SNP Links for Gene (Select 105376745) - SNP

Warning: The NCBI web site requires JavaScript to function. more...

Links from Gene

Items: 1 to 20 of 1000

<< First< Prev

Page of 50

Next >Last >>

Select item 14912728241.

rs1491272824 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->AAAAGC [Show Flanks]
Chromosome:: 1:12824125 (GRCh38)
1:12883984 (GRCh37)
Canonical SPDI:: NC_000001.11:12824125:CAAAAGC:CAAAAGCAAAAGC
Gene:: PRAMEF11 (Varview), LINC01784 (Varview)
Functional Consequence:: 500B_downstream_variant,upstream_transcript_variant,downstream_transcript_variant,2KB_upstream_variant
Validated:: by cluster
HGVS:: NC_000001.11:g.12824127_12824132dup, NC_000001.10:g.12883985_12883990dup, NW_012132914.1:g.5640_5645dup

Select item 14896252282.

rs1489625228 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,C [Show Flanks]
Chromosome:: 1:12822208 (GRCh38)
1:12882070 (GRCh37)
Canonical SPDI:: NC_000001.11:12822207:T:A,NC_000001.11:12822207:T:C
Gene:: LINC01784 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
A=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.12822208T>A, NC_000001.11:g.12822208T>C, NC_000001.10:g.12882070T>A, NC_000001.10:g.12882070T>C, NW_012132914.1:g.3721T>A, NW_012132914.1:g.3721T>C

Select item 14892312523.

rs1489231252 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 1:12822286 (GRCh38)
1:12882148 (GRCh37)
Canonical SPDI:: NC_000001.11:12822285:T:A
Gene:: LINC01784 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000022/3 (GnomAD)
A=0.00003/8 (TOPMED)
HGVS:: NC_000001.11:g.12822286T>A, NC_000001.10:g.12882148T>A, NW_012132914.1:g.3799T>A

Select item 14891229774.

rs1489122977 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:12825170 (GRCh38)
1:12885028 (GRCh37)
Canonical SPDI:: NC_000001.11:12825169:G:A
Gene:: PRAMEF11 (Varview), LINC01784 (Varview)
Functional Consequence:: synonymous_variant,2KB_upstream_variant,upstream_transcript_variant,coding_sequence_variant
Validated:: by frequency
MAF:: A=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.12825170G>A, NC_000001.10:g.12885028G>A, NW_012132914.1:g.6683G>A, NM_001146344.3:c.1209C>T, NM_001146344.2:c.1209C>T, NM_001146344.1:c.1083C>T, XM_011541479.3:c.1209C>T, XM_011541479.2:c.1209C>T, XM_011541479.1:c.1209C>T

Select item 14887949215.

rs1488794921 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:12824971 (GRCh38)
1:12884829 (GRCh37)
Canonical SPDI:: NC_000001.11:12824970:C:T
Gene:: PRAMEF11 (Varview), LINC01784 (Varview)
Functional Consequence:: missense_variant,2KB_upstream_variant,upstream_transcript_variant,coding_sequence_variant
Validated:: by frequency
MAF:: T=0.000004/1 (GnomAD_exomes)
HGVS:: NC_000001.11:g.12824971C>T, NC_000001.10:g.12884829C>T, NW_012132914.1:g.6484C>T, NM_001146344.3:c.1408G>A, NM_001146344.2:c.1408G>A, NM_001146344.1:c.1282G>A, XM_011541479.3:c.1408G>A, XM_011541479.2:c.1408G>A, XM_011541479.1:c.1408G>A, NP_001139816.2:p.Asp470Asn, XP_011539781.1:p.Asp470Asn

Select item 14885014566.

rs1488501456 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:12823105 (GRCh38)
1:12882968 (GRCh37)
Canonical SPDI:: NC_000001.11:12823104:C:T
Gene:: LINC01784 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
T=0.000537/9 (TOMMO)
T=0.00138/4 (KOREAN)
HGVS:: NC_000001.11:g.12823105C>T, NC_000001.10:g.12882968C>T, NW_012132914.1:g.4618C>T, NR_146629.1:n.119G>A

Select item 14881884477.

rs1488188447 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 1:12822902 (GRCh38)
1:12882765 (GRCh37)
Canonical SPDI:: NC_000001.11:12822901:A:T
Gene:: LINC01784 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by cluster
MAF:: T=0.000015/2 (GnomAD)
T=0.000535/9 (TOMMO)
T=0.00583/17 (KOREAN)
HGVS:: NC_000001.11:g.12822902A>T, NC_000001.10:g.12882765A>T, NW_012132914.1:g.4415A>T, NR_146629.1:n.226T>A

Select item 14881775468.

rs1488177546 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 1:12823406 (GRCh38)
1:12883269 (GRCh37)
Canonical SPDI:: NC_000001.11:12823405:T:G
Gene:: LINC01784 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.12823406T>G, NC_000001.10:g.12883269T>G, NW_012132914.1:g.4919T>G

Select item 14880299159.

rs1488029915 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:12823183 (GRCh38)
1:12883046 (GRCh37)
Canonical SPDI:: NC_000001.11:12823182:G:C
Gene:: LINC01784 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000001.11:g.12823183G>C, NC_000001.10:g.12883046G>C, NW_012132914.1:g.4696G>C, NR_146629.1:n.41C>G

Select item 148766492610.

rs1487664926 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G,T [Show Flanks]
Chromosome:: 1:12822742 (GRCh38)
1:12882605 (GRCh37)
Canonical SPDI:: NC_000001.11:12822741:A:C,NC_000001.11:12822741:A:G,NC_000001.11:12822741:A:T
Gene:: LINC01784 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000014/2 (GnomAD)
T=0.000312/2 (1000Genomes)
HGVS:: NC_000001.11:g.12822742A>C, NC_000001.11:g.12822742A>G, NC_000001.11:g.12822742A>T, NC_000001.10:g.12882605A>C, NC_000001.10:g.12882605A>G, NC_000001.10:g.12882605A>T, NW_012132914.1:g.4255A>C, NW_012132914.1:g.4255A>G, NW_012132914.1:g.4255A>T, NR_146629.1:n.386T>G, NR_146629.1:n.386T>C, NR_146629.1:n.386T>A

Select item 148742786511.

rs1487427865 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:12823521 (GRCh38)
1:12883384 (GRCh37)
Canonical SPDI:: NC_000001.11:12823520:A:G
Gene:: LINC01784 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000057/15 (TOPMED)
G=0.000072/10 (GnomAD)
HGVS:: NC_000001.11:g.12823521A>G, NC_000001.10:g.12883384A>G, NW_012132914.1:g.5034A>G

Select item 148620021912.

rs1486200219 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:12824521 (GRCh38)
1:12884379 (GRCh37)
Canonical SPDI:: NC_000001.11:12824520:G:A
Gene:: PRAMEF11 (Varview), LINC01784 (Varview)
Functional Consequence:: 500B_downstream_variant,upstream_transcript_variant,downstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.12824521G>A, NC_000001.10:g.12884379G>A, NW_012132914.1:g.6034G>A

Select item 148616700313.

rs1486167003 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 1:12824277 (GRCh38)
1:12884135 (GRCh37)
Canonical SPDI:: NC_000001.11:12824276:T:C
Gene:: PRAMEF11 (Varview), LINC01784 (Varview)
Functional Consequence:: 500B_downstream_variant,upstream_transcript_variant,downstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0.000071/1 (ALFA)
C=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.12824277T>C, NC_000001.10:g.12884135T>C, NW_012132914.1:g.5790T>C

Select item 148614094714.

rs1486140947 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A,G [Show Flanks]
Chromosome:: 1:12822337 (GRCh38)
1:12882199 (GRCh37)
Canonical SPDI:: NC_000001.11:12822336:T:A,NC_000001.11:12822336:T:G
Gene:: LINC01784 (Varview)
Functional Consequence:: 500B_downstream_variant,downstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
A=0.000023/6 (TOPMED)
HGVS:: NC_000001.11:g.12822337T>A, NC_000001.11:g.12822337T>G, NC_000001.10:g.12882199T>A, NC_000001.10:g.12882199T>G, NW_012132914.1:g.3850T>A, NW_012132914.1:g.3850T>G

Select item 148609026015.

rs1486090260 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 1:12823501 (GRCh38)
1:12883364 (GRCh37)
Canonical SPDI:: NC_000001.11:12823500:G:A
Gene:: LINC01784 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.002455/39 (ALFA)
G=0./0 (SGDP_PRJ)
A=0.001994/271 (GnomAD)
A=0.014777/43 (KOREAN)
A=0.025988/432 (TOMMO)
A=0.032418/59 (Korea1K)
HGVS:: NC_000001.11:g.12823501G>A, NC_000001.10:g.12883364G>A, NW_012132914.1:g.5014G>A

Select item 148496099616.

rs1484960996 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 1:12824817 (GRCh38)
1:12884675 (GRCh37)
Canonical SPDI:: NC_000001.11:12824816:C:A
Gene:: PRAMEF11 (Varview), LINC01784 (Varview)
Functional Consequence:: upstream_transcript_variant,genic_downstream_transcript_variant,3_prime_UTR_variant,downstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000029/4 (GnomAD)
A=0.000053/14 (TOPMED)
HGVS:: NC_000001.11:g.12824817C>A, NC_000001.10:g.12884675C>A, NW_012132914.1:g.6330C>A, NM_001146344.3:c.*125G>T, NM_001146344.2:c.*125G>T, NM_001146344.1:c.*125G>T

Select item 148492586817.

rs1484925868 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 1:12823093 (GRCh38)
1:12882956 (GRCh37)
Canonical SPDI:: NC_000001.11:12823092:T:A
Gene:: LINC01784 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000001.11:g.12823093T>A, NC_000001.10:g.12882956T>A, NW_012132914.1:g.4606T>A, NR_146629.1:n.131A>T

Select item 148459410918.

rs1484594109 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 1:12824125 (GRCh38)
1:12883983 (GRCh37)
Canonical SPDI:: NC_000001.11:12824124:A:G
Gene:: PRAMEF11 (Varview), LINC01784 (Varview)
Functional Consequence:: 500B_downstream_variant,upstream_transcript_variant,downstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000084/1 (ALFA)
G=0.000049/6 (GnomAD)
G=0.000468/3 (1000Genomes)
HGVS:: NC_000001.11:g.12824125A>G, NC_000001.10:g.12883983A>G, NW_012132914.1:g.5638A>G

Select item 148426576919.

rs1484265769 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 1:12824416 (GRCh38)
1:12884274 (GRCh37)
Canonical SPDI:: NC_000001.11:12824415:G:C
Gene:: PRAMEF11 (Varview), LINC01784 (Varview)
Functional Consequence:: 500B_downstream_variant,upstream_transcript_variant,downstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000107/2 (TOMMO)
HGVS:: NC_000001.11:g.12824416G>C, NC_000001.10:g.12884274G>C, NW_012132914.1:g.5929G>C

Select item 148423371420.

rs1484233714 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 1:12825112 (GRCh38)
1:12884970 (GRCh37)
Canonical SPDI:: NC_000001.11:12825111:C:T
Gene:: PRAMEF11 (Varview), LINC01784 (Varview)
Functional Consequence:: missense_variant,2KB_upstream_variant,upstream_transcript_variant,coding_sequence_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000008/2 (TOPMED)
HGVS:: NC_000001.11:g.12825112C>T, NC_000001.10:g.12884970C>T, NW_012132914.1:g.6625C>T, NM_001146344.3:c.1267G>A, NM_001146344.2:c.1267G>A, NM_001146344.1:c.1141G>A, XM_011541479.3:c.1267G>A, XM_011541479.2:c.1267G>A, XM_011541479.1:c.1267G>A, NP_001139816.2:p.Gly423Ser, XP_011539781.1:p.Gly423Ser

<< First< Prev

Page of 50

Next >Last >>

Supplemental Content

Filters: Manage Filters

Find related data

Recent activity

Clear Turn Off Turn On

SNP Links for Gene (Select 105376745) (1000)
SNP

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

dbSNP

Result Filters

Validation Status

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to: