Links from Gene
Items: 1 to 20 of 26656
3.
rs1491483795 has merged into rs780283463 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- AAAAAAAAAAAA>-,A,AA,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA,AAAAAAAA,AAAAAAAAA,AAAAAAAAAA,AAAAAAAAAAA,AAAAAAAAAAAAA,AAAAAAAAAAAAAA,AAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAA,AAAAAAAAAAAAAAAAAAAAAA
[Show Flanks]
- Chromosome:
- 4:77591562
(GRCh38)
4:78512716
(GRCh37)
- Canonical SPDI:
- NC_000004.12:77591550:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAA,NC_000004.12:77591550:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAA,NC_000004.12:77591550:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAA,NC_000004.12:77591550:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000004.12:77591550:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000004.12:77591550:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000004.12:77591550:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000004.12:77591550:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA,NC_000004.12:77591550:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAA,NC_000004.12:77591550:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAA,NC_000004.12:77591550:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAA,NC_000004.12:77591550:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:77591550:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:77591550:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:77591550:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:77591550:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:77591550:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:77591550:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:77591550:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:77591550:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA,NC_000004.12:77591550:AAAAAAAAAAAAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
- Gene:
- CXCL13 (Varview), LOC105377296 (Varview)
- Functional Consequence:
- genic_upstream_transcript_variant,intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
- HGVS:
NC_000004.12:g.77591562_77591573del, NC_000004.12:g.77591563_77591573del, NC_000004.12:g.77591564_77591573del, NC_000004.12:g.77591565_77591573del, NC_000004.12:g.77591566_77591573del, NC_000004.12:g.77591567_77591573del, NC_000004.12:g.77591568_77591573del, NC_000004.12:g.77591569_77591573del, NC_000004.12:g.77591570_77591573del, NC_000004.12:g.77591571_77591573del, NC_000004.12:g.77591572_77591573del, NC_000004.12:g.77591573del, NC_000004.12:g.77591573dup, NC_000004.12:g.77591572_77591573dup, NC_000004.12:g.77591571_77591573dup, NC_000004.12:g.77591570_77591573dup, NC_000004.12:g.77591569_77591573dup, NC_000004.12:g.77591568_77591573dup, NC_000004.12:g.77591567_77591573dup, NC_000004.12:g.77591566_77591573dup, NC_000004.12:g.77591564_77591573dup, NC_000004.11:g.78512716_78512727del, NC_000004.11:g.78512717_78512727del, NC_000004.11:g.78512718_78512727del, NC_000004.11:g.78512719_78512727del, NC_000004.11:g.78512720_78512727del, NC_000004.11:g.78512721_78512727del, NC_000004.11:g.78512722_78512727del, NC_000004.11:g.78512723_78512727del, NC_000004.11:g.78512724_78512727del, NC_000004.11:g.78512725_78512727del, NC_000004.11:g.78512726_78512727del, NC_000004.11:g.78512727del, NC_000004.11:g.78512727dup, NC_000004.11:g.78512726_78512727dup, NC_000004.11:g.78512725_78512727dup, NC_000004.11:g.78512724_78512727dup, NC_000004.11:g.78512723_78512727dup, NC_000004.11:g.78512722_78512727dup, NC_000004.11:g.78512721_78512727dup, NC_000004.11:g.78512720_78512727dup, NC_000004.11:g.78512718_78512727dup
4.
rs1491437380 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- GT>-
[Show Flanks]
- Chromosome:
- 4:77525920
(GRCh38)
4:78447074
(GRCh37)
- Canonical SPDI:
- NC_000004.12:77525918:TGT:T
- Gene:
- CXCL13 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
T=0.049992/593
(
ALFA)
-=0.033557/20
(NorthernSweden)
-=0.055629/7046
(GnomAD)
-=0.130459/239
(Korea1K)
-=0.156149/579
(TWINSUK)
-=0.163467/630
(ALSPAC)
-=0.168165/2816
(TOMMO)
-=0.175/7
(GENOME_DK)
- HGVS:
8.
rs1491226700 has merged into rs1209460883 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- C>-,CC
[Show Flanks]
- Chromosome:
- 4:77539077
(GRCh38)
4:78460231
(GRCh37)
- Canonical SPDI:
- NC_000004.12:77539076:CC:C,NC_000004.12:77539076:CC:CCC
- Gene:
- CXCL13 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
CC=0.000429/7
(
ALFA)
-=0.000047/6
(GnomAD)
- HGVS:
10.
rs1491203212 has merged into rs545825685 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TTTTTTTTTTTTT>-,T,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
[Show Flanks]
- Chromosome:
- 4:77611869
(GRCh38)
4:78533023
(GRCh37)
- Canonical SPDI:
- NC_000004.12:77611860:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTT,NC_000004.12:77611860:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTT,NC_000004.12:77611860:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000004.12:77611860:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000004.12:77611860:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000004.12:77611860:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000004.12:77611860:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000004.12:77611860:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000004.12:77611860:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000004.12:77611860:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:77611860:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:77611860:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:77611860:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:77611860:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:77611860:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:77611860:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:77611860:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:77611860:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:77611860:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:77611860:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:77611860:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:77611860:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000004.12:77611860:TTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
- Gene:
- CXCL13 (Varview)
- Functional Consequence:
- downstream_transcript_variant,500B_downstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTT=0./0
(
ALFA)
-=0.0597/299
(1000Genomes)
- HGVS:
NC_000004.12:g.77611869_77611881del, NC_000004.12:g.77611870_77611881del, NC_000004.12:g.77611875_77611881del, NC_000004.12:g.77611876_77611881del, NC_000004.12:g.77611877_77611881del, NC_000004.12:g.77611878_77611881del, NC_000004.12:g.77611879_77611881del, NC_000004.12:g.77611880_77611881del, NC_000004.12:g.77611881del, NC_000004.12:g.77611881dup, NC_000004.12:g.77611880_77611881dup, NC_000004.12:g.77611879_77611881dup, NC_000004.12:g.77611878_77611881dup, NC_000004.12:g.77611877_77611881dup, NC_000004.12:g.77611876_77611881dup, NC_000004.12:g.77611875_77611881dup, NC_000004.12:g.77611874_77611881dup, NC_000004.12:g.77611873_77611881dup, NC_000004.12:g.77611872_77611881dup, NC_000004.12:g.77611871_77611881dup, NC_000004.12:g.77611870_77611881dup, NC_000004.12:g.77611865_77611881dup, NC_000004.12:g.77611881_77611882insTTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000004.11:g.78533023_78533035del, NC_000004.11:g.78533024_78533035del, NC_000004.11:g.78533029_78533035del, NC_000004.11:g.78533030_78533035del, NC_000004.11:g.78533031_78533035del, NC_000004.11:g.78533032_78533035del, NC_000004.11:g.78533033_78533035del, NC_000004.11:g.78533034_78533035del, NC_000004.11:g.78533035del, NC_000004.11:g.78533035dup, NC_000004.11:g.78533034_78533035dup, NC_000004.11:g.78533033_78533035dup, NC_000004.11:g.78533032_78533035dup, NC_000004.11:g.78533031_78533035dup, NC_000004.11:g.78533030_78533035dup, NC_000004.11:g.78533029_78533035dup, NC_000004.11:g.78533028_78533035dup, NC_000004.11:g.78533027_78533035dup, NC_000004.11:g.78533026_78533035dup, NC_000004.11:g.78533025_78533035dup, NC_000004.11:g.78533024_78533035dup, NC_000004.11:g.78533019_78533035dup, NC_000004.11:g.78533035_78533036insTTTTTTTTTTTTTTTTTTTTTTTTTT
11.
rs1491148593 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- ->CA
[Show Flanks]
- Chromosome:
- 4:77591551
(GRCh38)
4:78512706
(GRCh37)
- Canonical SPDI:
- NC_000004.12:77591551:A:ACA
- Gene:
- CXCL13 (Varview), LOC105377296 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
ACA=0./0
(
ALFA)
AC=0.000004/1
(TOPMED)
- HGVS:
12.
rs1491081093 has merged into rs201437912 [Homo sapiens]- Variant type:
- DELINS
- Alleles:
- TT>-,T,TTT,TTTT
[Show Flanks]
- Chromosome:
- 4:77610183
(GRCh38)
4:78531337
(GRCh37)
- Canonical SPDI:
- NC_000004.12:77610173:TTTTTTTTTTT:TTTTTTTTT,NC_000004.12:77610173:TTTTTTTTTTT:TTTTTTTTTT,NC_000004.12:77610173:TTTTTTTTTTT:TTTTTTTTTTTT,NC_000004.12:77610173:TTTTTTTTTTT:TTTTTTTTTTTTT
- Gene:
- CXCL13 (Varview)
- Functional Consequence:
- intron_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
TTTTTTTTTTTTT=0./0
(
ALFA)
-=0.10249/489
(1000Genomes)
T=0.1068/396
(TWINSUK)
T=0.11443/441
(ALSPAC)
T=0.125/5
(GENOME_DK)
T=0.13667/82
(NorthernSweden)
- HGVS:
13.
rs1491058463 [Homo sapiens]- Variant type:
- DEL
- Alleles:
- TC>-
[Show Flanks]
- Chromosome:
- 4:77531132
(GRCh38)
4:78452286
(GRCh37)
- Canonical SPDI:
- NC_000004.12:77531131:TC:
- Gene:
- CXCL13 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency
- MAF:
-=0.000007/1
(GnomAD)
- HGVS:
14.
rs1490918792 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 4:77604386
(GRCh38)
4:78525540
(GRCh37)
- Canonical SPDI:
- NC_000004.12:77604385:T:C
- Gene:
- CXCL13 (Varview)
- Functional Consequence:
- intron_variant,upstream_transcript_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0.000007/1
(GnomAD)
C=0.000008/2
(TOPMED)
C=0.000071/2
(TOMMO)
- HGVS:
15.
rs1490915221 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>G
[Show Flanks]
- Chromosome:
- 4:77520942
(GRCh38)
4:78442096
(GRCh37)
- Canonical SPDI:
- NC_000004.12:77520941:T:G
- Gene:
- CXCL13 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
- HGVS:
16.
rs1490908113 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 4:77552980
(GRCh38)
4:78474134
(GRCh37)
- Canonical SPDI:
- NC_000004.12:77552979:G:A
- Gene:
- CXCL13 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0./0
(
ALFA)
A=0.000007/1
(GnomAD)
- HGVS:
17.
rs1490892925 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- G>A
[Show Flanks]
- Chromosome:
- 4:77603433
(GRCh38)
4:78524587
(GRCh37)
- Canonical SPDI:
- NC_000004.12:77603432:G:A
- Gene:
- CXCL13 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa
- MAF:
A=0.000071/1
(
ALFA)
A=0.000004/1
(TOPMED)
- HGVS:
18.
rs1490887633 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- T>C
[Show Flanks]
- Chromosome:
- 4:77511143
(GRCh38)
4:78432297
(GRCh37)
- Canonical SPDI:
- NC_000004.12:77511142:T:C
- Gene:
- CXCL13 (Varview)
- Functional Consequence:
- upstream_transcript_variant,2KB_upstream_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
C=0./0
(
ALFA)
C=0./0
(GnomAD)
C=0.000004/1
(TOPMED)
C=0.000071/1
(TOMMO)
- HGVS:
19.
rs1490884964 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 4:77572904
(GRCh38)
4:78494058
(GRCh37)
- Canonical SPDI:
- NC_000004.12:77572903:A:G
- Gene:
- CXCL13 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000004/1
(TOPMED)
G=0.000007/1
(GnomAD)
A=0.5/1
(SGDP_PRJ)
- HGVS:
20.
rs1490833505 [Homo sapiens]- Variant type:
- SNV
- Alleles:
- A>G
[Show Flanks]
- Chromosome:
- 4:77516755
(GRCh38)
4:78437909
(GRCh37)
- Canonical SPDI:
- NC_000004.12:77516754:A:G
- Gene:
- CXCL13 (Varview)
- Functional Consequence:
- intron_variant,genic_upstream_transcript_variant
- Validated:
- by frequency,by alfa,by cluster
- MAF:
G=0./0
(
ALFA)
G=0.000014/2
(GnomAD)
G=0.000019/5
(TOPMED)
- HGVS: