SNP Links for Gene (Select 107986131) - SNP

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Select item 14914037541.

rs1491403754 [Homo sapiens]

Variant type:: SNV:
Alleles:: ->GTTTTTTT
Chromosome:: no mapping
Canonical SPDI:

Select item 14913123222.

rs1491312322 has merged into rs1158987417 [Homo sapiens]

Variant type:: DELINS
Alleles:: TTTTTTTTTTTTTT>-,TT,TTT,TTTT,TTTTT,TTTTTT,TTTTTTT,TTTTTTTT,TTTTTTTTT,TTTTTTTTTT,TTTTTTTTTTT,TTTTTTTTTTTT,TTTTTTTTTTTTT,TTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT [Show Flanks]
Chromosome:: 3:130152910 (GRCh38)
3:129871753 (GRCh37)
Canonical SPDI:: NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT,NC_000003.12:130152901:TTTTTTTTTTTTTTTTTTTTTT:TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
Gene:: LOC107986131 (Varview)
Functional Consequence:: 2KB_upstream_variant,upstream_transcript_variant
Validated:: by frequency,by alfa,by cluster
MAF:: TTTTTTTT=0./0 (ALFA)
HGVS:: NC_000003.12:g.130152910_130152923del, NC_000003.12:g.130152912_130152923del, NC_000003.12:g.130152913_130152923del, NC_000003.12:g.130152914_130152923del, NC_000003.12:g.130152915_130152923del, NC_000003.12:g.130152916_130152923del, NC_000003.12:g.130152917_130152923del, NC_000003.12:g.130152918_130152923del, NC_000003.12:g.130152919_130152923del, NC_000003.12:g.130152920_130152923del, NC_000003.12:g.130152921_130152923del, NC_000003.12:g.130152922_130152923del, NC_000003.12:g.130152923del, NC_000003.12:g.130152923dup, NC_000003.12:g.130152922_130152923dup, NC_000003.12:g.130152921_130152923dup, NC_000003.12:g.130152920_130152923dup, NC_000003.12:g.130152919_130152923dup, NC_000003.12:g.130152918_130152923dup, NC_000003.12:g.130152917_130152923dup, NC_000003.12:g.130152916_130152923dup, NC_000003.12:g.130152915_130152923dup, NC_000003.12:g.130152914_130152923dup, NC_000003.12:g.130152913_130152923dup, NC_000003.12:g.130152912_130152923dup, NC_000003.12:g.130152911_130152923dup, NC_000003.12:g.130152910_130152923dup, NC_000003.12:g.130152909_130152923dup, NC_000003.12:g.130152908_130152923dup, NC_000003.12:g.130152907_130152923dup, NC_000003.12:g.130152905_130152923dup, NC_000003.12:g.130152904_130152923dup, NC_000003.12:g.130152903_130152923dup, NC_000003.12:g.130152923_130152924insTTTTTTTTTTTTTTTTTTTTTTTT, NC_000003.12:g.130152923_130152924insTTTTTTTTTTTTTTTTTTTTTTTTT, NC_000003.11:g.129871753_129871766del, NC_000003.11:g.129871755_129871766del, NC_000003.11:g.129871756_129871766del, NC_000003.11:g.129871757_129871766del, NC_000003.11:g.129871758_129871766del, NC_000003.11:g.129871759_129871766del, NC_000003.11:g.129871760_129871766del, NC_000003.11:g.129871761_129871766del, NC_000003.11:g.129871762_129871766del, NC_000003.11:g.129871763_129871766del, NC_000003.11:g.129871764_129871766del, NC_000003.11:g.129871765_129871766del, NC_000003.11:g.129871766del, NC_000003.11:g.129871766dup, NC_000003.11:g.129871765_129871766dup, NC_000003.11:g.129871764_129871766dup, NC_000003.11:g.129871763_129871766dup, NC_000003.11:g.129871762_129871766dup, NC_000003.11:g.129871761_129871766dup, NC_000003.11:g.129871760_129871766dup, NC_000003.11:g.129871759_129871766dup, NC_000003.11:g.129871758_129871766dup, NC_000003.11:g.129871757_129871766dup, NC_000003.11:g.129871756_129871766dup, NC_000003.11:g.129871755_129871766dup, NC_000003.11:g.129871754_129871766dup, NC_000003.11:g.129871753_129871766dup, NC_000003.11:g.129871752_129871766dup, NC_000003.11:g.129871751_129871766dup, NC_000003.11:g.129871750_129871766dup, NC_000003.11:g.129871748_129871766dup, NC_000003.11:g.129871747_129871766dup, NC_000003.11:g.129871746_129871766dup, NC_000003.11:g.129871766_129871767insTTTTTTTTTTTTTTTTTTTTTTTT, NC_000003.11:g.129871766_129871767insTTTTTTTTTTTTTTTTTTTTTTTTT

Select item 14905135493.

rs1490513549 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 3:130151843 (GRCh38)
3:129870686 (GRCh37)
Canonical SPDI:: NC_000003.12:130151842:G:C
Gene:: LOC107986131 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0.000071/1 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000021/3 (GnomAD)
HGVS:: NC_000003.12:g.130151843G>C, NC_000003.11:g.129870686G>C

Select item 14903828524.

rs1490382852 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 3:130154633 (GRCh38)
3:129873476 (GRCh37)
Canonical SPDI:: NC_000003.12:130154632:G:C
Gene:: LOC107986131 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000007/1 (GnomAD)
C=0.000008/2 (TOPMED)
HGVS:: NC_000003.12:g.130154633G>C, NC_000003.11:g.129873476G>C

Select item 14903678375.

rs1490367837 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:130153881 (GRCh38)
3:129872724 (GRCh37)
Canonical SPDI:: NC_000003.12:130153880:T:C
Gene:: LOC107986131 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.130153881T>C, NC_000003.11:g.129872724T>C

Select item 14902157386.

rs1490215738 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 3:130154299 (GRCh38)
3:129873142 (GRCh37)
Canonical SPDI:: NC_000003.12:130154298:G:T
Gene:: LOC107986131 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.130154299G>T, NC_000003.11:g.129873142G>T

Select item 14902000187.

rs1490200018 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 3:130153543 (GRCh38)
3:129872386 (GRCh37)
Canonical SPDI:: NC_000003.12:130153542:G:T
Gene:: LOC107986131 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0.000071/1 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.130153543G>T, NC_000003.11:g.129872386G>T, XR_001740905.2:n.370G>T, XR_001740905.1:n.368G>T

Select item 14897556238.

rs1489755623 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:130155446 (GRCh38)
3:129874289 (GRCh37)
Canonical SPDI:: NC_000003.12:130155445:C:T
Gene:: LOC107986131 (Varview)
Functional Consequence:: non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.130155446C>T, NC_000003.11:g.129874289C>T, XR_001740905.2:n.593C>T, XR_001740905.1:n.591C>T

Select item 14883448209.

rs1488344820 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A [Show Flanks]
Chromosome:: 3:130152303 (GRCh38)
3:129871146 (GRCh37)
Canonical SPDI:: NC_000003.12:130152302:C:A
Gene:: LOC107986131 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000008/2 (TOPMED)
HGVS:: NC_000003.12:g.130152303C>A, NC_000003.11:g.129871146C>A

Select item 148770533610.

rs1487705336 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:130154653 (GRCh38)
3:129873496 (GRCh37)
Canonical SPDI:: NC_000003.12:130154652:C:T
Gene:: LOC107986131 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000015/4 (TOPMED)
HGVS:: NC_000003.12:g.130154653C>T, NC_000003.11:g.129873496C>T

Select item 148686654911.

rs1486866549 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:130151745 (GRCh38)
3:129870588 (GRCh37)
Canonical SPDI:: NC_000003.12:130151744:G:A
Gene:: LOC107986131 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.130151745G>A, NC_000003.11:g.129870588G>A

Select item 148657566512.

rs1486575665 [Homo sapiens]

Variant type:: SNV
Alleles:: C>A,G,T [Show Flanks]
Chromosome:: 3:130151848 (GRCh38)
3:129870691 (GRCh37)
Canonical SPDI:: NC_000003.12:130151847:C:A,NC_000003.12:130151847:C:G,NC_000003.12:130151847:C:T
Gene:: LOC107986131 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000003.12:g.130151848C>A, NC_000003.12:g.130151848C>G, NC_000003.12:g.130151848C>T, NC_000003.11:g.129870691C>A, NC_000003.11:g.129870691C>G, NC_000003.11:g.129870691C>T

Select item 148636872313.

rs1486368723 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C [Show Flanks]
Chromosome:: 3:130151662 (GRCh38)
3:129870505 (GRCh37)
Canonical SPDI:: NC_000003.12:130151661:G:C
Gene:: LOC107986131 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000003.12:g.130151662G>C, NC_000003.11:g.129870505G>C

Select item 148627526414.

rs1486275264 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G,T [Show Flanks]
Chromosome:: 3:130155159 (GRCh38)
3:129874002 (GRCh37)
Canonical SPDI:: NC_000003.12:130155158:C:G,NC_000003.12:130155158:C:T
Gene:: LOC107986131 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0.000054/1 (ALFA)
G=0.000008/2 (TOPMED)
HGVS:: NC_000003.12:g.130155159C>G, NC_000003.12:g.130155159C>T, NC_000003.11:g.129874002C>G, NC_000003.11:g.129874002C>T

Select item 148522963015.

rs1485229630 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:130151373 (GRCh38)
3:129870216 (GRCh37)
Canonical SPDI:: NC_000003.12:130151372:G:A
Gene:: LOC107986131 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000011/3 (TOPMED)
HGVS:: NC_000003.12:g.130151373G>A, NC_000003.11:g.129870216G>A

Select item 148464458916.

rs1484644589 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:130154459 (GRCh38)
3:129873302 (GRCh37)
Canonical SPDI:: NC_000003.12:130154458:C:T
Gene:: LOC107986131 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000036/5 (GnomAD)
HGVS:: NC_000003.12:g.130154459C>T, NC_000003.11:g.129873302C>T

Select item 148434836917.

rs1484348369 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 3:130152816 (GRCh38)
3:129871659 (GRCh37)
Canonical SPDI:: NC_000003.12:130152815:G:A
Gene:: LOC107986131 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: A=0./0 (ALFA)
A=0.000043/6 (GnomAD)
HGVS:: NC_000003.12:g.130152816G>A, NC_000003.11:g.129871659G>A

Select item 148429012918.

rs1484290129 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 3:130152983 (GRCh38)
3:129871826 (GRCh37)
Canonical SPDI:: NC_000003.12:130152982:C:T
Gene:: LOC107986131 (Varview)
Functional Consequence:: upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/1 (GnomAD)
HGVS:: NC_000003.12:g.130152983C>T, NC_000003.11:g.129871826C>T

Select item 148413257919.

rs1484132579 [Homo sapiens]

Variant type:: SNV
Alleles:: G>C,T [Show Flanks]
Chromosome:: 3:130154445 (GRCh38)
3:129873288 (GRCh37)
Canonical SPDI:: NC_000003.12:130154444:G:C,NC_000003.12:130154444:G:T
Gene:: LOC107986131 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000003.12:g.130154445G>C, NC_000003.12:g.130154445G>T, NC_000003.11:g.129873288G>C, NC_000003.11:g.129873288G>T

Select item 148367169820.

rs1483671698 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 3:130156083 (GRCh38)
3:129874926 (GRCh37)
Canonical SPDI:: NC_000003.12:130156082:T:C
Gene:: LOC107986131 (Varview)
Functional Consequence:: downstream_transcript_variant,500B_downstream_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000011/3 (TOPMED)
C=0.000014/2 (GnomAD)
C=0.000035/1 (TOMMO)
HGVS:: NC_000003.12:g.130156083T>C, NC_000003.11:g.129874926T>C

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