SNP Links for Gene (Select 10517) - SNP

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Select item 14914443791.

rs1491444379 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->T [Show Flanks]
Chromosome:: 17:18758266 (GRCh38)
17:18661580 (GRCh37)
Canonical SPDI:: NC_000017.11:18758266:T:TT
Gene:: FBXW10 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TT=0./0 (ALFA)
T=0.000008/2 (TOPMED)
T=0.000011/1 (GnomAD_exomes)
HGVS:: NC_000017.11:g.18758267dup, NC_000017.10:g.18661580dup

Select item 14914154132.

rs1491415413 [Homo sapiens]

Variant type:: DELINS
Alleles:: CA>- [Show Flanks]
Chromosome:: 17:18771118 (GRCh38)
17:18674431 (GRCh37)
Canonical SPDI:: NC_000017.11:18771116:ACA:A
Gene:: FBXW10 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000084/1 (ALFA)
-=0.000123/17 (GnomAD)
-=0.000468/3 (1000Genomes)
HGVS:: NC_000017.11:g.18771118_18771119del, NC_000017.10:g.18674431_18674432del

Select item 14913599133.

rs1491359913 [Homo sapiens]

Variant type:: INS
Alleles:: ->G [Show Flanks]
Chromosome:: 17:18770307 (GRCh38)
17:18673621 (GRCh37)
Canonical SPDI:: NC_000017.11:18770307::G
Gene:: FBXW10 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.00028/1 (GnomAD)
HGVS:: NC_000017.11:g.18770307_18770308insG, NC_000017.10:g.18673620_18673621insG

Select item 14912810784.

rs1491281078 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->G [Show Flanks]
Chromosome:: 17:18759618 (GRCh38)
17:18662932 (GRCh37)
Canonical SPDI:: NC_000017.11:18759618:G:GG
Gene:: FBXW10 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: GG=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000017.11:g.18759619dup, NC_000017.10:g.18662932dup

Select item 14912566175.

rs1491256617 has merged into rs5819658 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAA>-,AA,AAA,AAAA,AAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA [Show Flanks]
Chromosome:: 17:18767456 (GRCh38)
17:18670769 (GRCh37)
Canonical SPDI:: NC_000017.11:18767443:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000017.11:18767443:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000017.11:18767443:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000017.11:18767443:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000017.11:18767443:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000017.11:18767443:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000017.11:18767443:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000017.11:18767443:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000017.11:18767443:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:18767443:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA
Gene:: FBXW10 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAA=0./0 (ALFA)
AAAAA=0.000004/1 (TOPMED)
-=0.286741/1436 (1000Genomes)
HGVS:: NC_000017.11:g.18767456_18767461del, NC_000017.11:g.18767458_18767461del, NC_000017.11:g.18767459_18767461del, NC_000017.11:g.18767460_18767461del, NC_000017.11:g.18767461del, NC_000017.11:g.18767461dup, NC_000017.11:g.18767460_18767461dup, NC_000017.11:g.18767459_18767461dup, NC_000017.11:g.18767457_18767461dup, NC_000017.11:g.18767456_18767461dup, NC_000017.10:g.18670769_18670774del, NC_000017.10:g.18670771_18670774del, NC_000017.10:g.18670772_18670774del, NC_000017.10:g.18670773_18670774del, NC_000017.10:g.18670774del, NC_000017.10:g.18670774dup, NC_000017.10:g.18670773_18670774dup, NC_000017.10:g.18670772_18670774dup, NC_000017.10:g.18670770_18670774dup, NC_000017.10:g.18670769_18670774dup

Select item 14911956266.

rs1491195626 [Homo sapiens]

Variant type:: DELINS
Alleles:: GT>- [Show Flanks]
Chromosome:: 17:18759619 (GRCh38)
17:18662932 (GRCh37)
Canonical SPDI:: NC_000017.11:18759617:TGT:T
Gene:: FBXW10 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency
MAF:: -=0.00007/2 (TOMMO)
HGVS:: NC_000017.11:g.18759619_18759620del, NC_000017.10:g.18662932_18662933del

Select item 14911810147.

rs1491181014 has merged into rs60946049 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTT>-,T,TT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT [Show Flanks]
Chromosome:: 17:18770319 (GRCh38)
17:18673632 (GRCh37)
Canonical SPDI:: NC_000017.11:18770306:TTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000017.11:18770306:TTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000017.11:18770306:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000017.11:18770306:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000017.11:18770306:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000017.11:18770306:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000017.11:18770306:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000017.11:18770306:TTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT
Gene:: FBXW10 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTTTTTTTT=0./0 (ALFA)
-=0.1232/457 (TWINSUK)
-=0.1305/503 (ALSPAC)
-=0.275/11 (GENOME_DK)
-=0.4836/2422 (1000Genomes)
HGVS:: NC_000017.11:g.18770319_18770321del, NC_000017.11:g.18770320_18770321del, NC_000017.11:g.18770321del, NC_000017.11:g.18770321dup, NC_000017.11:g.18770320_18770321dup, NC_000017.11:g.18770319_18770321dup, NC_000017.11:g.18770318_18770321dup, NC_000017.11:g.18770317_18770321dup, NC_000017.10:g.18673632_18673634del, NC_000017.10:g.18673633_18673634del, NC_000017.10:g.18673634del, NC_000017.10:g.18673634dup, NC_000017.10:g.18673633_18673634dup, NC_000017.10:g.18673632_18673634dup, NC_000017.10:g.18673631_18673634dup, NC_000017.10:g.18673630_18673634dup

Select item 14910228378.

rs1491022837 has merged into rs5819658 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAAAAA>-,AA,AAA,AAAA,AAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAA [Show Flanks]
Chromosome:: 17:18767456 (GRCh38)
17:18670769 (GRCh37)
Canonical SPDI:: NC_000017.11:18767443:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000017.11:18767443:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000017.11:18767443:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000017.11:18767443:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000017.11:18767443:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000017.11:18767443:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000017.11:18767443:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000017.11:18767443:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000017.11:18767443:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000017.11:18767443:AAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA
Gene:: FBXW10 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAA=0./0 (ALFA)
AAAAA=0.000004/1 (TOPMED)
-=0.286741/1436 (1000Genomes)
HGVS:: NC_000017.11:g.18767456_18767461del, NC_000017.11:g.18767458_18767461del, NC_000017.11:g.18767459_18767461del, NC_000017.11:g.18767460_18767461del, NC_000017.11:g.18767461del, NC_000017.11:g.18767461dup, NC_000017.11:g.18767460_18767461dup, NC_000017.11:g.18767459_18767461dup, NC_000017.11:g.18767457_18767461dup, NC_000017.11:g.18767456_18767461dup, NC_000017.10:g.18670769_18670774del, NC_000017.10:g.18670771_18670774del, NC_000017.10:g.18670772_18670774del, NC_000017.10:g.18670773_18670774del, NC_000017.10:g.18670774del, NC_000017.10:g.18670774dup, NC_000017.10:g.18670773_18670774dup, NC_000017.10:g.18670772_18670774dup, NC_000017.10:g.18670770_18670774dup, NC_000017.10:g.18670769_18670774dup

Select item 14909094059.

rs1490909405 [Homo sapiens]

Variant type:: DEL
Alleles:: G>- [Show Flanks]
Chromosome:: 17:18755003 (GRCh38)
17:18658316 (GRCh37)
Canonical SPDI:: NC_000017.11:18755002:G:
Gene:: FBXW10 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000017.11:g.18755003del, NC_000017.10:g.18658316del

Select item 149087802410.

rs1490878024 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 17:18753863 (GRCh38)
17:18657176 (GRCh37)
Canonical SPDI:: NC_000017.11:18753862:C:T
Gene:: FBXW10 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000022/3 (GnomAD)
T=0.000038/10 (TOPMED)
HGVS:: NC_000017.11:g.18753863C>T, NC_000017.10:g.18657176C>T

Select item 149085937011.

rs1490859370 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 17:18772361 (GRCh38)
17:18675674 (GRCh37)
Canonical SPDI:: NC_000017.11:18772360:T:C
Gene:: FBXW10 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: C=0.000005/1 (GnomAD_exomes)
HGVS:: NC_000017.11:g.18772361T>C, NC_000017.10:g.18675674T>C

Select item 149072486412.

rs1490724864 [Homo sapiens]

Variant type:: DELINS
Alleles:: AAGT>- [Show Flanks]
Chromosome:: 17:18746630 (GRCh38)
17:18649943 (GRCh37)
Canonical SPDI:: NC_000017.11:18746626:AGTAAGT:AGT
Gene:: FBXW10 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: AGT=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.18746630_18746633del, NC_000017.10:g.18649943_18649946del, NG_056890.1:g.115_118del

Select item 149072318713.

rs1490723187 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 17:18752439 (GRCh38)
17:18655752 (GRCh37)
Canonical SPDI:: NC_000017.11:18752438:G:A,NC_000017.11:18752438:G:C
Gene:: FBXW10 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by cluster
MAF:: A=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.18752439G>A, NC_000017.11:g.18752439G>C, NC_000017.10:g.18655752G>A, NC_000017.10:g.18655752G>C

Select item 149053084714.

rs1490530847 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 17:18749455 (GRCh38)
17:18652768 (GRCh37)
Canonical SPDI:: NC_000017.11:18749454:G:A,NC_000017.11:18749454:G:C
Gene:: FBXW10 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000007/1 (GnomAD)
G=0.5/1 (SGDP_PRJ)
HGVS:: NC_000017.11:g.18749455G>A, NC_000017.11:g.18749455G>C, NC_000017.10:g.18652768G>A, NC_000017.10:g.18652768G>C

Select item 149052704715.

rs1490527047 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:18777980 (GRCh38)
17:18681293 (GRCh37)
Canonical SPDI:: NC_000017.11:18777979:G:A
Gene:: FBXW10 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
A=0.000177/3 (TOMMO)
HGVS:: NC_000017.11:g.18777980G>A, NC_000017.10:g.18681293G>A

Select item 149034981816.

rs1490349818 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:18762016 (GRCh38)
17:18665329 (GRCh37)
Canonical SPDI:: NC_000017.11:18762015:G:A
Gene:: FBXW10 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000019/5 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000017.11:g.18762016G>A, NC_000017.10:g.18665329G>A

Select item 149029312517.

rs1490293125 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 17:18762839 (GRCh38)
17:18666152 (GRCh37)
Canonical SPDI:: NC_000017.11:18762838:A:C
Gene:: FBXW10 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000017.11:g.18762839A>C, NC_000017.10:g.18666152A>C

Select item 149023458918.

rs1490234589 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 17:18747068 (GRCh38)
17:18650381 (GRCh37)
Canonical SPDI:: NC_000017.11:18747067:G:A
Gene:: FBXW10 (Varview)
Functional Consequence:: genic_upstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000021/3 (GnomAD)
A=0.000034/9 (TOPMED)
HGVS:: NC_000017.11:g.18747068G>A, NC_000017.10:g.18650381G>A

Select item 149018277319.

rs1490182773 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 17:18767841 (GRCh38)
17:18671154 (GRCh37)
Canonical SPDI:: NC_000017.11:18767840:G:T
Gene:: FBXW10 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000017.11:g.18767841G>T, NC_000017.10:g.18671154G>T

Select item 149006533320.

rs1490065333 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 17:18777656 (GRCh38)
17:18680969 (GRCh37)
Canonical SPDI:: NC_000017.11:18777655:G:T
Gene:: FBXW10 (Varview)
Functional Consequence:: genic_downstream_transcript_variant,intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000017.11:g.18777656G>T, NC_000017.10:g.18680969G>T

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