SNP Links for Gene (Select 10775) - SNP

Warning: The NCBI web site requires JavaScript to function. more...

Links from Gene

Items: 1 to 20 of 1000

<< First< Prev

Page of 50

Next >Last >>

Select item 14915577061.

rs1491557706 has merged into rs374997767 [Homo sapiens]

Variant type:: DELINS
Alleles:: CT>- [Show Flanks]
Chromosome:: 19:29614509 (GRCh38)
19:30105416 (GRCh37)
Canonical SPDI:: NC_000019.10:29614507:TCT:T
Gene:: POP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0.30779/3651 (ALFA)
TC=0.18208/3032 (TOMMO)
TC=0.43005/787 (Korea1K)
-=0.46755/45100 (GnomAD)
-=0.47033/2355 (1000Genomes)
HGVS:: NC_000019.10:g.29614509_29614510del, NC_000019.9:g.30105416_30105417del

Select item 14915294332.

rs1491529433 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CTTTTT,CTTTTTT,CTTTTTTT,CTTTTTTTT,CTTTTTTTTT,CTTTTTTTTTT,CTTTTTTTTTTT,CTTTTTTTTTTTT,CTTTTTTTTTTTTT,CTTTTTTTTTTTTTT,CTTTTTTTTTTTTTTT,CTTTTTTTTTTTTTTTT,CTTTTTTTTTTTTTTTTTT,CTTTTTTTTTTTTTTTTTTT,CTTTTTTTTTTTTTTTTTTTT,CTTTTTTTTTTTTTTTTTTTTTT,CTTTTTTTTTTTTTTTTTTTTTTT,CTTTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 19:29608262 (GRCh38)
19:30099170 (GRCh37)
Canonical SPDI:: NC_000019.10:29608262:TTTT:TTTTCTTTTT,NC_000019.10:29608262:TTTT:TTTTCTTTTTT,NC_000019.10:29608262:TTTT:TTTTCTTTTTTT,NC_000019.10:29608262:TTTT:TTTTCTTTTTTTT,NC_000019.10:29608262:TTTT:TTTTCTTTTTTTTT,NC_000019.10:29608262:TTTT:TTTTCTTTTTTTTTT,NC_000019.10:29608262:TTTT:TTTTCTTTTTTTTTTT,NC_000019.10:29608262:TTTT:TTTTCTTTTTTTTTTTT,NC_000019.10:29608262:TTTT:TTTTCTTTTTTTTTTTTT,NC_000019.10:29608262:TTTT:TTTTCTTTTTTTTTTTTTT,NC_000019.10:29608262:TTTT:TTTTCTTTTTTTTTTTTTTT,NC_000019.10:29608262:TTTT:TTTTCTTTTTTTTTTTTTTTT,NC_000019.10:29608262:TTTT:TTTTCTTTTTTTTTTTTTTTTTT,NC_000019.10:29608262:TTTT:TTTTCTTTTTTTTTTTTTTTTTTT,NC_000019.10:29608262:TTTT:TTTTCTTTTTTTTTTTTTTTTTTTT,NC_000019.10:29608262:TTTT:TTTTCTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:29608262:TTTT:TTTTCTTTTTTTTTTTTTTTTTTTTTTT,NC_000019.10:29608262:TTTT:TTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: POP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTCTTTTTT=0./0 (ALFA)
HGVS:: NC_000019.10:g.29608263_29608266T[4]CTTTTT[1], NC_000019.10:g.29608263_29608266T[4]CTTTTTT[1], NC_000019.10:g.29608263_29608266T[4]CTTTTTTT[1], NC_000019.10:g.29608263_29608266T[4]CTTTTTTTT[1], NC_000019.10:g.29608263_29608266T[4]CTTTTTTTTT[1], NC_000019.10:g.29608263_29608266T[4]CTTTTTTTTTT[1], NC_000019.10:g.29608263_29608266T[4]CTTTTTTTTTTT[1], NC_000019.10:g.29608263_29608266T[4]CTTTTTTTTTTTT[1], NC_000019.10:g.29608263_29608266T[4]CTTTTTTTTTTTTT[1], NC_000019.10:g.29608263_29608266T[4]CTTTTTTTTTTTTTT[1], NC_000019.10:g.29608263_29608266T[4]CTTTTTTTTTTTTTTT[1], NC_000019.10:g.29608263_29608266T[4]CTTTTTTTTTTTTTTTT[1], NC_000019.10:g.29608263_29608266T[4]CTTTTTTTTTTTTTTTTTT[1], NC_000019.10:g.29608263_29608266T[4]CTTTTTTTTTTTTTTTTTTT[1], NC_000019.10:g.29608263_29608266T[4]CTTTTTTTTTTTTTTTTTTTT[1], NC_000019.10:g.29608263_29608266T[4]CTTTTTTTTTTTTTTTTTTTTTT[1], NC_000019.10:g.29608263_29608266T[4]CTTTTTTTTTTTTTTTTTTTTTTT[1], NC_000019.10:g.29608263_29608266T[4]CTTTTTTTTTTTTTTTTTTTTTTTTTTTTT[1], NC_000019.9:g.30099170_30099173T[4]CTTTTT[1], NC_000019.9:g.30099170_30099173T[4]CTTTTTT[1], NC_000019.9:g.30099170_30099173T[4]CTTTTTTT[1], NC_000019.9:g.30099170_30099173T[4]CTTTTTTTT[1], NC_000019.9:g.30099170_30099173T[4]CTTTTTTTTT[1], NC_000019.9:g.30099170_30099173T[4]CTTTTTTTTTT[1], NC_000019.9:g.30099170_30099173T[4]CTTTTTTTTTTT[1], NC_000019.9:g.30099170_30099173T[4]CTTTTTTTTTTTT[1], NC_000019.9:g.30099170_30099173T[4]CTTTTTTTTTTTTT[1], NC_000019.9:g.30099170_30099173T[4]CTTTTTTTTTTTTTT[1], NC_000019.9:g.30099170_30099173T[4]CTTTTTTTTTTTTTTT[1], NC_000019.9:g.30099170_30099173T[4]CTTTTTTTTTTTTTTTT[1], NC_000019.9:g.30099170_30099173T[4]CTTTTTTTTTTTTTTTTTT[1], NC_000019.9:g.30099170_30099173T[4]CTTTTTTTTTTTTTTTTTTT[1], NC_000019.9:g.30099170_30099173T[4]CTTTTTTTTTTTTTTTTTTTT[1], NC_000019.9:g.30099170_30099173T[4]CTTTTTTTTTTTTTTTTTTTTTT[1], NC_000019.9:g.30099170_30099173T[4]CTTTTTTTTTTTTTTTTTTTTTTT[1], NC_000019.9:g.30099170_30099173T[4]CTTTTTTTTTTTTTTTTTTTTTTTTTTTTT[1]

Select item 14915105763.

rs1491510576 [Homo sapiens]

Variant type:: DEL
Alleles:: TC>- [Show Flanks]
Chromosome:: 19:29615240 (GRCh38)
19:30106147 (GRCh37)
Canonical SPDI:: NC_000019.10:29615239:TC:
Gene:: POP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
HGVS:: NC_000019.10:g.29615240_29615241del, NC_000019.9:g.30106147_30106148del

Select item 14913278414.

rs1491327841 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->CA [Show Flanks]
Chromosome:: 19:29607468 (GRCh38)
19:30098376 (GRCh37)
Canonical SPDI:: NC_000019.10:29607468:A:ACA
Gene:: POP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: ACA=0./0 (ALFA)
AC=0.00004/1 (TOMMO)
AC=0.00097/3 (GnomAD)
HGVS:: NC_000019.10:g.29607469_29607470insCA, NC_000019.9:g.30098376_30098377insCA

Select item 14913061215.

rs1491306121 has merged into rs10625292 [Homo sapiens]

Variant type:: DELINS
Alleles:: AA>-,AAA,AAAA,AAAAA,AAAAAA,AAAAAAA [Show Flanks]
Chromosome:: 19:29607294 (GRCh38)
19:30098201 (GRCh37)
Canonical SPDI:: NC_000019.10:29607282:AAAAAAAAAAAAA:AAAAAAAAAAA,NC_000019.10:29607282:AAAAAAAAAAAAA:AAAAAAAAAAAAAA,NC_000019.10:29607282:AAAAAAAAAAAAA:AAAAAAAAAAAAAAA,NC_000019.10:29607282:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAA,NC_000019.10:29607282:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAA,NC_000019.10:29607282:AAAAAAAAAAAAA:AAAAAAAAAAAAAAAAAA
Gene:: POP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAAAAAAAAAAA=0./0 (ALFA)
AA=0.2714/1359 (1000Genomes)
HGVS:: NC_000019.10:g.29607294_29607295del, NC_000019.10:g.29607295dup, NC_000019.10:g.29607294_29607295dup, NC_000019.10:g.29607293_29607295dup, NC_000019.10:g.29607292_29607295dup, NC_000019.10:g.29607291_29607295dup, NC_000019.9:g.30098201_30098202del, NC_000019.9:g.30098202dup, NC_000019.9:g.30098201_30098202dup, NC_000019.9:g.30098200_30098202dup, NC_000019.9:g.30098199_30098202dup, NC_000019.9:g.30098198_30098202dup

Select item 14912777006.

rs1491277700 [Homo sapiens]

Variant type:: DELINS
Alleles:: ->GA [Show Flanks]
Chromosome:: 19:29607283 (GRCh38)
19:30098191 (GRCh37)
Canonical SPDI:: NC_000019.10:29607283:A:AGA
Gene:: POP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AGA=0.00017/2 (ALFA)
AG=0.03295/211 (1000Genomes)
AG=0.16667/9 (GnomAD)
HGVS:: NC_000019.10:g.29607284_29607285insGA, NC_000019.9:g.30098191_30098192insGA

Select item 14909188227.

rs1490918822 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 19:29614445 (GRCh38)
19:30105352 (GRCh37)
Canonical SPDI:: NC_000019.10:29614444:C:A
Gene:: POP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000019.10:g.29614445C>A, NC_000019.9:g.30105352C>A

Select item 14905358338.

rs1490535833 [Homo sapiens]

Variant type:: SNV:
Alleles:: A>C
Chromosome:: no mapping
Canonical SPDI:

Select item 14904648239.

rs1490464823 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 19:29607467 (GRCh38)
19:30098374 (GRCh37)
Canonical SPDI:: NC_000019.10:29607466:C:A
Gene:: POP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000014/2 (GnomAD)
HGVS:: NC_000019.10:g.29607467C>A, NC_000019.9:g.30098374C>A

Select item 149020893410.

rs1490208934 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 19:29612660 (GRCh38)
19:30103567 (GRCh37)
Canonical SPDI:: NC_000019.10:29612659:A:T
Gene:: POP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.29612660A>T, NC_000019.9:g.30103567A>T

Select item 149014426311.

rs1490144263 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 19:29606633 (GRCh38)
19:30097540 (GRCh37)
Canonical SPDI:: NC_000019.10:29606632:G:T
Gene:: POP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.29606633G>T, NC_000019.9:g.30097540G>T

Select item 148975888712.

rs1489758887 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 19:29616313 (GRCh38)
19:30107220 (GRCh37)
Canonical SPDI:: NC_000019.10:29616312:G:A
Gene:: POP4 (Varview)
Functional Consequence:: non_coding_transcript_variant,3_prime_UTR_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.29616313G>A, NC_000019.9:g.30107220G>A, NM_006627.3:c.*933G>A, NM_006627.2:c.*933G>A, NR_027368.2:n.1408G>A, NR_027368.1:n.1428G>A

Select item 148970366413.

rs1489703664 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 19:29615034 (GRCh38)
19:30105941 (GRCh37)
Canonical SPDI:: NC_000019.10:29615033:G:T
Gene:: POP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
HGVS:: NC_000019.10:g.29615034G>T, NC_000019.9:g.30105941G>T

Select item 148948250614.

rs1489482506 [Homo sapiens]

Variant type:: SNV
Alleles:: T>A [Show Flanks]
Chromosome:: 19:29613431 (GRCh38)
19:30104338 (GRCh37)
Canonical SPDI:: NC_000019.10:29613430:T:A
Gene:: POP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000019.10:g.29613431T>A, NC_000019.9:g.30104338T>A

Select item 148913462215.

rs1489134622 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:29613037 (GRCh38)
19:30103944 (GRCh37)
Canonical SPDI:: NC_000019.10:29613036:C:T
Gene:: POP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000034/9 (TOPMED)
T=0.000036/5 (GnomAD)
HGVS:: NC_000019.10:g.29613037C>T, NC_000019.9:g.30103944C>T

Select item 148909001216.

rs1489090012 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:29613128 (GRCh38)
19:30104035 (GRCh37)
Canonical SPDI:: NC_000019.10:29613127:C:T
Gene:: POP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
HGVS:: NC_000019.10:g.29613128C>T, NC_000019.9:g.30104035C>T

Select item 148895100817.

rs1488951008 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 19:29610377 (GRCh38)
19:30101284 (GRCh37)
Canonical SPDI:: NC_000019.10:29610376:A:T
Gene:: POP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: T=0.000008/1 (GnomAD_exomes)
HGVS:: NC_000019.10:g.29610377A>T, NC_000019.9:g.30101284A>T

Select item 148883051718.

rs1488830517 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 19:29610124 (GRCh38)
19:30101031 (GRCh37)
Canonical SPDI:: NC_000019.10:29610123:C:T
Gene:: POP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
T=0.000546/1 (Korea1K)
HGVS:: NC_000019.10:g.29610124C>T, NC_000019.9:g.30101031C>T

Select item 148872522119.

rs1488725221 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 19:29610640 (GRCh38)
19:30101547 (GRCh37)
Canonical SPDI:: NC_000019.10:29610639:G:A,NC_000019.10:29610639:G:C
Gene:: POP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000028/1 (ALFA)
C=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
A=0.000106/2 (TOMMO)
HGVS:: NC_000019.10:g.29610640G>A, NC_000019.10:g.29610640G>C, NC_000019.9:g.30101547G>A, NC_000019.9:g.30101547G>C

Select item 148866311620.

rs1488663116 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 19:29612705 (GRCh38)
19:30103612 (GRCh37)
Canonical SPDI:: NC_000019.10:29612704:A:G
Gene:: POP4 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000019.10:g.29612705A>G, NC_000019.9:g.30103612A>G

<< First< Prev

Page of 50

Next >Last >>

Supplemental Content

Filters: Manage Filters

Find related data

Recent activity

Clear Turn Off Turn On

SNP Links for Gene (Select 10775) (1000)
SNP

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

dbSNP

Result Filters

Validation Status

Function Class

Variation Class

Annotation

Global MAF

Custom range

Additional filters

Display Settings:

Send to: