SNP Links for Gene (Select 107986320) - SNP

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Items: 1 to 20 of 3823

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Select item 14915560441.

rs1491556044 [Homo sapiens]

Variant type:: INS
Alleles:: ->C [Show Flanks]
Chromosome:: 4:149264133 (GRCh38)
4:150185286 (GRCh37)
Canonical SPDI:: NC_000004.12:149264133::C
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000008/2 (TOPMED)
C=0.000014/2 (GnomAD)
HGVS:: NC_000004.12:g.149264133_149264134insC, NC_000004.11:g.150185285_150185286insC

Select item 14911325162.

rs1491132516 has merged into rs370427405 [Homo sapiens]

Variant type:: DELINS
Alleles:: AA>-,A,AAA [Show Flanks]
Chromosome:: 4:149264140 (GRCh38)
4:150185292 (GRCh37)
Canonical SPDI:: NC_000004.12:149264132:AAAAAAAAA:AAAAAAA,NC_000004.12:149264132:AAAAAAAAA:AAAAAAAA,NC_000004.12:149264132:AAAAAAAAA:AAAAAAAAAA
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: AAAAAAAA=0./0 (ALFA)
-=0.00006/1 (TOMMO)
HGVS:: NC_000004.12:g.149264140_149264141del, NC_000004.12:g.149264141del, NC_000004.12:g.149264141dup, NC_000004.11:g.150185292_150185293del, NC_000004.11:g.150185293del, NC_000004.11:g.150185293dup

Select item 14909980663.

rs1490998066 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:149259116 (GRCh38)
4:150180268 (GRCh37)
Canonical SPDI:: NC_000004.12:149259115:C:T
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000014/2 (GnomAD)
T=0.000035/1 (TOMMO)
HGVS:: NC_000004.12:g.149259116C>T, NC_000004.11:g.150180268C>T

Select item 14903695194.

rs1490369519 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:149252146 (GRCh38)
4:150173298 (GRCh37)
Canonical SPDI:: NC_000004.12:149252145:G:A
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0./0 (ALFA)
A=0.000004/1 (TOPMED)
A=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.149252146G>A, NC_000004.11:g.150173298G>A

Select item 14903125975.

rs1490312597 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:149251417 (GRCh38)
4:150172569 (GRCh37)
Canonical SPDI:: NC_000004.12:149251416:T:C
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000049/13 (TOPMED)
HGVS:: NC_000004.12:g.149251417T>C, NC_000004.11:g.150172569T>C

Select item 14902628136.

rs1490262813 [Homo sapiens]

Variant type:: SNV
Alleles:: A>T [Show Flanks]
Chromosome:: 4:149252530 (GRCh38)
4:150173682 (GRCh37)
Canonical SPDI:: NC_000004.12:149252529:A:T
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
T=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.149252530A>T, NC_000004.11:g.150173682A>T

Select item 14901793987.

rs1490179398 [Homo sapiens]

Variant type:: SNV
Alleles:: A>G [Show Flanks]
Chromosome:: 4:149259583 (GRCh38)
4:150180735 (GRCh37)
Canonical SPDI:: NC_000004.12:149259582:A:G
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
G=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.149259583A>G, NC_000004.11:g.150180735A>G

Select item 14899226558.

rs1489922655 [Homo sapiens]

Variant type:: SNV
Alleles:: T>C [Show Flanks]
Chromosome:: 4:149249761 (GRCh38)
4:150170913 (GRCh37)
Canonical SPDI:: NC_000004.12:149249760:T:C
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency
MAF:: C=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.149249761T>C, NC_000004.11:g.150170913T>C

Select item 14894187159.

rs1489418715 [Homo sapiens]

Variant type:: SNV
Alleles:: G>T [Show Flanks]
Chromosome:: 4:149262287 (GRCh38)
4:150183439 (GRCh37)
Canonical SPDI:: NC_000004.12:149262286:G:T
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.149262287G>T, NC_000004.11:g.150183439G>T

Select item 148939456310.

rs1489394563 [Homo sapiens]

Variant type:: DEL
Alleles:: A>- [Show Flanks]
Chromosome:: 4:149265277 (GRCh38)
4:150186429 (GRCh37)
Canonical SPDI:: NC_000004.12:149265276:A:
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant,upstream_transcript_variant,2KB_upstream_variant
Validated:: by frequency,by alfa
MAF:: -=0./0 (ALFA)
-=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.149265277del, NC_000004.11:g.150186429del

Select item 148925026311.

rs1489250263 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 4:149258027 (GRCh38)
4:150179179 (GRCh37)
Canonical SPDI:: NC_000004.12:149258026:A:C
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
C=0.000007/1 (GnomAD)
HGVS:: NC_000004.12:g.149258027A>C, NC_000004.11:g.150179179A>C

Select item 148845792512.

rs1488457925 [Homo sapiens]

Variant type:: SNV
Alleles:: G>A [Show Flanks]
Chromosome:: 4:149250564 (GRCh38)
4:150171716 (GRCh37)
Canonical SPDI:: NC_000004.12:149250563:G:A
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: A=0.000071/1 (ALFA)
A=0.000019/5 (TOPMED)
A=0.000021/3 (GnomAD)
HGVS:: NC_000004.12:g.149250564G>A, NC_000004.11:g.150171716G>A

Select item 148840274913.

rs1488402749 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 4:149257115 (GRCh38)
4:150178267 (GRCh37)
Canonical SPDI:: NC_000004.12:149257114:A:C
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
C=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.149257115A>C, NC_000004.11:g.150178267A>C

Select item 148834237614.

rs1488342376 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:149249480 (GRCh38)
4:150170632 (GRCh37)
Canonical SPDI:: NC_000004.12:149249479:C:T
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000008/2 (TOPMED)
HGVS:: NC_000004.12:g.149249480C>T, NC_000004.11:g.150170632C>T

Select item 148825832915.

rs1488258329 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:149253618 (GRCh38)
4:150174770 (GRCh37)
Canonical SPDI:: NC_000004.12:149253617:C:T
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa,by cluster
MAF:: T=0./0 (ALFA)
T=0.000007/1 (GnomAD)
T=0.000019/5 (TOPMED)
HGVS:: NC_000004.12:g.149253618C>T, NC_000004.11:g.150174770C>T

Select item 148820232516.

rs1488202325 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:149254316 (GRCh38)
4:150175468 (GRCh37)
Canonical SPDI:: NC_000004.12:149254315:C:T
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant,non_coding_transcript_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000011/3 (TOPMED)
HGVS:: NC_000004.12:g.149254316C>T, NC_000004.11:g.150175468C>T, XR_001741885.1:n.407G>A

Select item 148807718617.

rs1488077186 [Homo sapiens]

Variant type:: DELINS
Alleles:: G>- [Show Flanks]
Chromosome:: 4:149257526 (GRCh38)
4:150178678 (GRCh37)
Canonical SPDI:: NC_000004.12:149257525:GGG:GG
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: GG=0./0 (ALFA)
-=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.149257528del, NC_000004.11:g.150178680del

Select item 148806013118.

rs1488060131 [Homo sapiens]

Variant type:: SNV
Alleles:: C>T [Show Flanks]
Chromosome:: 4:149258531 (GRCh38)
4:150179683 (GRCh37)
Canonical SPDI:: NC_000004.12:149258530:C:T
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: T=0./0 (ALFA)
T=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.149258531C>T, NC_000004.11:g.150179683C>T

Select item 148796962119.

rs1487969621 [Homo sapiens]

Variant type:: SNV
Alleles:: C>G [Show Flanks]
Chromosome:: 4:149261788 (GRCh38)
4:150182940 (GRCh37)
Canonical SPDI:: NC_000004.12:149261787:C:G
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: G=0./0 (ALFA)
G=0.000004/1 (TOPMED)
HGVS:: NC_000004.12:g.149261788C>G, NC_000004.11:g.150182940C>G

Select item 148788383220.

rs1487883832 [Homo sapiens]

Variant type:: SNV
Alleles:: A>C [Show Flanks]
Chromosome:: 4:149250184 (GRCh38)
4:150171336 (GRCh37)
Canonical SPDI:: NC_000004.12:149250183:A:C
Gene:: LINC02355 (Varview), LOC107986320 (Varview)
Functional Consequence:: intron_variant
Validated:: by frequency,by alfa
MAF:: C=0./0 (ALFA)
HGVS:: NC_000004.12:g.149250184A>C, NC_000004.11:g.150171336A>C

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