NC_000001.11:84600950:G:T
Gene:: LINC01461 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.84600951G>T, NC_000001.10:g.85066634G>T

Select item 148780280720.

rs1487802807 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 1:84599896 (GRCh38)
1:85065579 (GRCh37)
Canonical SPDI:: NC_000001.11:84599895:C:G
Gene:: LINC01461 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000029/4 (GnomAD)
G=0.000034/9 (TOPMED)
HGVS:: NC_000001.11:g.84599896C>G, NC_000001.10:g.85065579C>G

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