SNP Links for Gene (Select 107984379) - SNP

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Items: 1 to 20 of 1009

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Select item 14907981231.

rs1490798123 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C,G [Show Flanks]
Chromosome:: 11:127230030 (GRCh38)
11:127099925 (GRCh37)
Canonical SPDI:: NC_000011.10:127230029:A:C,NC_000011.10:127230029:A:G
Gene:: LOC107984379 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.127230030A>C, NC_000011.10:g.127230030A>G, NC_000011.9:g.127099925A>C, NC_000011.9:g.127099925A>G

Select item 14904553212.

rs1490455321 [Homo sapiens]

Variant type:: DELINS
Alleles:: TG>- [Show Flanks]
Chromosome:: 11:127229205 (GRCh38)
11:127099100 (GRCh37)
Canonical SPDI:: NC_000011.10:127229203:GTG:G
Gene:: LOC107984379 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000641/9 (ALFA)
-=0.000314/44 (GnomAD)
-=0.000529/140 (TOPMED)
HGVS:: NC_000011.10:g.127229205_127229206del, NC_000011.9:g.127099100_127099101del

Select item 14855731673.

rs1485573167 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:127231228 (GRCh38)
11:127101123 (GRCh37)
Canonical SPDI:: NC_000011.10:127231227:G:A
Gene:: LOC107984379 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
HGVS:: NC_000011.10:g.127231228G>A, NC_000011.9:g.127101123G>A

Select item 14855521324.

rs1485552132 [Homo sapiens]

Variant type:: SNV
Alleles:: T>G [Show Flanks]
Chromosome:: 11:127232152 (GRCh38)
11:127102047 (GRCh37)
Canonical SPDI:: NC_000011.10:127232151:T:G
Gene:: LOC107984379 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0.000071/1 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000014/2 (GnomAD)
HGVS:: NC_000011.10:g.127232152T>G, NC_000011.9:g.127102047T>G

Select item 14854482045.

rs1485448204 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G,T [Show Flanks]
Chromosome:: 11:127228521 (GRCh38)
11:127098416 (GRCh37)
Canonical SPDI:: NC_000011.10:127228520:A:G,NC_000011.10:127228520:A:T
Gene:: LOC107984379 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.127228521A>G, NC_000011.10:g.127228521A>T, NC_000011.9:g.127098416A>G, NC_000011.9:g.127098416A>T

Select item 14845252036.

rs1484525203 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:127228133 (GRCh38)
11:127098028 (GRCh37)
Canonical SPDI:: NC_000011.10:127228132:G:A
Gene:: LOC107984379 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.127228133G>A, NC_000011.9:g.127098028G>A

Select item 14839172827.

rs1483917282 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 11:127231067 (GRCh38)
11:127100962 (GRCh37)
Canonical SPDI:: NC_000011.10:127231066:C:A
Gene:: LOC107984379 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000007/1 (GnomAD)
A=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.127231067C>A, NC_000011.9:g.127100962C>A

Select item 14837278018.

rs1483727801 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A,C [Show Flanks]
Chromosome:: 11:127231992 (GRCh38)
11:127101887 (GRCh37)
Canonical SPDI:: NC_000011.10:127231991:G:A,NC_000011.10:127231991:G:C
Gene:: LOC107984379 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.127231992G>A, NC_000011.10:g.127231992G>C, NC_000011.9:g.127101887G>A, NC_000011.9:g.127101887G>C

Select item 14822835949.

rs1482283594 has merged into rs1367075845 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>-,GG [Show Flanks]
Chromosome:: 11:127229950 (GRCh38)
11:127099845 (GRCh37)
Canonical SPDI:: NC_000011.10:127229949:GGGGGG:GGGGG,NC_000011.10:127229949:GGGGGG:GGGGGGG
Gene:: LOC107984379 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: GGGGGGG=0./0 (ALFA)
-=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.127229955del, NC_000011.10:g.127229955dup, NC_000011.9:g.127099850del, NC_000011.9:g.127099850dup, XR_001748080.1:n.31del, XR_001748080.1:n.31dup

Select item 148204060210.

rs1482040602 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 11:127229903 (GRCh38)
11:127099798 (GRCh37)
Canonical SPDI:: NC_000011.10:127229902:C:T
Gene:: LOC107984379 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.127229903C>T, NC_000011.9:g.127099798C>T

Select item 148199771911.

rs1481997719 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:127228809 (GRCh38)
11:127098704 (GRCh37)
Canonical SPDI:: NC_000011.10:127228808:G:C
Gene:: LOC107984379 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
C=0.000312/2 (1000Genomes)
HGVS:: NC_000011.10:g.127228809G>C, NC_000011.9:g.127098704G>C

Select item 148199138612.

rs1481991386 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 11:127230970 (GRCh38)
11:127100865 (GRCh37)
Canonical SPDI:: NC_000011.10:127230969:G:T
Gene:: LOC107984379 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000011.10:g.127230970G>T, NC_000011.9:g.127100865G>T

Select item 148121258513.

rs1481212585 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 11:127228504 (GRCh38)
11:127098399 (GRCh37)
Canonical SPDI:: NC_000011.10:127228503:C:G,NC_000011.10:127228503:C:T
Gene:: LOC107984379 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.00004/1 (TOMMO)
T=0.00068/2 (KOREAN)
HGVS:: NC_000011.10:g.127228504C>G, NC_000011.10:g.127228504C>T, NC_000011.9:g.127098399C>G, NC_000011.9:g.127098399C>T

Select item 148115862614.

rs1481158626 has merged into rs57092906 [Homo sapiens]

Variant type:: DELINS
Alleles:: CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC>-,CTTCCTTCCTTC,CTTCCTTCCTTCCTTC,CTTCCTTCCTTCCTTCCTTC,CTTCCTTCCTTCCTTCCTTCCTTC,CTTCCTTCCTTCCTTCCTTCCTTCCTTC,CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC,CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC,CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC,CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC,CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC,CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC,CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC,CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC,CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC [Show Flanks]
Chromosome:: 11:127229444 (GRCh38)
11:127099339 (GRCh37)
Canonical SPDI:: NC_000011.10:127229428:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC:TTCCTTCCTTCCTTC,NC_000011.10:127229428:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC:TTCCTTCCTTCCTTCCTTCCTTCCTTC,NC_000011.10:127229428:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC,NC_000011.10:127229428:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC,NC_000011.10:127229428:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC,NC_000011.10:127229428:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC,NC_000011.10:127229428:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC,NC_000011.10:127229428:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC,NC_000011.10:127229428:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC,NC_000011.10:127229428:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC,NC_000011.10:127229428:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC,NC_000011.10:127229428:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC,NC_000011.10:127229428:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC,NC_000011.10:127229428:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC,NC_000011.10:127229428:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC:TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC
Gene:: LOC107984379 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC=0./0 (ALFA)
HGVS:: NC_000011.10:g.127229432CTTC[3], NC_000011.10:g.127229432CTTC[6], NC_000011.10:g.127229432CTTC[7], NC_000011.10:g.127229432CTTC[8], NC_000011.10:g.127229432CTTC[9], NC_000011.10:g.127229432CTTC[10], NC_000011.10:g.127229432CTTC[11], NC_000011.10:g.127229432CTTC[12], NC_000011.10:g.127229432CTTC[13], NC_000011.10:g.127229432CTTC[15], NC_000011.10:g.127229432CTTC[16], NC_000011.10:g.127229432CTTC[17], NC_000011.10:g.127229432CTTC[18], NC_000011.10:g.127229432CTTC[19], NC_000011.10:g.127229432CTTC[20], NC_000011.9:g.127099327CTTC[3], NC_000011.9:g.127099327CTTC[6], NC_000011.9:g.127099327CTTC[7], NC_000011.9:g.127099327CTTC[8], NC_000011.9:g.127099327CTTC[9], NC_000011.9:g.127099327CTTC[10], NC_000011.9:g.127099327CTTC[11], NC_000011.9:g.127099327CTTC[12], NC_000011.9:g.127099327CTTC[13], NC_000011.9:g.127099327CTTC[15], NC_000011.9:g.127099327CTTC[16], NC_000011.9:g.127099327CTTC[17], NC_000011.9:g.127099327CTTC[18], NC_000011.9:g.127099327CTTC[19], NC_000011.9:g.127099327CTTC[20]

Select item 148069885615.

rs1480698856 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 11:127228886 (GRCh38)
11:127098781 (GRCh37)
Canonical SPDI:: NC_000011.10:127228885:T:C
Gene:: LOC107984379 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.127228886T>C, NC_000011.9:g.127098781T>C

Select item 147952519916.

rs1479525199 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 11:127232202 (GRCh38)
11:127102097 (GRCh37)
Canonical SPDI:: NC_000011.10:127232201:A:T
Gene:: LOC107984379 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.127232202A>T, NC_000011.9:g.127102097A>T

Select item 147847529517.

rs1478475295 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 11:127228933 (GRCh38)
11:127098828 (GRCh37)
Canonical SPDI:: NC_000011.10:127228932:A:T
Gene:: LOC107984379 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000011.10:g.127228933A>T, NC_000011.9:g.127098828A>T

Select item 147819811618.

rs1478198116 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 11:127228014 (GRCh38)
11:127097909 (GRCh37)
Canonical SPDI:: NC_000011.10:127228013:G:A
Gene:: LOC107984379 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.127228014G>A, NC_000011.9:g.127097909G>A

Select item 147799082019.

rs1477990820 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 11:127229697 (GRCh38)
11:127099592 (GRCh37)
Canonical SPDI:: NC_000011.10:127229696:G:C
Gene:: LOC107984379 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.127229697G>C, NC_000011.9:g.127099592G>C

Select item 147794188720.

rs1477941887 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C,G [Show Flanks]
Chromosome:: 11:127230717 (GRCh38)
11:127100612 (GRCh37)
Canonical SPDI:: NC_000011.10:127230716:T:C,NC_000011.10:127230716:T:G
Gene:: LOC107984379 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
C=0.000007/1 (GnomAD)
HGVS:: NC_000011.10:g.127230717T>C, NC_000011.10:g.127230717T>G, NC_000011.9:g.127100612T>C, NC_000011.9:g.127100612T>G

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