Links from Gene
Items: 1 to 20 of 11307
1.
rs1491589009 has merged into rs764392129 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTTTTTTTTTTTTTTT>-,T,TTT,TTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 10:106138806
(GRCh38)
10:107898564
(GRCh37)
- Canonical SPDI:
- NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000010.11:106138803:TTTTTTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- LOC105378469 (Varview), LINC02624 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TT=0./0
(
ALFA)
-=0.03099/441
(TOMMO)
- HGVS:
NC_000010.11:g.106138806_106138829del, NC_000010.11:g.106138807_106138829del, NC_000010.11:g.106138809_106138829del, NC_000010.11:g.106138815_106138829del, NC_000010.11:g.106138818_106138829del, NC_000010.11:g.106138819_106138829del, NC_000010.11:g.106138820_106138829del, NC_000010.11:g.106138821_106138829del, NC_000010.11:g.106138822_106138829del, NC_000010.11:g.106138823_106138829del, NC_000010.11:g.106138824_106138829del, NC_000010.11:g.106138825_106138829del, NC_000010.11:g.106138826_106138829del, NC_000010.11:g.106138827_106138829del, NC_000010.11:g.106138828_106138829del, NC_000010.11:g.106138829del, NC_000010.11:g.106138829dup, NC_000010.11:g.106138828_106138829dup, NC_000010.11:g.106138827_106138829dup, NC_000010.11:g.106138826_106138829dup, NC_000010.11:g.106138825_106138829dup, NC_000010.11:g.106138824_106138829dup, NC_000010.11:g.106138823_106138829dup, NC_000010.11:g.106138822_106138829dup, NC_000010.11:g.106138821_106138829dup, NC_000010.11:g.106138820_106138829dup, NC_000010.11:g.106138819_106138829dup, NC_000010.11:g.106138818_106138829dup, NC_000010.11:g.106138817_106138829dup, NC_000010.11:g.106138816_106138829dup, NC_000010.11:g.106138815_106138829dup, NC_000010.11:g.106138814_106138829dup, NC_000010.11:g.106138813_106138829dup, NC_000010.11:g.106138812_106138829dup, NC_000010.11:g.106138811_106138829dup, NC_000010.11:g.106138810_106138829dup, NC_000010.11:g.106138809_106138829dup, NC_000010.11:g.106138808_106138829dup, NC_000010.11:g.106138807_106138829dup, NC_000010.11:g.106138806_106138829dup, NC_000010.11:g.106138805_106138829dup, NC_000010.11:g.106138804_106138829dup, NC_000010.11:g.106138829_106138830insTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.106138829_106138830insTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.106138829_106138830insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.106138829_106138830insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.106138829_106138830insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.106138829_106138830insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.106138829_106138830insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.106138829_106138830insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.106138829_106138830insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.106138829_106138830insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.106138829_106138830insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.106138829_106138830insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.11:g.106138829_106138830insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.107898564_107898587del, NC_000010.10:g.107898565_107898587del, NC_000010.10:g.107898567_107898587del, NC_000010.10:g.107898573_107898587del, NC_000010.10:g.107898576_107898587del, NC_000010.10:g.107898577_107898587del, NC_000010.10:g.107898578_107898587del, NC_000010.10:g.107898579_107898587del, NC_000010.10:g.107898580_107898587del, NC_000010.10:g.107898581_107898587del, NC_000010.10:g.107898582_107898587del, NC_000010.10:g.107898583_107898587del, NC_000010.10:g.107898584_107898587del, NC_000010.10:g.107898585_107898587del, NC_000010.10:g.107898586_107898587del, NC_000010.10:g.107898587del, NC_000010.10:g.107898587dup, NC_000010.10:g.107898586_107898587dup, NC_000010.10:g.107898585_107898587dup, NC_000010.10:g.107898584_107898587dup, NC_000010.10:g.107898583_107898587dup, NC_000010.10:g.107898582_107898587dup, NC_000010.10:g.107898581_107898587dup, NC_000010.10:g.107898580_107898587dup, NC_000010.10:g.107898579_107898587dup, NC_000010.10:g.107898578_107898587dup, NC_000010.10:g.107898577_107898587dup, NC_000010.10:g.107898576_107898587dup, NC_000010.10:g.107898575_107898587dup, NC_000010.10:g.107898574_107898587dup, NC_000010.10:g.107898573_107898587dup, NC_000010.10:g.107898572_107898587dup, NC_000010.10:g.107898571_107898587dup, NC_000010.10:g.107898570_107898587dup, NC_000010.10:g.107898569_107898587dup, NC_000010.10:g.107898568_107898587dup, NC_000010.10:g.107898567_107898587dup, NC_000010.10:g.107898566_107898587dup, NC_000010.10:g.107898565_107898587dup, NC_000010.10:g.107898564_107898587dup, NC_000010.10:g.107898563_107898587dup, NC_000010.10:g.107898562_107898587dup, NC_000010.10:g.107898587_107898588insTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.107898587_107898588insTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.107898587_107898588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.107898587_107898588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.107898587_107898588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.107898587_107898588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.107898587_107898588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.107898587_107898588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.107898587_107898588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.107898587_107898588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.107898587_107898588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.107898587_107898588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000010.10:g.107898587_107898588insTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
4.
rs1491505719 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->TTCTTT,TTCTTTTCTTT
[Show Flanks]
- Chromosome:
- 10:106187508
(GRCh38)
10:107947267
(GRCh37)
- Canonical SPDI:
- NC_000010.11:106187508:TTT:TTTTTCTTT,NC_000010.11:106187508:TTT:TTTTTCTTTTCTTT
- Gene:
- LINC02624 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa
- MAF:
TTTTTCTTTTCTTT=0./0
(
ALFA)
- HGVS:
5.
rs1491503070 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AC>-
[Show Flanks]
- Chromosome:
- 10:106167997
(GRCh38)
10:107927755
(GRCh37)
- Canonical SPDI:
- NC_000010.11:106167994:ACAC:AC
- Gene:
- LINC02624 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
ACAC=0./0
(
ALFA)
-=0.00197/19
(GnomAD)
- HGVS:
6.
rs1491495360 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->CACCTCAC
[Show Flanks]
- Chromosome:
- 10:106167995
(GRCh38)
10:107927754
(GRCh37)
- Canonical SPDI:
- NC_000010.11:106167995:CACCTCAC:CACCTCACCACCTCAC
- Gene:
- LINC02624 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
CACCTCACCACCTCAC=0./0
(
ALFA)
CACCTCAC=0.00022/2
(GnomAD)
- HGVS:
7.
rs1491494691 has merged into rs34061845 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TC>-
[Show Flanks]
- Chromosome:
- 10:106138361
(GRCh38)
10:107898119
(GRCh37)
- Canonical SPDI:
- NC_000010.11:106138358:TCTC:TC
- Gene:
- LOC105378469 (Varview), LINC02624 (Varview)
- Functional Consequence:
- intron_variant,2KB_upstream_variant,upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TCTC=0.02788/453
(
ALFA)
-=0.012315/206
(TOMMO)
-=0.054029/271
(1000Genomes)
-=0.057908/6023
(GnomAD)
-=0.175/7
(GENOME_DK)
- HGVS:
8.
rs1491468075 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- AT>-
[Show Flanks]
- Chromosome:
- 10:106151523
(GRCh38)
10:107911281
(GRCh37)
- Canonical SPDI:
- NC_000010.11:106151522:AT:
- Gene:
- LINC02624 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0./0
(
ALFA)
-=0.000042/11
(TOPMED)
-=0.000073/10
(GnomAD)
-=0.033731/130
(ALSPAC)
-=0.035599/132
(TWINSUK)
- HGVS:
9.
rs1491467608 has merged into rs1173433767 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAAAAAAAAAA>-,A,AA,AAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 10:106167979
(GRCh38)
10:107927737
(GRCh37)
- Canonical SPDI:
- NC_000010.11:106167967:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000010.11:106167967:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000010.11:106167967:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000010.11:106167967:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000010.11:106167967:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000010.11:106167967:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000010.11:106167967:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000010.11:106167967:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000010.11:106167967:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000010.11:106167967:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:106167967:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:106167967:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:106167967:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:106167967:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:106167967:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:106167967:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:106167967:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:106167967:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000010.11:106167967:AAAAAAAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- LINC02624 (Varview)
- Functional Consequence:
- intron_variant,genic_downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000010.11:g.106167979_106167995del, NC_000010.11:g.106167980_106167995del, NC_000010.11:g.106167981_106167995del, NC_000010.11:g.106167982_106167995del, NC_000010.11:g.106167985_106167995del, NC_000010.11:g.106167986_106167995del, NC_000010.11:g.106167987_106167995del, NC_000010.11:g.106167988_106167995del, NC_000010.11:g.106167989_106167995del, NC_000010.11:g.106167991_106167995del, NC_000010.11:g.106167992_106167995del, NC_000010.11:g.106167993_106167995del, NC_000010.11:g.106167994_106167995del, NC_000010.11:g.106167995del, NC_000010.11:g.106167995dup, NC_000010.11:g.106167994_106167995dup, NC_000010.11:g.106167993_106167995dup, NC_000010.11:g.106167992_106167995dup, NC_000010.11:g.106167991_106167995dup, NC_000010.10:g.107927737_107927753del, NC_000010.10:g.107927738_107927753del, NC_000010.10:g.107927739_107927753del, NC_000010.10:g.107927740_107927753del, NC_000010.10:g.107927743_107927753del, NC_000010.10:g.107927744_107927753del, NC_000010.10:g.107927745_107927753del, NC_000010.10:g.107927746_107927753del, NC_000010.10:g.107927747_107927753del, NC_000010.10:g.107927749_107927753del, NC_000010.10:g.107927750_107927753del, NC_000010.10:g.107927751_107927753del, NC_000010.10:g.107927752_107927753del, NC_000010.10:g.107927753del, NC_000010.10:g.107927753dup, NC_000010.10:g.107927752_107927753dup, NC_000010.10:g.107927751_107927753dup, NC_000010.10:g.107927750_107927753dup, NC_000010.10:g.107927749_107927753dup
11.
rs1491362169 has merged into rs764003938 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ACACACACACACACACAC>-,AC,ACAC,ACACAC,ACACACAC,ACACACACAC,ACACACACACAC,ACACACACACACAC,ACACACACACACACAC,ACACACACACACACACACAC,ACACACACACACACACACACAC,ACACACACACACACACACACACAC,ACACACACACACACACACACACACAC,ACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACAC,ACACACACACACACACACACACACACACACACAC
[Show Flanks]
- Chromosome:
- 10:106138379
(GRCh38)
10:107898137
(GRCh37)
- Canonical SPDI:
- NC_000010.11:106138361:CACACACACACACACACACACACACACACACACAC:CACACACACACACACAC,NC_000010.11:106138361:CACACACACACACACACACACACACACACACACAC:CACACACACACACACACAC,NC_000010.11:106138361:CACACACACACACACACACACACACACACACACAC:CACACACACACACACACACAC,NC_000010.11:106138361:CACACACACACACACACACACACACACACACACAC:CACACACACACACACACACACAC,NC_000010.11:106138361:CACACACACACACACACACACACACACACACACAC:CACACACACACACACACACACACAC,NC_000010.11:106138361:CACACACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACAC,NC_000010.11:106138361:CACACACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACACAC,NC_000010.11:106138361:CACACACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACACACAC,NC_000010.11:106138361:CACACACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACACACACAC,NC_000010.11:106138361:CACACACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACACACACACACAC,NC_000010.11:106138361:CACACACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACACACACACACACAC,NC_000010.11:106138361:CACACACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACACACACACACACACAC,NC_000010.11:106138361:CACACACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACACACACACACACACACAC,NC_000010.11:106138361:CACACACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACACACACACACACACACACAC,NC_000010.11:106138361:CACACACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACACACACACACACACACACACAC,NC_000010.11:106138361:CACACACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACACACACACACACACACACACACAC,NC_000010.11:106138361:CACACACACACACACACACACACACACACACACAC:CACACACACACACACACACACACACACACACACACACACACACACACACAC
- Gene:
- LOC105378469 (Varview), LINC02624 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
CACACACACACACACACAC=0./0
(
ALFA)
-=0.0372/21
(NorthernSweden)
- HGVS:
NC_000010.11:g.106138363AC[8], NC_000010.11:g.106138363AC[9], NC_000010.11:g.106138363AC[10], NC_000010.11:g.106138363AC[11], NC_000010.11:g.106138363AC[12], NC_000010.11:g.106138363AC[13], NC_000010.11:g.106138363AC[14], NC_000010.11:g.106138363AC[15], NC_000010.11:g.106138363AC[16], NC_000010.11:g.106138363AC[18], NC_000010.11:g.106138363AC[19], NC_000010.11:g.106138363AC[20], NC_000010.11:g.106138363AC[21], NC_000010.11:g.106138363AC[22], NC_000010.11:g.106138363AC[23], NC_000010.11:g.106138363AC[24], NC_000010.11:g.106138363AC[25], NC_000010.10:g.107898121AC[8], NC_000010.10:g.107898121AC[9], NC_000010.10:g.107898121AC[10], NC_000010.10:g.107898121AC[11], NC_000010.10:g.107898121AC[12], NC_000010.10:g.107898121AC[13], NC_000010.10:g.107898121AC[14], NC_000010.10:g.107898121AC[15], NC_000010.10:g.107898121AC[16], NC_000010.10:g.107898121AC[18], NC_000010.10:g.107898121AC[19], NC_000010.10:g.107898121AC[20], NC_000010.10:g.107898121AC[21], NC_000010.10:g.107898121AC[22], NC_000010.10:g.107898121AC[23], NC_000010.10:g.107898121AC[24], NC_000010.10:g.107898121AC[25]
12.
rs1491314739 [Homo sapiens]- Variant type:
- INS
- Alleles:
- ->ACAT,AT
[Show Flanks]
- Chromosome:
- 10:106189035
(GRCh38)
10:107948794
(GRCh37)
- Canonical SPDI:
- NC_000010.11:106189035::ACAT,NC_000010.11:106189035::AT
- Gene:
- LINC02624 (Varview)
- Functional Consequence:
- 500B_downstream_variant,downstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
AT=0./0
(
ALFA)
AT=0.000007/1
(GnomAD)
- HGVS:
14.
rs1491175183 has merged into rs68166392 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TT>-,TTT,TTTT,TTTTCTTTTT,TTTTCTTTTTT,TTTTCTTTTTTTT,TTTTT,TTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 10:106187510
(GRCh38)
10:107947268
(GRCh37)
- Canonical SPDI:
- NC_000010.11:106187507:TTTT:TT,NC_000010.11:106187507:TTTT:TTTTT,NC_000010.11:106187507:TTTT:TTTTTT,NC_000010.11:106187507:TTTT:TTTTTTCTTTTT,NC_000010.11:106187507:TTTT:TTTTTTCTTTTTT,NC_000010.11:106187507:TTTT:TTTTTTCTTTTTTTT,NC_000010.11:106187507:TTTT:TTTTTTT,NC_000010.11:106187507:TTTT:TTTTTTTT,NC_000010.11:106187507:TTTT:TTTTTTTTTTT,NC_000010.11:106187507:TTTT:TTTTTTTTTTTT,NC_000010.11:106187507:TTTT:TTTTTTTTTTTTT
- Gene:
- LINC02624 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTCTTTTTT=0./0
(
ALFA)
TT=0.029/145
(1000Genomes)
TT=0.0439/26
(NorthernSweden)
TT=0.125/5
(GENOME_DK)
- HGVS:
NC_000010.11:g.106187510_106187511del, NC_000010.11:g.106187511dup, NC_000010.11:g.106187510_106187511dup, NC_000010.11:g.106187508_106187511T[6]CTTTTT[1], NC_000010.11:g.106187508_106187511T[6]CTTTTTT[1], NC_000010.11:g.106187508_106187511T[6]CTTTTTTTT[1], NC_000010.11:g.106187509_106187511dup, NC_000010.11:g.106187508_106187511dup, NC_000010.11:g.106187511_106187512insTTTTTTT, NC_000010.11:g.106187511_106187512insTTTTTTTT, NC_000010.11:g.106187511_106187512insTTTTTTTTT, NC_000010.10:g.107947268_107947269del, NC_000010.10:g.107947269dup, NC_000010.10:g.107947268_107947269dup, NC_000010.10:g.107947266_107947269T[6]CTTTTT[1], NC_000010.10:g.107947266_107947269T[6]CTTTTTT[1], NC_000010.10:g.107947266_107947269T[6]CTTTTTTTT[1], NC_000010.10:g.107947267_107947269dup, NC_000010.10:g.107947266_107947269dup, NC_000010.10:g.107947269_107947270insTTTTTTT, NC_000010.10:g.107947269_107947270insTTTTTTTT, NC_000010.10:g.107947269_107947270insTTTTTTTTT
15.
rs1491173047 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AT>-,ATAT
[Show Flanks]
- Chromosome:
- 10:106160444
(GRCh38)
10:107920202
(GRCh37)
- Canonical SPDI:
- NC_000010.11:106160441:ATAT:AT,NC_000010.11:106160441:ATAT:ATATAT
- Gene:
- LINC02624 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
ATAT=0./0
(
ALFA)
-=0.000045/6
(GnomAD)
AT=0.000477/8
(TOMMO)
-=0.001092/2
(Korea1K)
- HGVS:
17.
rs1491099167 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- CT>-
[Show Flanks]
- Chromosome:
- 10:106187512
(GRCh38)
10:107947270
(GRCh37)
- Canonical SPDI:
- NC_000010.11:106187510:TCT:T
- Gene:
- LINC02624 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0.00211/25
(
ALFA)
-=0.00005/4
(GnomAD)
-=0.16969/654
(ALSPAC)
-=0.17665/655
(TWINSUK)
- HGVS:
18.
rs1491073507 has merged into rs747634485 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TATA>-,TA,TATATA
[Show Flanks]
- Chromosome:
- 10:106172765
(GRCh38)
10:107932523
(GRCh37)
- Canonical SPDI:
- NC_000010.11:106172763:ATATA:A,NC_000010.11:106172763:ATATA:ATA,NC_000010.11:106172763:ATATA:ATATATA
- Gene:
- LINC02624 (Varview)
- Functional Consequence:
- genic_downstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
ATA=0./0
(
ALFA)
-=0.0005/6
(TOMMO)
-=0.00123/2
(Korea1K)
-=0.36785/1364
(TWINSUK)
-=0.39543/1524
(ALSPAC)
- HGVS:
19.
rs1490894143 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- T>-
[Show Flanks]
- Chromosome:
- 10:106138531
(GRCh38)
10:107898289
(GRCh37)
- Canonical SPDI:
- NC_000010.11:106138530:T:
- Gene:
- LOC105378469 (Varview), LINC02624 (Varview)
- Functional Consequence:
- 2KB_upstream_variant,upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
-=0./0
(
ALFA)
-=0.000007/1
(GnomAD)
-=0.000008/2
(TOPMED)
- HGVS:
20.
rs1490777650 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 10:106146529
(GRCh38)
10:107906287
(GRCh37)
- Canonical SPDI:
- NC_000010.11:106146528:T:C
- Gene:
- LINC02624 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000004/1
(TOPMED)
C=0.000007/1
(GnomAD)
- HGVS: