SNP Links for Gene (Select 105375844) - SNP

Links from Gene

Items: 1 to 20 of 1752

<< First< Prev

Page of 88

Next >Last >>

Select item 14911507981.

rs1491150798 has merged into rs201733165 [Homo sapiens]

Variant type:: DELINS
Alleles:: CTCT>-,CT,CTCTCT [Show Flanks]
Chromosome:: 8:55157859 (GRCh38)
8:56070419 (GRCh37)
Canonical SPDI:: NC_000008.11:55157851:TCTCTCTCTCT:TCTCTCT,NC_000008.11:55157851:TCTCTCTCTCT:TCTCTCTCT,NC_000008.11:55157851:TCTCTCTCTCT:TCTCTCTCTCTCT
Gene:: XKR4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TCTCTCTCTCTCT=0./0 (ALFA)
-=0.00078/3 (ALSPAC)
-=0.00081/3 (TWINSUK)
-=0.00804/36 (Estonian)
-=0.01333/8 (NorthernSweden)
-=0.05606/281 (1000Genomes)
-=0.10178/1706 (TOMMO)
HGVS:: NC_000008.11:g.55157853CT[3], NC_000008.11:g.55157853CT[4], NC_000008.11:g.55157853CT[6], NC_000008.10:g.56070413CT[3], NC_000008.10:g.56070413CT[4], NC_000008.10:g.56070413CT[6]

Select item 14888447512.

rs1488844751 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 8:55159588 (GRCh38)
8:56072148 (GRCh37)
Canonical SPDI:: NC_000008.11:55159587:G:T
Gene:: XKR4 (Varview), LOC105375844 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.55159588G>T, NC_000008.10:g.56072148G>T

Select item 14875110753.

rs1487511075 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 8:55157926 (GRCh38)
8:56070486 (GRCh37)
Canonical SPDI:: NC_000008.11:55157925:A:T
Gene:: XKR4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000029/4 (GnomAD)
HGVS:: NC_000008.11:g.55157926A>T, NC_000008.10:g.56070486A>T

Select item 14874268564.

rs1487426856 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 8:55164111 (GRCh38)
8:56076671 (GRCh37)
Canonical SPDI:: NC_000008.11:55164110:T:C
Gene:: XKR4 (Varview), LOC105375844 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000008.11:g.55164111T>C, NC_000008.10:g.56076671T>C

Select item 14873466345.

rs1487346634 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 8:55163853 (GRCh38)
8:56076413 (GRCh37)
Canonical SPDI:: NC_000008.11:55163852:A:T
Gene:: XKR4 (Varview), LOC105375844 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.55163853A>T, NC_000008.10:g.56076413A>T

Select item 14870049576.

rs1487004957 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:55164086 (GRCh38)
8:56076646 (GRCh37)
Canonical SPDI:: NC_000008.11:55164085:A:G
Gene:: XKR4 (Varview), LOC105375844 (Varview)
Functional Consequence:: intron_variant
HGVS:: NC_000008.11:g.55164086A>G, NC_000008.10:g.56076646A>G

Select item 14865972997.

rs1486597299 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:55161174 (GRCh38)
8:56073734 (GRCh37)
Canonical SPDI:: NC_000008.11:55161173:A:G
Gene:: XKR4 (Varview), LOC105375844 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000019/5 (TOPMED)
G=0.000029/4 (GnomAD)
HGVS:: NC_000008.11:g.55161174A>G, NC_000008.10:g.56073734A>G

Select item 14864702218.

rs1486470221 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 8:55160642 (GRCh38)
8:56073202 (GRCh37)
Canonical SPDI:: NC_000008.11:55160641:T:C
Gene:: XKR4 (Varview), LOC105375844 (Varview)
Functional Consequence:: 2KB_upstream_variant,intron_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000008.11:g.55160642T>C, NC_000008.10:g.56073202T>C

Select item 14863741109.

rs1486374110 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:55163502 (GRCh38)
8:56076062 (GRCh37)
Canonical SPDI:: NC_000008.11:55163501:G:A
Gene:: XKR4 (Varview), LOC105375844 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
A=0.000036/5 (GnomAD)
HGVS:: NC_000008.11:g.55163502G>A, NC_000008.10:g.56076062G>A

Select item 148626614210.

rs1486266142 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 8:55157376 (GRCh38)
8:56069936 (GRCh37)
Canonical SPDI:: NC_000008.11:55157375:A:T
Gene:: XKR4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000008.11:g.55157376A>T, NC_000008.10:g.56069936A>T

Select item 148602443311.

rs1486024433 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C,T [Show Flanks]
Chromosome:: 8:55164487 (GRCh38)
8:56077047 (GRCh37)
Canonical SPDI:: NC_000008.11:55164486:G:A,NC_000008.11:55164486:G:C,NC_000008.11:55164486:G:T
Gene:: XKR4 (Varview), LOC105375844 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
C=0.000007/1 (GnomAD)
A=0.000008/1 (GnomAD_exomes)
C=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.55164487G>A, NC_000008.11:g.55164487G>C, NC_000008.11:g.55164487G>T, NC_000008.10:g.56077047G>A, NC_000008.10:g.56077047G>C, NC_000008.10:g.56077047G>T

Select item 148601297612.

rs1486012976 [Homo sapiens]

Variant type:: SNV:
Alleles:: G>T
Chromosome:: no mapping
Canonical SPDI:

Select item 148528722613.

rs1485287226 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 8:55162103 (GRCh38)
8:56074663 (GRCh37)
Canonical SPDI:: NC_000008.11:55162102:C:A
Gene:: XKR4 (Varview), LOC105375844 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000008.11:g.55162103C>A, NC_000008.10:g.56074663C>A

Select item 148490139414.

rs1484901394 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:55162122 (GRCh38)
8:56074682 (GRCh37)
Canonical SPDI:: NC_000008.11:55162121:A:G
Gene:: XKR4 (Varview), LOC105375844 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.55162122A>G, NC_000008.10:g.56074682A>G

Select item 148415292715.

rs1484152927 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:55158635 (GRCh38)
8:56071195 (GRCh37)
Canonical SPDI:: NC_000008.11:55158634:A:G
Gene:: XKR4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000011/3 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000008.11:g.55158635A>G, NC_000008.10:g.56071195A>G

Select item 148335320216.

rs1483353202 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 8:55162946 (GRCh38)
8:56075506 (GRCh37)
Canonical SPDI:: NC_000008.11:55162945:A:G
Gene:: XKR4 (Varview), LOC105375844 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
G=0.000038/10 (TOPMED)
HGVS:: NC_000008.11:g.55162946A>G, NC_000008.10:g.56075506A>G

Select item 148304621517.

rs1483046215 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 8:55163367 (GRCh38)
8:56075927 (GRCh37)
Canonical SPDI:: NC_000008.11:55163366:A:T
Gene:: XKR4 (Varview), LOC105375844 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000015/4 (TOPMED)
HGVS:: NC_000008.11:g.55163367A>T, NC_000008.10:g.56075927A>T

Select item 148304088518.

rs1483040885 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 8:55164144 (GRCh38)
8:56076704 (GRCh37)
Canonical SPDI:: NC_000008.11:55164143:G:A
Gene:: XKR4 (Varview), LOC105375844 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.55164144G>A, NC_000008.10:g.56076704G>A, XR_928903.3:n.220G>A, XR_928903.2:n.2654G>A, XR_928903.1:n.199G>A

Select item 148302571219.

rs1483025712 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 8:55164332 (GRCh38)
8:56076892 (GRCh37)
Canonical SPDI:: NC_000008.11:55164331:A:C
Gene:: XKR4 (Varview), LOC105375844 (Varview)
Functional Consequence:: non_coding_transcript_variant,intron_variant
HGVS:: NC_000008.11:g.55164332A>C, NC_000008.10:g.56076892A>C, XR_928903.3:n.408A>C, XR_928903.2:n.2842A>C, XR_928903.1:n.387A>C

Select item 148293163020.

rs1482931630 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 8:55163049 (GRCh38)
8:56075609 (GRCh37)
Canonical SPDI:: NC_000008.11:55163048:T:C
Gene:: XKR4 (Varview), LOC105375844 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000008.11:g.55163049T>C, NC_000008.10:g.56075609T>C

dbSNP

Result Filters

Validation Status

Publication

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to:

Links from Gene

Items: 1 to 20 of 1752

Display Settings:

Send to:

Supplemental Content

Find related data

Recent activity